Miyakogusa Predicted Gene

Lj1g3v3354060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3354060.1 Non Characterized Hit- tr|I3SKX0|I3SKX0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.8,0,Thioredoxin-like,Thioredoxin-like fold; seg,NULL;
PHOSDUCIN-LIKE PROTEIN 2, 3 (VIRAL IAP-ASSOCIATED ,CUFF.30514.1
         (250 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034610.1 | phosducin-like protein | HC | chr2:13241871-13...   385   e-107

>Medtr2g034610.1 | phosducin-like protein | HC |
           chr2:13241871-13237468 | 20130731
          Length = 250

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/250 (74%), Positives = 204/250 (81%)

Query: 1   MADYHFVYKDLEGASTQWDDIQRKLGNLXXXXXXXXXXXXXXXXXXXTLPKDKDWLDSKT 60
           M DYHF+YKDLEG+STQWDDIQ KLGNL                   ++PKDK W+DSKT
Sbjct: 1   MGDYHFIYKDLEGSSTQWDDIQAKLGNLPPKQPAFKPAPFSPATDPDSIPKDKSWIDSKT 60

Query: 61  QXXXXXXXXXXXXXRFLQEYRKKRLAEIQETAKVLRFGSVTPISGSDFIREVSQAPSDVW 120
                         RFLQEYRKKRLAEIQE AKVLR+GSVTPISGSDF+REVSQAPSDVW
Sbjct: 61  HDELEDLEDDLDDDRFLQEYRKKRLAEIQEAAKVLRYGSVTPISGSDFVREVSQAPSDVW 120

Query: 121 VVVILYKEGIPECVLLMQSIEELAARYPATKFVKIISTDCIPNYPDRNLPTLLVYNNGAV 180
           VVVILYK+GIPEC +LMQ IEELA  YPATKFVKIISTDCIPNYPD NLPTLLVYNNGAV
Sbjct: 121 VVVILYKDGIPECGVLMQCIEELATMYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAV 180

Query: 181 KGNYVGLHSFGRRCTPEGVALVLCQSDPVLNDGQSGNEQSREAVIEGVRKRFIEKVVLDH 240
           KGNYVG+  FGRRCTPEGVAL+LCQSDPVLNDGQS +E+SR+AVI+GVRKRFIEKVV DH
Sbjct: 181 KGNYVGMKRFGRRCTPEGVALILCQSDPVLNDGQSRDEESRQAVIDGVRKRFIEKVVADH 240

Query: 241 EEQEDDSTSD 250
           EE++DDS+SD
Sbjct: 241 EEKDDDSSSD 250