Miyakogusa Predicted Gene

Lj1g3v3354490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3354490.1 gi|34495198|emb|AJ575747.1|.path2.1
         (507 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g072020.1 | arginine decarboxylase | HC | chr4:27309255-27...   736   0.0  
Medtr7g096560.1 | pyridoxal-binding domain pyridoxal-dependent d...    85   2e-16
Medtr2g010500.1 | pyridoxal-binding domain pyridoxal-dependent d...    84   4e-16
Medtr4g060430.1 | pyridoxal-binding domain pyridoxal-dependent d...    83   6e-16
Medtr3g113910.1 | pyridoxal-binding domain pyridoxal-dependent d...    82   1e-15

>Medtr4g072020.1 | arginine decarboxylase | HC |
           chr4:27309255-27312345 | 20130731
          Length = 730

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/542 (69%), Positives = 431/542 (79%), Gaps = 38/542 (7%)

Query: 1   MAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKMH 60
           +AMSCLCKGN EA LICNGFKD+EYISLAL ARKLALNSVIVLEQEEE+D+++++SNK+ 
Sbjct: 192 LAMSCLCKGNREAFLICNGFKDSEYISLALIARKLALNSVIVLEQEEELDMVVEISNKLC 251

Query: 61  IRPVIGMRAKLRTKHSGHFGGTSGERGKFGLTTAQILRVVKKLEHAGMLDCLQLLHFHIG 120
           IRPVIG+RAKLRTKHSGHFG TSG++GKFGLTT QILRVVKKLE   MLDCLQLLHFHIG
Sbjct: 252 IRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDMLDCLQLLHFHIG 311

Query: 121 SQIPSTALLADGVGEAAQIYCELVRLGAQMRVXXXXXXXXXXXXXTKSSDSDISVGYGLQ 180
           SQIP+T LLADGVGEAAQIYCEL+RLGAQMRV             +KSSDSD+SV YGL+
Sbjct: 312 SQIPTTELLADGVGEAAQIYCELLRLGAQMRVLYIGGGLGIDYDGSKSSDSDLSVAYGLE 371

Query: 181 EYATAVVRAVQGVCDRRSIKHPVICSESGRAIVSHHSVLVFEAVGASSYGAPPAFSSLAL 240
           EYA AVV AV+ VCDRR++KHPVICSESGRAIVSHHSVL+FEA+GASS  + P+ SS+ L
Sbjct: 372 EYAAAVVHAVKYVCDRRNVKHPVICSESGRAIVSHHSVLIFEAIGASSK-SAPSLSSIGL 430

Query: 241 QYLVEGLSEEARADYRNLSDAAIRGEHETCLLYTEEMKRRCVEEFKQGLLGMEELAGVEG 300
           QYL EGLSEEA ADY+N+S A + G+HE CLLYT++ K+ CVE+FKQG LG+E+LA V+G
Sbjct: 431 QYLGEGLSEEALADYQNISAATLHGDHEACLLYTDQFKKHCVEQFKQGTLGIEQLAAVDG 490

Query: 301 LCDLVRKTVGEADPVRRYHVNLSIFTSIPDVWSIDQVFPIIPIHRLDEKPTVKGILSDLT 360
           LCDL+ +T+G  D VR+YH+NLS+FTSIPD WSIDQ+FPIIPIHRLDEKPT +GILSDLT
Sbjct: 491 LCDLITETIGVKDQVRKYHMNLSVFTSIPDFWSIDQLFPIIPIHRLDEKPTARGILSDLT 550

Query: 361 CDSDGKIDKFINGESSLAMHELEG-GRKYYLGMFLGGAYEEALGGYHNLFGGPSVVRVLQ 419
           CDSDGKIDKFI GESSL +HELEG G  YYLGMFLGGAYEEALGG HNLFGGPSVVRVLQ
Sbjct: 551 CDSDGKIDKFIGGESSLPLHELEGHGGGYYLGMFLGGAYEEALGGLHNLFGGPSVVRVLQ 610

Query: 420 SEGPHSFAVTRAMPGPSNGDVLRVMQHQPELMFETLKHRAEESV--HDDEXXXXXXXXXX 477
           S+GPH FAVTRA+ GPS+ DVLRVMQH+P+LMFETLKHRA E    HDD+          
Sbjct: 611 SDGPHGFAVTRAVAGPSSADVLRVMQHEPQLMFETLKHRALEFCGQHDDDSVVGAAGLAN 670

Query: 478 --XRSFHNMPYLVTAA------------------------------DHAGEDEHDQWSYC 505
              RSF NMPYLV+++                                AGEDEH  WSYC
Sbjct: 671 CLARSFDNMPYLVSSSACCLNAVTNNDGFYYCSGDDFSADSASAATSVAGEDEH--WSYC 728

Query: 506 IA 507
            A
Sbjct: 729 CA 730


>Medtr7g096560.1 | pyridoxal-binding domain pyridoxal-dependent
           decarboxylase | LC | chr7:38743177-38743754 | 20130731
          Length = 146

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 6/62 (9%)

Query: 1   MAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKMH 60
           +A+SCLCKGN EA L+CNGFKD       L  RKLALN VI LEQEEE+D+++++SNK++
Sbjct: 88  LALSCLCKGNREAFLVCNGFKDN------LVGRKLALNGVIALEQEEELDMVVEISNKIY 141

Query: 61  IR 62
           IR
Sbjct: 142 IR 143


>Medtr2g010500.1 | pyridoxal-binding domain pyridoxal-dependent
           decarboxylase | LC | chr2:2411249-2411967 | 20130731
          Length = 154

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 6/62 (9%)

Query: 1   MAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKMH 60
           +A+SCLCKGN EA L+CNGFKD       L  RKLALN VI LEQEEE+++++++SNK++
Sbjct: 79  LALSCLCKGNREAFLVCNGFKDN------LVGRKLALNGVIALEQEEELNMVVEISNKLY 132

Query: 61  IR 62
           IR
Sbjct: 133 IR 134


>Medtr4g060430.1 | pyridoxal-binding domain pyridoxal-dependent
           decarboxylase | LC | chr4:22205559-22204575 | 20130731
          Length = 142

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 6/62 (9%)

Query: 1   MAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKMH 60
           +A+SCLCKGN EA L+CNGFKD       L  RKLALN VI LEQEEE+++++++SNK++
Sbjct: 67  LALSCLCKGNREAFLVCNGFKDN------LVGRKLALNGVIALEQEEELNMVVEISNKLY 120

Query: 61  IR 62
           IR
Sbjct: 121 IR 122


>Medtr3g113910.1 | pyridoxal-binding domain pyridoxal-dependent
           decarboxylase | LC | chr3:53123946-53121823 | 20130731
          Length = 236

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 6/62 (9%)

Query: 1   MAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKMH 60
           +A+SCLCKGN EA L+CNGFKD       L  RKLALN VI LEQEEE+++++++SNK++
Sbjct: 161 LALSCLCKGNREAFLVCNGFKDN------LVGRKLALNGVIALEQEEELNMVVEISNKLY 214

Query: 61  IR 62
           IR
Sbjct: 215 IR 216