Miyakogusa Predicted Gene

Lj1g3v3330550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3330550.1 tr|G0LBN3|G0LBN3_ZOBGA High-affinity
nickel-transport protein OS=Zobellia galactanivorans (strain
DS,30.91,1e-18,NicO,Nickel/cobalt transporter, high-affinity;
seg,NULL,CUFF.30483.1
         (383 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g073010.1 | high-affinity nickel-transport family protein ...   394   e-110

>Medtr4g073010.1 | high-affinity nickel-transport family protein |
           HC | chr4:27615276-27617786 | 20130731
          Length = 380

 Score =  394 bits (1013), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/369 (61%), Positives = 248/369 (67%), Gaps = 16/369 (4%)

Query: 21  FPFLNRSQSARFNFFPSTRSYLKRGTSICCNHQNXXXXXXXXXILASKQPNNLPSLSFSP 80
            P   R  SARFNFFPS RS  K   SI  N++N         +    +PNN  SLS   
Sbjct: 22  LPLKPRFNSARFNFFPSNRSSFKWVASISRNNENPSPFLSATPLFV--KPNN--SLSHVA 77

Query: 81  DRSSP--EPNSLTQISXXXXXXXXASQKPKALTARTLVILSALVTILXXXXXXXXXXXXX 138
           +  +P  E   + +I+          +KPK LT +T VILSALV +L             
Sbjct: 78  NSDNPIIESQPVNKINATDF------KKPKGLTVQTFVILSALVVLLIQPVFAPAAFATF 131

Query: 139 XXXXX----XXXXVGGKLIRTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMES 194
                        VGGKLIRTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTR ES
Sbjct: 132 ANAAKTSGPATTAVGGKLIRTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRTES 191

Query: 195 AAVGALWGCGHDAGQVIFGLIFLILKDRLHIEIIRTWGTRVVGFTLLVIGAMGIREASEA 254
           A VGALWGCGHDAGQ+IFGLIFL+LKDRLHIEIIRTWGTRVVG TLLVIGAMGI+EASE 
Sbjct: 192 ALVGALWGCGHDAGQLIFGLIFLLLKDRLHIEIIRTWGTRVVGLTLLVIGAMGIKEASEV 251

Query: 255 AAPSVALENGEGDVNVYESLDNPKTRKKKIGFATFATGIVHGLQPDXXXXXXXXXXXXSR 314
           +AP VALENGE  V  YESLDNP   KKKIGFATFATGIVHGLQPD            SR
Sbjct: 252 SAPIVALENGESSVGAYESLDNPVAGKKKIGFATFATGIVHGLQPDALMMVLPALALPSR 311

Query: 315 LAGAAFLIMFLFGTVIAMGSYTVFIGSCSEALKDKVPRITEKLTWXXXXXXXXXXXXXXX 374
           ++GAAFLIMFL GTV+AMGSYTVFIGSCS+ALKD+VPRITEKLTW               
Sbjct: 312 VSGAAFLIMFLVGTVVAMGSYTVFIGSCSQALKDRVPRITEKLTWASSLIAIALGFAIII 371

Query: 375 XQFFGFSLY 383
            QFFGFSLY
Sbjct: 372 SQFFGFSLY 380