Miyakogusa Predicted Gene
- Lj1g3v3329970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3329970.1 Non Characterized Hit- tr|I1JSB1|I1JSB1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35760
PE,74.73,0,CYCLINS,Cyclin, N-terminal; domain present in cyclins,
TFIIB and Retinob,Cyclin-like; seg,NULL; no d,CUFF.30450.1
(362 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g023790.1 | carboxy-terminal domain cyclin | HC | chr5:947... 384 e-107
Medtr8g074000.1 | carboxy-terminal domain cyclin | HC | chr8:312... 373 e-103
Medtr5g023790.3 | carboxy-terminal domain cyclin | HC | chr5:947... 327 1e-89
Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731 248 8e-66
Medtr5g088980.1 | carboxy-terminal domain cyclin | HC | chr5:386... 238 5e-63
Medtr5g023790.2 | carboxy-terminal domain cyclin | HC | chr5:947... 236 3e-62
Medtr1g011470.1 | carboxy-terminal domain cyclin | HC | chr1:203... 172 6e-43
Medtr3g107970.1 | carboxy-terminal domain cyclin | HC | chr3:498... 171 8e-43
Medtr3g088415.1 | carboxy-terminal domain cyclin | HC | chr3:401... 164 2e-40
Medtr3g088405.1 | carboxy-terminal domain cyclin | HC | chr3:401... 157 1e-38
Medtr2g102520.1 | carboxy-terminal domain cyclin | HC | chr2:441... 155 5e-38
Medtr2g102550.1 | carboxy-terminal domain cyclin | HC | chr2:441... 153 2e-37
Medtr3g088415.2 | carboxy-terminal domain cyclin | HC | chr3:401... 148 8e-36
Medtr1g018680.1 | carboxy-terminal domain cyclin | HC | chr1:543... 146 2e-35
Medtr3g102560.1 | carboxy-terminal domain cyclin | HC | chr3:472... 136 3e-32
Medtr3g102510.1 | carboxy-terminal domain cyclin | HC | chr3:472... 136 4e-32
Medtr3g060770.1 | carboxy-terminal domain cyclin | LC | chr3:241... 133 2e-31
Medtr3g061680.1 | carboxy-terminal domain cyclin | LC | chr3:246... 133 3e-31
Medtr3g102520.1 | carboxy-terminal domain cyclin | HC | chr3:472... 132 5e-31
Medtr3g460990.1 | carboxy-terminal domain cyclin | LC | chr3:240... 130 2e-30
Medtr3g060400.1 | carboxy-terminal domain cyclin | LC | chr3:236... 130 2e-30
Medtr3g060820.1 | carboxy-terminal domain cyclin | LC | chr3:241... 129 3e-30
Medtr3g088415.3 | carboxy-terminal domain cyclin | HC | chr3:401... 122 5e-28
Medtr3g060410.1 | carboxy-terminal domain cyclin | LC | chr3:236... 122 6e-28
Medtr3g102530.1 | carboxy-terminal domain cyclin | HC | chr3:472... 119 5e-27
Medtr3g102540.1 | carboxy-terminal domain cyclin | LC | chr3:472... 110 2e-24
Medtr6g045270.1 | carboxy-terminal domain cyclin | LC | chr6:113... 102 8e-22
Medtr5g011900.1 | amine-terminal domain cyclin | LC | chr5:35020... 98 1e-20
Medtr5g044040.1 | amine-terminal domain cyclin | LC | chr5:19364... 80 5e-15
Medtr1g032850.1 | carboxy-terminal domain cyclin | HC | chr1:117... 66 6e-11
Medtr5g015670.1 | carboxy-terminal domain cyclin | HC | chr5:546... 61 2e-09
Medtr2g005960.1 | amine-terminal domain cyclin | LC | chr2:40294... 59 7e-09
Medtr3g100710.1 | carboxy-terminal domain cyclin | HC | chr3:463... 55 1e-07
Medtr4g080990.1 | carboxy-terminal domain cyclin | HC | chr4:312... 51 2e-06
Medtr5g032550.1 | carboxy-terminal domain cyclin | HC | chr5:139... 50 3e-06
Medtr5g032550.2 | carboxy-terminal domain cyclin | HC | chr5:139... 49 7e-06
>Medtr5g023790.1 | carboxy-terminal domain cyclin | HC |
chr5:9472333-9468437 | 20130731
Length = 428
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 253/399 (63%), Gaps = 44/399 (11%)
Query: 7 HRLPLRSINQNIMDKDKP--CIPNKVSLSGNQNL-------------------------- 38
+R L INQN++ + +P C+ NK +LS N+
Sbjct: 28 NRRALGVINQNLVVEGRPYPCVVNKRALSERNNVCEKKQADPVHRPITRRFAAKIASTKT 87
Query: 39 -----------LASTPSNQLDSAIIDNGEY----EDAVPVFVKHTEAMLXXXXXXXXXXX 83
LA++ SN I + E+ + VP+ ++ TE M
Sbjct: 88 SNAEGTTKKSNLANSSSNGFGDFIFVDDEHKPVEDQPVPMALEQTEPMHSESDRMEEVEM 147
Query: 84 XXXXXXXXXXXAC-DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAI 142
D NDPLAV EYI+D+Y +Y+K E + CVSP YM QFDINE+MRAI
Sbjct: 148 EDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQQFDINERMRAI 207
Query: 143 LMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVP 202
L+DWLIEVH K VNLIDRFL Q+V+RKKLQLVG+ AML+ACKYEEVSVP
Sbjct: 208 LVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVP 267
Query: 203 TVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSF 262
V D ILI+D+AYTR EVL MEK+MVN L+FN+SVPT YVFMRRFLKAA +D+KLELL+F
Sbjct: 268 VVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRKLELLAF 327
Query: 263 FLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLM 322
FLIEL LVE MLKF PS LAAAA+YTAQC++Y KQW+KT EW+T YSE+QLLECS LM
Sbjct: 328 FLIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQWSKTCEWHTNYSEDQLLECSSLM 387
Query: 323 VTYHQKAGSGKLTGVYRKYSSLKYGCAAKVEPAHFVLDG 361
V +H+KAG+GKLTG +RKY + K+ AK EPA F+L+
Sbjct: 388 VDFHKKAGTGKLTGAHRKYGTSKFSYTAKCEPASFLLEN 426
>Medtr8g074000.1 | carboxy-terminal domain cyclin | HC |
chr8:31292669-31296642 | 20130731
Length = 434
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/395 (51%), Positives = 253/395 (64%), Gaps = 40/395 (10%)
Query: 7 HRLPLRSINQN-IMDKDKPCIPNKVSLS---------------------------GNQNL 38
+R L INQN + D+ PC+ +K LS G+Q
Sbjct: 36 NRRALGGINQNFVHDRPYPCVVHKRVLSEKHEICEKKQADLGHRPITRRFAAQIAGSQQS 95
Query: 39 LA-----STP--SNQLDSAIIDNGEY----EDAVPVFVKHTEAMLXX-XXXXXXXXXXXX 86
A S P SN+ ++I + E + P+ ++HTE M
Sbjct: 96 YAEKTKNSNPLNSNEFGNSIAVDDELKSPEDQPEPMTLEHTEPMHSDPLEMEEVEMEDIE 155
Query: 87 XXXXXXXXACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDW 146
+CD N+ LAVVEYI+D++ +Y+K E CVSPAYM Q D+NE+MRAIL+DW
Sbjct: 156 GEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPAYMDEQLDLNERMRAILVDW 215
Query: 147 LIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVED 206
LIEVH K VNLIDRFLA Q V+RKKLQLVG+ AML+ACKYEEVSVP V D
Sbjct: 216 LIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSD 275
Query: 207 FILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIE 266
I I D+AYTR ++L MEK M+NTLQ+N+S+PT YVFMRRFLKAA +DKKLEL++FFL+E
Sbjct: 276 LIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFLVE 335
Query: 267 LCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYH 326
L LVE +MLKF PSL+AAAA+YTAQC++ FK W KT EW+T YSE+QLLECS LMV +H
Sbjct: 336 LSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKHWNKTCEWHTNYSEDQLLECSMLMVGFH 395
Query: 327 QKAGSGKLTGVYRKYSSLKYGCAAKVEPAHFVLDG 361
QKAG+GKLTGV+RKY S K+ AK EPA F+L+
Sbjct: 396 QKAGAGKLTGVHRKYGSAKFSFTAKCEPACFLLEN 430
>Medtr5g023790.3 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468202 | 20130731
Length = 381
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/354 (50%), Positives = 219/354 (61%), Gaps = 44/354 (12%)
Query: 7 HRLPLRSINQNIMDKDKP--CIPNKVSLSGNQNL-------------------------- 38
+R L INQN++ + +P C+ NK +LS N+
Sbjct: 28 NRRALGVINQNLVVEGRPYPCVVNKRALSERNNVCEKKQADPVHRPITRRFAAKIASTKT 87
Query: 39 -----------LASTPSNQLDSAIIDNGEY----EDAVPVFVKHTEAMLXXXXXXXXXXX 83
LA++ SN I + E+ + VP+ ++ TE M
Sbjct: 88 SNAEGTTKKSNLANSSSNGFGDFIFVDDEHKPVEDQPVPMALEQTEPMHSESDRMEEVEM 147
Query: 84 XXXXXXXXXXXAC-DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAI 142
D NDPLAV EYI+D+Y +Y+K E + CVSP YM QFDINE+MRAI
Sbjct: 148 EDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQQFDINERMRAI 207
Query: 143 LMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVP 202
L+DWLIEVH K VNLIDRFL Q+V+RKKLQLVG+ AML+ACKYEEVSVP
Sbjct: 208 LVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVP 267
Query: 203 TVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSF 262
V D ILI+D+AYTR EVL MEK+MVN L+FN+SVPT YVFMRRFLKAA +D+KLELL+F
Sbjct: 268 VVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRKLELLAF 327
Query: 263 FLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLL 316
FLIEL LVE MLKF PS LAAAA+YTAQC++Y KQW+KT EW+T YSE+QLL
Sbjct: 328 FLIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQWSKTCEWHTNYSEDQLL 381
>Medtr7g089080.1 | cyclin | HC | chr7:34806771-34800306 | 20130731
Length = 1318
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 185/271 (68%), Gaps = 7/271 (2%)
Query: 95 ACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKX 154
A D N+ LA VEY++DIY FYK E S YM SQ +INE+MR IL+DWL++VH K
Sbjct: 187 AGDTNNELAAVEYLEDIYKFYKIVENES-RPHDYMDSQPEINERMRGILIDWLVDVHSKF 245
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
+N++DRFLA V R++LQLVG++AML+A KYEE+ P V DF+ ++D+A
Sbjct: 246 ELSPETLYLTINIVDRFLAVNLVSRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRA 305
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAY-----SDK-KLELLSFFLIELC 268
Y+ ++L MEK ++ L++ L+VPTP+VF+ RF+KAA SD+ LE+++ FL EL
Sbjct: 306 YSHEQILIMEKTILGKLEWTLTVPTPFVFLVRFIKAASVSAVPSDQGDLEMMAHFLSELG 365
Query: 269 LVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQK 328
++ L++ PS+LAA+A+Y A+ +L + W +T + +TGYSEEQL++C+RL+V++H
Sbjct: 366 MMHYATLRYCPSMLAASAVYAARSTLSKTPVWNETLKMHTGYSEEQLMDCARLLVSFHSG 425
Query: 329 AGSGKLTGVYRKYSSLKYGCAAKVEPAHFVL 359
A +GKL VY+KYS + G A + PA +L
Sbjct: 426 AENGKLKVVYKKYSDPQKGAVAALPPAKNLL 456
>Medtr5g088980.1 | carboxy-terminal domain cyclin | HC |
chr5:38636983-38633820 | 20130731
Length = 421
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 175/263 (66%), Gaps = 3/263 (1%)
Query: 95 ACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKX 154
A D+ + LA EYIDDIY +YK +E V YM SQ DIN KMRAIL+DWLIEVH K
Sbjct: 153 ASDKENELAATEYIDDIYKYYKLSEDDVRVHD-YMASQPDINVKMRAILIDWLIEVHRKF 211
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
+N++DRFL+ + V RK+LQLVG+++MLIA KYEE+ P V DF+ I+D A
Sbjct: 212 ELMPETFYLTLNIVDRFLSTKAVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNA 271
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAY-SDKKLELLSFFLIELCLVE-C 272
Y R +VL MEK ++ L++ L+VPTPYVF+ R++KA+ SDK++E + FL EL ++
Sbjct: 272 YVREQVLVMEKTILRNLEWYLTVPTPYVFLVRYIKASTPSDKEMESMVNFLAELSMMHYA 331
Query: 273 KMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSG 332
+ + PS++AA+A+Y A+ +L + WT T + YTGYSEEQL +C++LM ++H A
Sbjct: 332 TVSSYCPSMIAASAVYAARSTLERSPFWTDTLKHYTGYSEEQLRDCAKLMASFHSAAPES 391
Query: 333 KLTGVYRKYSSLKYGCAAKVEPA 355
+L +Y+K+ S A + PA
Sbjct: 392 RLRAIYKKFCSSDRCAVALMTPA 414
>Medtr5g023790.2 | carboxy-terminal domain cyclin | HC |
chr5:9472324-9468437 | 20130731
Length = 357
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 174/314 (55%), Gaps = 52/314 (16%)
Query: 7 HRLPLRSINQNIMDKDKP--CIPNKVSLSGNQNL-------------------------- 38
+R L INQN++ + +P C+ NK +LS N+
Sbjct: 28 NRRALGVINQNLVVEGRPYPCVVNKRALSERNNVCEKKQADPVHRPITRRFAAKIASTKT 87
Query: 39 -----------LASTPSNQLDSAIIDNGEY----EDAVPVFVKHTEAMLXXXXXXXXXXX 83
LA++ SN I + E+ + VP+ ++ TE M
Sbjct: 88 SNAEGTTKKSNLANSSSNGFGDFIFVDDEHKPVEDQPVPMALEQTEPMHSESDRMEEVEM 147
Query: 84 XXXXXX-XXXXXACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAI 142
D NDPLAV EYI+D+Y +Y+K E + CVSP YM QFDINE+MRAI
Sbjct: 148 EDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTGCVSPNYMAQQFDINERMRAI 207
Query: 143 LMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVP 202
L+DWLIEVH K VNLIDRFL Q+V+RKKLQLVG+ AML+ACKYEEVSVP
Sbjct: 208 LVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVP 267
Query: 203 TVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLEL--- 259
V D ILI+D+AYTR EVL MEK+MVN L+FN+SVPT YVFMRRFLKAA +D+K+
Sbjct: 268 VVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRKVRTQIS 327
Query: 260 -----LSFFLIELC 268
+ FF I C
Sbjct: 328 EKGSSMPFFFIITC 341
>Medtr1g011470.1 | carboxy-terminal domain cyclin | HC |
chr1:2038488-2033308 | 20130731
Length = 422
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 143/264 (54%), Gaps = 8/264 (3%)
Query: 98 RNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYM-TSQFDINEKMRAILMDWLIEVHYKXXX 156
R+ P+ Y DIY E YM T Q DI MR IL+DWL+EV +
Sbjct: 153 RDSPIWT-SYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKL 211
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYT 216
VNLIDRFL+ + + +++LQL+G+T MLI+ KYEE+ P VEDF +ITD Y+
Sbjct: 212 VPDTLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCVITDNTYS 271
Query: 217 RNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLVE 271
R EVL MEK ++N L F L+VPT F+RRF++ A + K LE L+ +L EL LVE
Sbjct: 272 RQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVE 331
Query: 272 CKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKAG 330
L+F PS +AA+++ A+ +L Q + W T E YT Y +L ++
Sbjct: 332 YSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELIDLQLNTK 391
Query: 331 SGKLTGVYRKYSSLKYGCAAKVEP 354
+L V KY K+ A + P
Sbjct: 392 RCRLNAVREKYQHQKFNSVANLSP 415
>Medtr3g107970.1 | carboxy-terminal domain cyclin | HC |
chr3:49887211-49892757 | 20130731
Length = 478
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 140/255 (54%), Gaps = 7/255 (2%)
Query: 107 YIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
Y DIY + +E S YM Q DI+ MR IL+DWL+EV + V
Sbjct: 213 YAPDIYTKVRVSELEKRPSTNYMEKLQQDISPSMRGILIDWLVEVSEEYKLVPDTLYLTV 272
Query: 166 NLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLNMEK 225
NLIDRFL+ + + +LQL+GVT M IA KYEE+ P VE+F ITD YT+ EV+ MEK
Sbjct: 273 NLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEK 332
Query: 226 LMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLVECKMLKFSPS 280
++N L+F LSVPT F+RRF++AA S K LE L+ +L EL LVE L+F PS
Sbjct: 333 EVLNLLRFQLSVPTTKTFIRRFIQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPS 392
Query: 281 LLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVYR 339
+AA+A++ A+ +L + WT T E +T Y +L + L +
Sbjct: 393 RVAASAVFLARWTLNHSEHPWTTTLEHFTNYKASELKPVVLALEDLQLNTKGCSLHAIRE 452
Query: 340 KYSSLKYGCAAKVEP 354
KY K+ AK+ P
Sbjct: 453 KYKHEKFNGVAKLSP 467
>Medtr3g088415.1 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182656 | 20130731
Length = 505
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 143/257 (55%), Gaps = 7/257 (2%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXX 155
D DP + DIY + +E S +M Q DIN MRAIL+DWL+EV +
Sbjct: 230 DYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYR 289
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN IDR+L+ + R++LQL+GV +M+IA KYEE+ P VE+F ITD Y
Sbjct: 290 LVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTY 349
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYS-----DKKLELLSFFLIELCLV 270
++EVL ME ++N L+F ++ PT F+RRF++AA +LE L+ F+ EL L+
Sbjct: 350 FKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLL 409
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQ-FKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKA 329
E ML ++PSL+AA++I+ A+ L+ K W T + YT Y L C + + +
Sbjct: 410 EYSMLCYAPSLIAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLCACVKDLHRLCCNS 469
Query: 330 GSGKLTGVYRKYSSLKY 346
+ L + KY+ KY
Sbjct: 470 PNSNLPAIKEKYNQHKY 486
>Medtr3g088405.1 | carboxy-terminal domain cyclin | HC |
chr3:40170176-40175369 | 20130731
Length = 510
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 147/266 (55%), Gaps = 11/266 (4%)
Query: 97 DRN--DPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYK 153
DRN DP + +IY + +EK S YM Q IN MRA+L+DWL+EV +
Sbjct: 231 DRNTKDPQFCASFAHEIYENLRVSEKFKRPSMDYMEKIQKKINASMRAMLIDWLVEVADE 290
Query: 154 XXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDK 213
VN +DR+L+ + + ++LQL+GVT M+IA KYEE+ P VE+F +TD
Sbjct: 291 YRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKVEEFCYVTDN 350
Query: 214 AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD-----KKLELLSFFLIELC 268
Y++ +VL ME ++N L+F ++ PT F+RRF+ A +LE L+ ++ +L
Sbjct: 351 TYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRFITVAQQTCEIPLMQLEYLADYVADLS 410
Query: 269 LVECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQ 327
L+E MLK++PSL+AA+A + A+ L K W YTGY +L EC + ++
Sbjct: 411 LLEYDMLKYTPSLIAASATFLAKYILLSTKNPWNSMLRHYTGYQASELRECVEGLHLLYR 470
Query: 328 KA--GSGKLTGVYRKYSSLKYGCAAK 351
S +T + KYS K+ AAK
Sbjct: 471 NGYHSSPSITAIREKYSQHKFKFAAK 496
>Medtr2g102520.1 | carboxy-terminal domain cyclin | HC |
chr2:44171841-44168809 | 20130731
Length = 479
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 125/227 (55%), Gaps = 7/227 (3%)
Query: 96 CDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYM-TSQFDINEKMRAILMDWLIEVHYKX 154
D DP Y DIY + E S P +M T Q DI MRAIL+DWL+EV
Sbjct: 204 ADFEDPQLCSHYAADIYDHLRVAELSRRPYPNFMETVQQDITPSMRAILVDWLVEVSEGY 263
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
V LID FL+ + R++LQL+G+T MLIA KYEEV+ P +EDF ITD
Sbjct: 264 KLQANTLYLTVYLIDWFLSKNCIERERLQLLGITCMLIASKYEEVNAPRIEDFCFITDNT 323
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCL 269
YT+ EV+ +E L++ + + L PT F+RRFL+AA + K LE L+ +L EL L
Sbjct: 324 YTKEEVVKLESLVLKSSSYQLFAPTTKTFLRRFLRAAQASYKRPSIELEYLANYLAELTL 383
Query: 270 VECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQL 315
+ L F PS++AA+A++ A+ +L Q W T E Y Y L
Sbjct: 384 MNYGFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLEHYASYKASDL 430
>Medtr2g102550.1 | carboxy-terminal domain cyclin | HC |
chr2:44178430-44174949 | 20130731
Length = 429
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 128/227 (56%), Gaps = 7/227 (3%)
Query: 96 CDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYM-TSQFDINEKMRAILMDWLIEVHYKX 154
D DP Y DIY + E S P +M T Q DI MRAIL+DWL+EV +
Sbjct: 156 ADIEDPQLCSFYAADIYDNLRVAELSRRPHPNFMETVQRDITPGMRAILIDWLVEVSEQF 215
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
V LID FL+ ++ K+LQL+G+T MLIA KYEE++ +EDF ++TD
Sbjct: 216 NLQANTLYLTVYLIDWFLSKNSIEIKRLQLLGITCMLIASKYEEINANHIEDFCVMTDNT 275
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCL 269
YTR EVLNME ++ + + LS PT F+RRFL+AA + + LE L+ +L EL L
Sbjct: 276 YTREEVLNMEIQVLKSSAYQLSAPTTKHFLRRFLRAAQASYQRPSVELEYLANYLAELTL 335
Query: 270 VECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQL 315
+ L F PS++AA+A++ A+ +L Q + W T E Y Y L
Sbjct: 336 MNYGFLNFFPSMIAASAVFLARWTLDQSRHPWNPTLEHYASYKASDL 382
>Medtr3g088415.2 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40182268 | 20130731
Length = 443
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 7/211 (3%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXX 155
D DP + DIY + +E S +M Q DIN MRAIL+DWL+EV +
Sbjct: 230 DYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYR 289
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN IDR+L+ + R++LQL+GV +M+IA KYEE+ P VE+F ITD Y
Sbjct: 290 LVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTY 349
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYS-----DKKLELLSFFLIELCLV 270
++EVL ME ++N L+F ++ PT F+RRF++AA +LE L+ F+ EL L+
Sbjct: 350 FKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLL 409
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQ-FKQW 300
E ML ++PSL+AA++I+ A+ L+ K W
Sbjct: 410 EYSMLCYAPSLIAASSIFLAKYMLFPAMKPW 440
>Medtr1g018680.1 | carboxy-terminal domain cyclin | HC |
chr1:5434143-5436837 | 20130731
Length = 363
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 9/260 (3%)
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSP--AYMTS-QFDINEKMRAILMDWLIEVHYKXXX 156
DP Y+ DIY + + E S P Y+ Q D+N MR +L+DWL+EV +
Sbjct: 84 DPQLCETYVSDIYDYLRNMEVDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYKL 143
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYT 216
V+ IDRFL+ + R+KLQL+GV +ML+A KYEE+ P VEDF ITD Y+
Sbjct: 144 VSDTLYFSVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFCYITDNTYS 203
Query: 217 RNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAY-----SDKKLELLSFFLIELCLVE 271
+ EVL ME ++ +L+F L PT F+R Y S+ + E L +L EL L++
Sbjct: 204 KEEVLTMEADILKSLKFELGGPTIKTFLRHVCFIDYVSLYASELQFEFLCSYLAELSLLD 263
Query: 272 CKMLKFSPSLLAAAAIYTAQCSLY-QFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAG 330
+KF PS++AA+ ++ A+ L + W +T Y L EC + +
Sbjct: 264 YNCVKFLPSMVAASVVFLARFMLSPKTHPWNSAIYEFTRYKPADLKECVLNIHDLYLGRK 323
Query: 331 SGKLTGVYRKYSSLKYGCAA 350
G L V KY K+ C A
Sbjct: 324 GGSLQAVRDKYKQHKFKCVA 343
>Medtr3g102560.1 | carboxy-terminal domain cyclin | HC |
chr3:47265371-47267354 | 20130731
Length = 324
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 11/193 (5%)
Query: 132 QFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAML 191
Q DI+ KMR IL+DWL+EV + V+ IDRFL+ + R KLQL+GV++M
Sbjct: 92 QRDIDPKMRGILIDWLVEVVEEYKLQNDTLHRAVSYIDRFLSYYPICRVKLQLLGVSSMY 151
Query: 192 IACKYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAA 251
IA KYE+++ P VE+ ITD Y R+EVL ME ++ TL +L PT F+R+ + +
Sbjct: 152 IASKYEDINPPHVEELCFITDNTYNRDEVLEMETDILKTLDNDLGSPTVKTFLRQEIAKS 211
Query: 252 YSDKKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEW----- 306
S+ + E LS +L EL L++ ++F PSL+AA+ A +F W KT W
Sbjct: 212 ASNLQFEFLSNYLAELSLLDYACVRFLPSLVAASITLLA-----RFIVWPKTYPWPSALQ 266
Query: 307 -YTGYSEEQLLEC 318
Y+GY +L EC
Sbjct: 267 EYSGYKPVELKEC 279
>Medtr3g102510.1 | carboxy-terminal domain cyclin | HC |
chr3:47243553-47241418 | 20130731
Length = 340
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 130/253 (51%), Gaps = 7/253 (2%)
Query: 107 YIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
Y+ DI+ + + EK YM + Q I MR L+DWL+EV + V
Sbjct: 74 YVSDIFDYLQTMEKKRRPMFGYMENVQRGITSNMRGTLVDWLVEVADEYTLLPETLHLSV 133
Query: 166 NLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLNMEK 225
+ IDRFL+ Q +IR KLQL+GV++MLIA KYEE++ P DF ITD Y +EVL ME
Sbjct: 134 SYIDRFLSNQPIIRSKLQLLGVSSMLIASKYEEITPPKAIDFCQITDNTYDLDEVLKMEA 193
Query: 226 LMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSF-----FLIELCLVECKMLKFSPS 280
++ TL F + P F++ F+ A ++K L F +L ++ L++ + ++F PS
Sbjct: 194 DILKTLNFEMGNPNVITFLKSFVGIASENQKTSNLQFEYLCNYLADISLLDYECIRFMPS 253
Query: 281 LLAAAAIYTAQCSLYQ-FKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVYR 339
++AA+ I+ A+ L WT + GY +L EC ++ + + V
Sbjct: 254 IVAASVIFLARFILRPGVHPWTSSLCECLGYKSAELEECVMILHDLYLSRRAASFKAVRE 313
Query: 340 KYSSLKYGCAAKV 352
KY K+ A +
Sbjct: 314 KYKQQKFKYVANL 326
>Medtr3g060770.1 | carboxy-terminal domain cyclin | LC |
chr3:24109546-24108680 | 20130731
Length = 288
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 137/246 (55%), Gaps = 11/246 (4%)
Query: 106 EYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
+Y DD+Y FY E + + F ++ MR I++DWLI+ HYK V
Sbjct: 31 DYDDDLYKFYHIEESQIRAN----SKGFKVDFLMRKIVVDWLIQTHYKQKLMPETLYLCV 86
Query: 166 NLIDRFLA---CQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLN 222
N++DRFL+ + KL+L+G++++L+A KYE+ SV V D + D Y E+
Sbjct: 87 NILDRFLSKIEFEVTTMDKLKLMGLSSLLLASKYEQRSVVGVYDIEGMADYIYMPKEICQ 146
Query: 223 MEKLMVNTLQFNLSVPTPYVFMRRFLKAAY---SDKKLELLSFFLIELCLVECKML-KFS 278
MEKL++ L + L+VPTPYVF+ R ++ DK +E + FF EL L ++ +
Sbjct: 147 MEKLILQELGWILTVPTPYVFLIRNIRTCLLSDEDKIMEKMVFFFSELSLTNHSIVCDYK 206
Query: 279 PSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVY 338
PS++AA ++Y A+ + ++ W+ + TGYSE++LL C+ +M+ + V+
Sbjct: 207 PSMIAACSVYCARFVVERYPFWSNDLKMCTGYSEDKLLSCASVMMDSCIQICRDGYMEVF 266
Query: 339 RKYSSL 344
+K+SSL
Sbjct: 267 KKFSSL 272
>Medtr3g061680.1 | carboxy-terminal domain cyclin | LC |
chr3:24614151-24614996 | 20130731
Length = 281
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 144/257 (56%), Gaps = 16/257 (6%)
Query: 106 EYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
+Y DD+Y FY E + + F ++ +MR ++DWLI+ HY+ V
Sbjct: 21 DYDDDLYKFYHLEESQIRAN----SKGFKVDFQMRMNVVDWLIQTHYEQKLMPETLYLCV 76
Query: 166 NLIDRFLA---CQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLN 222
N++DR L+ + KL+L+G++++L+A KYE+ S V D + D Y E+
Sbjct: 77 NILDRVLSKIKFEVTTMDKLKLIGLSSLLLASKYEQRSAVGVYDVEYMADYIYMPEEICQ 136
Query: 223 MEKLMVNTLQFNLSVPTPYVFMRRFLKAAY---SDKKLELLSFFLIELCLVECKML-KFS 278
MEKL++ L + L+VPTPYVF+ R ++A DK +E + FF EL L ++ +
Sbjct: 137 MEKLILQELGWILTVPTPYVFLVRNMRACLLSDQDKIMENMVFFFSELSLTNQSIVCDYK 196
Query: 279 PSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMV-TYHQKAGSGKLTGV 337
PS++AA ++Y A+ + ++ W+ + TGYSEE+LL C+ +M+ + Q G G + V
Sbjct: 197 PSMIAACSVYCARFVVGRYPFWSNDLKMCTGYSEEKLLSCANVMIKSCSQICGDG-IMEV 255
Query: 338 YRKYSSL---KYGCAAK 351
++K+SSL + C A+
Sbjct: 256 FKKFSSLYQSRVSCIAQ 272
>Medtr3g102520.1 | carboxy-terminal domain cyclin | HC |
chr3:47250517-47247642 | 20130731
Length = 372
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 136/274 (49%), Gaps = 14/274 (5%)
Query: 98 RNDPLAVVEYIDDIYCFYKKTEKSSCVSP--AYMTS-QFDINEKMRAILMDWLIEVHYKX 154
R++ + Y+ DI + + E P Y+ + Q I+ MR L+DWL+EV +
Sbjct: 82 RDNQHIIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGISSNMRGTLVDWLVEVADEY 141
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
V+ IDRFL+ + V R KLQL+GV++MLIA KYEE++ P DF ITD
Sbjct: 142 KLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAVDFCQITDNT 201
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCL 269
Y EVL ME ++ +L F + P F++RF+ A ++K E L +L +L L
Sbjct: 202 YDLEEVLKMEADILKSLNFEMGNPNVITFLKRFIGIACENRKNSNLQFEFLCSYLADLSL 261
Query: 270 VECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQK 328
++ + +F PS++AA+ I+ A+ + WT + GY+ L +C ++ +
Sbjct: 262 LDYECTRFLPSVVAASVIFLARFIIRPGAHPWTPSLCECLGYTSANLEDCVIILHDLYMS 321
Query: 329 AGSGKLTGVYRKYSSLKYGCAAKVE-----PAHF 357
+G V KY K C A + P H+
Sbjct: 322 RKAGSFKAVRDKYKQNKLKCVANLPSSPEIPNHY 355
>Medtr3g460990.1 | carboxy-terminal domain cyclin | LC |
chr3:24061471-24062322 | 20130731
Length = 283
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 145/268 (54%), Gaps = 14/268 (5%)
Query: 99 NDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXX 158
N+ +Y DD+Y FY E ++ F ++ ++R ++DWLI+ HY+
Sbjct: 20 NEKKKFSDYDDDLYKFYHLEESQ----IQGNSNGFKVDSQIRKNVVDWLIQTHYEQKLMP 75
Query: 159 XXXXXXVNLIDRFLA---CQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN++DR L+ + +KL+L+G++++L+A KYE+ V + D Y
Sbjct: 76 ETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRKAVGVYHVEYMADYIY 135
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYS---DKKLELLSFFLIELCLVEC 272
E+ MEKL++ L + L+VPTPYVF+ R +KA S DK +E + FF EL L
Sbjct: 136 MPEEICQMEKLILQELGWILTVPTPYVFLVRNVKACVSSDEDKIMENMVFFFSELSLTNH 195
Query: 273 KML-KFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMV-TYHQKAG 330
++ + PSL+AA ++Y A+ + ++ W+ + TGYSEE LL C+ +M+ + Q G
Sbjct: 196 SIVCDYKPSLIAACSVYCARFVVERYPFWSNDLKMCTGYSEENLLSCAHVMMKSCIQICG 255
Query: 331 SGKLTGVYRKYSSLKYGCAAKVEPAHFV 358
G + V++K+SSL Y C F+
Sbjct: 256 EG-IMEVFKKFSSL-YQCRVSCVAQEFL 281
>Medtr3g060400.1 | carboxy-terminal domain cyclin | LC |
chr3:23689234-23690085 | 20130731
Length = 283
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 145/268 (54%), Gaps = 14/268 (5%)
Query: 99 NDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXX 158
N+ +Y DD+Y FY E ++ F ++ ++R ++DWLI+ HY+
Sbjct: 20 NEKKKFSDYDDDLYKFYHLEESQ----IQGNSNGFKVDSQIRKNVVDWLIQTHYEQKLMP 75
Query: 159 XXXXXXVNLIDRFLA---CQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN++DR L+ + +KL+L+G++++L+A KYE+ V + D Y
Sbjct: 76 ETFYLCVNILDRVLSKINFEVKTMEKLKLIGLSSLLLASKYEQRKAVGVYHVEYMADYIY 135
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYS---DKKLELLSFFLIELCLVEC 272
E+ MEKL++ L + L+VPTPYVF+ R +KA S DK +E + FF EL L
Sbjct: 136 MPEEICQMEKLILQELGWILTVPTPYVFLVRNVKACVSSDEDKIMENMVFFFSELSLTNH 195
Query: 273 KML-KFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMV-TYHQKAG 330
++ + PSL+AA ++Y A+ + ++ W+ + TGYSEE LL C+ +M+ + Q G
Sbjct: 196 SIVCDYKPSLIAACSVYCARFVVERYPFWSNDLKMCTGYSEENLLSCAHVMMKSCIQICG 255
Query: 331 SGKLTGVYRKYSSLKYGCAAKVEPAHFV 358
G + V++K+SSL Y C F+
Sbjct: 256 EG-IMEVFKKFSSL-YQCRVSCVAQEFL 281
>Medtr3g060820.1 | carboxy-terminal domain cyclin | LC |
chr3:24117223-24116390 | 20130731
Length = 277
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 143/257 (55%), Gaps = 16/257 (6%)
Query: 106 EYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
+Y DD+Y FY E + + F ++ +MR ++DWLI+ HY+ V
Sbjct: 21 DYDDDLYKFYHLEESQIRAN----SKGFKVDFQMRKNVVDWLIQTHYEQKLMPETLYLCV 76
Query: 166 NLIDRFLA---CQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLN 222
N++DR L+ + KL+L+G++++L+A KYE+ SV V D + D Y E+
Sbjct: 77 NVLDRVLSKIKFEVTTVDKLKLIGLSSLLLASKYEQRSVVGVYDVEYMADYIYMPEEICQ 136
Query: 223 MEKLMVNTLQFNLSVPTPYVFMRRFLKAAY---SDKKLELLSFFLIELCLVECKML-KFS 278
MEKL++ L + L+VPTPYVF+ R ++A DK +E + FF E+ L ++ +
Sbjct: 137 MEKLILQKLGWILTVPTPYVFLVRNIRACLLSDEDKIMENMVFFFSEVSLTNHSIVCDYK 196
Query: 279 PSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMV-TYHQKAGSGKLTGV 337
PSL+AA ++Y A+ + ++ W+ + TGYSEE L C+ +M+ + Q G G + V
Sbjct: 197 PSLIAACSVYCARFVVERYPFWSNDLKICTGYSEENLWSCANVMMKSCIQICGDGHME-V 255
Query: 338 YRKYSSL---KYGCAAK 351
++K+SSL + C A+
Sbjct: 256 FKKFSSLYQSRVSCIAQ 272
>Medtr3g088415.3 | carboxy-terminal domain cyclin | HC |
chr3:40179537-40181795 | 20130731
Length = 397
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 1/156 (0%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXX 155
D DP + DIY + +E S +M Q DIN MRAIL+DWL+EV +
Sbjct: 230 DYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYR 289
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN IDR+L+ + R++LQL+GV +M+IA KYEE+ P VE+F ITD Y
Sbjct: 290 LVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTY 349
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAA 251
++EVL ME ++N L+F ++ PT F+RRF++AA
Sbjct: 350 FKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAA 385
>Medtr3g060410.1 | carboxy-terminal domain cyclin | LC |
chr3:23691060-23693543 | 20130731
Length = 362
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 134/237 (56%), Gaps = 10/237 (4%)
Query: 130 TSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLA---CQTVIRKKLQLVG 186
++ ++ ++R ++DWLI+ HY+ VN++DR L+ + +KL+L+G
Sbjct: 126 SNGLKVDSQLRKNVVDWLIQTHYQQKLMPETLYLCVNILDRVLSKINFEVKTMEKLKLIG 185
Query: 187 VTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRR 246
++++L+A KYE+ V D + D Y E+ MEKL++ L + L+VPTPYVF+ R
Sbjct: 186 LSSLLLASKYEQRRAVGVYDVEYLADYIYMPEEICQMEKLILQELGWILTVPTPYVFLVR 245
Query: 247 FLKA---AYSDKKLELLSFFLIELCLVECKML-KFSPSLLAAAAIYTAQCSLYQFKQWTK 302
++A + DK +E + FF EL L ++ + PS++AA A+Y A+ + ++ W+
Sbjct: 246 NIRACNLSDEDKIMEHMVFFFSELSLTNHSIVCDYKPSMIAACAVYLARFIVGRYPFWSN 305
Query: 303 TSEWYTGYSEEQLLECSRLMV-TYHQKAGSGKLTGVYRKYSSLKYGCAAKVEPAHFV 358
+ TGYSE++LL C+ +M+ + Q G G + V+ K+SSL Y C F+
Sbjct: 306 DLKMCTGYSEDKLLSCAHVMMESCIQICGEG-IMEVFMKFSSL-YQCRVSCIAQEFL 360
>Medtr3g102530.1 | carboxy-terminal domain cyclin | HC |
chr3:47254814-47252673 | 20130731
Length = 352
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 11/240 (4%)
Query: 132 QFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAML 191
Q + MR IL+DWL+EV + V+ IDRFL+ ++V R KLQL+GV++ML
Sbjct: 112 QRGVTANMRGILVDWLVEVAEEYKLLPQTLHLAVSYIDRFLSNESVNRSKLQLLGVSSML 171
Query: 192 IACKYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAA 251
IA KYEE+S P DF ITD Y +V+ ME ++ +L F + P F++ ++ A
Sbjct: 172 IASKYEEISPPKAVDFCQITDNTYELKQVIKMEADILKSLNFEMGNPHVNTFLKEYIGPA 231
Query: 252 YSDKK-----LELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSL-YQFKQWTKTSE 305
D K +E L +L EL L++ + ++F PS++AA+ I+ A+ + T +
Sbjct: 232 TEDLKTSKLQMEFLCNYLAELSLIDYECIRFLPSMVAASVIFLARFIICPGVHPLTSSLS 291
Query: 306 WYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVYRKYSSLKYGCAAKVE-----PAHFVLD 360
Y +L EC ++ + + L V KY K+ A + P H+ ++
Sbjct: 292 ECLFYKSAELEECVLILHDLYLVRRAASLKAVREKYKQHKFKNVANLPSSPEIPNHYFVE 351
>Medtr3g102540.1 | carboxy-terminal domain cyclin | LC |
chr3:47258291-47259784 | 20130731
Length = 277
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 14/225 (6%)
Query: 135 INEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIAC 194
I ++R L+DWL+EV + V+ ID FL+ + R L+L+GV++ IA
Sbjct: 40 ITPELRGKLVDWLVEVAEEYKLHNDTLHLAVSYIDIFLSSHPIRRINLELLGVSSFYIAS 99
Query: 195 KYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD 254
KYE+++ P V+D T + + EV ME ++ TL F+LS PT F+R+ ++A SD
Sbjct: 100 KYEDITPPQVQDLCFTTRDKFNKEEVQEMENKILKTLDFDLSNPTVMTFLRQ--ESAKSD 157
Query: 255 K--KLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEW-----Y 307
+ E L+ +L EL L++ L F PSL+AA+ ++ A+ W K+ W Y
Sbjct: 158 SYLQFEFLTNYLAELSLLDYDCLSFLPSLVAASVVFLARIIF-----WPKSLPWATLQEY 212
Query: 308 TGYSEEQLLECSRLMVTYHQKAGSGKLTGVYRKYSSLKYGCAAKV 352
+ Y +L EC ++ H + KY ++ A +
Sbjct: 213 SEYKPVELRECVLVLHDLHTSEKGASFKAIRTKYKQHEFEYVADL 257
>Medtr6g045270.1 | carboxy-terminal domain cyclin | LC |
chr6:11390216-11391181 | 20130731
Length = 321
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 129/257 (50%), Gaps = 20/257 (7%)
Query: 106 EYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
+Y DD Y F+ E+ + Y IN R +L+D +I+ HY V
Sbjct: 45 DYEDDFYKFHH-LEECQISTNLYGVR---INCDERKLLIDSIIDAHYALNLAPETLYLCV 100
Query: 166 NLIDRFLA---CQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLN 222
N+IDRFL+ + +K++ V ++L+A KYE+ V D + I + V
Sbjct: 101 NIIDRFLSKLNPPSTPMEKIKFVPHISLLLASKYEQRHKLHVRDLVHIPPEV-----VCE 155
Query: 223 MEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECKML-KFSPSL 281
EKL++ L +NL+V TPYVF+ R +K DK +E + FF EL L ++ + PS+
Sbjct: 156 TEKLILQKLDWNLTVTTPYVFLVRNIKD--EDKMMENMVFFFSELSLTHYSIVCDYKPSM 213
Query: 282 LAAAAIYTAQCSLYQFKQWTKTSEWY--TGYSEEQLLECSRLMVTYHQKAGSGKLTGVYR 339
+AA+A+Y A+ + ++ W + TGYSE++L C+ +M+ + V+R
Sbjct: 214 IAASAVYCARIVIGRYPLWNNDLKICTGTGYSEKELRSCAMVMIELCNEICRDGTMHVFR 273
Query: 340 KYSSLKY---GCAAKVE 353
K+SS Y C AK E
Sbjct: 274 KFSSRDYCEVACVAKRE 290
>Medtr5g011900.1 | amine-terminal domain cyclin | LC |
chr5:3502095-3501016 | 20130731
Length = 241
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXX 159
+ L ++YI+++ FYKK E S+ Y SQ +I R L+D +I +H K
Sbjct: 64 EKLVAMKYIEELNKFYKKDEGSTSTGD-YAVSQSNIYISRRPKLLDRVIGIHTKYAISQE 122
Query: 160 XXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNE 219
+N++DRFL ++V +KL+LVG+ A LIA KY + V+ F+ + D YTR +
Sbjct: 123 SLFLAMNIVDRFLVARSVREEKLRLVGMGAWLIAYKYGGIWHLKVDTFVTLPDNPYTRAQ 182
Query: 220 VLNMEKLMVNTLQFNLSVPTPYVFMRRFLKA----AYSDKKLELLSFFLIELCLVECKML 275
+L +E+ L L+V TP+ F+ F KA Y++ LE +++FL EL M+
Sbjct: 183 ILWIEEETSGALNRKLTVSTPFHFLSLFFKAPPDDTYNNFLLENMTYFLSELG-----MI 237
Query: 276 KFSP 279
F+P
Sbjct: 238 NFTP 241
>Medtr5g044040.1 | amine-terminal domain cyclin | LC |
chr5:19364442-19364868 | 20130731
Length = 128
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 55/73 (75%)
Query: 165 VNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLNME 224
+N++DRFLA V R++LQLVG++AML+ KYEE+ P V DF+ ++D+AY+ ++L ME
Sbjct: 11 INIVDRFLAINLVSRRELQLVGISAMLMTSKYEEIWPPEVNDFVCLSDRAYSHEQILIME 70
Query: 225 KLMVNTLQFNLSV 237
K ++ L++ L+V
Sbjct: 71 KTIMGMLEWTLTV 83
>Medtr1g032850.1 | carboxy-terminal domain cyclin | HC |
chr1:11757673-11761366 | 20130731
Length = 555
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 138 KMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTV-IRKKLQLVGVTAMLIACKY 196
+ R+ ++ W++E Y+ +NL+DRFL+ + LQ+VG+ + +A +
Sbjct: 370 QQRSRMVHWIVEHSYRKQLRPETMFLAINLLDRFLSKGYFKAERNLQIVGIACLTLATRI 429
Query: 197 EEVSV--PTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD 254
EE + I Y+R EV+ ME ++ L+F PT Y F+ +LKAA +D
Sbjct: 430 EENQQYNRVNQKNFYIEKSVYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCFYLKAANAD 489
Query: 255 KKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQ 314
+E L L L L + PS +AAA + A L Q K K + EE
Sbjct: 490 AVVEKRVTCLALLALSGPDQLCYWPSTIAAAIVILASLELNQ-KASHKVIGIHIRSKEEN 548
Query: 315 LLEC 318
L EC
Sbjct: 549 LHEC 552
>Medtr5g015670.1 | carboxy-terminal domain cyclin | HC |
chr5:5464504-5462357 | 20130731
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 136 NEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKK---LQLVGVTAMLI 192
N ++ AI DW+ K +N DRFL+ +++ K +QL+ V + I
Sbjct: 101 NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSI 158
Query: 193 ACKYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYV----FMRRFL 248
A K EE SVP + ++ + + + + NME L+++TL++ + +PTP+ F +F
Sbjct: 159 AAKMEEQSVPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFC 216
Query: 249 KAAYSDKKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTA 290
+ S+ + + ++ + + + ++ PS +A+A+I A
Sbjct: 217 NGSRSETIITKATQHIVTM-VKDFNLMNQRPSTIASASILAA 257
>Medtr2g005960.1 | amine-terminal domain cyclin | LC |
chr2:402942-401842 | 20130731
Length = 234
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 95 ACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSP----------AYMTSQFDIN----EKMR 140
A D + +A EY+D ++ YK T K S P + D++ + +
Sbjct: 110 ADDTINNMAKAEYLDKLHQLYKLTTKRSIPHPDFSCLFAGSLTFEPENHDVDMETEDAIN 169
Query: 141 AILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVS 200
+ +DWL++VHY+ +N+IDR+L+ ++ ++ L LV + +M +A KY+E+S
Sbjct: 170 NLNVDWLVKVHYRLELQTEALFLTINIIDRYLSLTSIPKRDLMLVAICSMSLADKYKEIS 229
>Medtr3g100710.1 | carboxy-terminal domain cyclin | HC |
chr3:46343463-46340451 | 20130731
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 134 DINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKK---LQLVGVTAM 190
D++ + R ++DW+ +V +N +DRFL+ + + +QL+ V +
Sbjct: 91 DLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSVYEFPKGRAWTMQLLAVACL 150
Query: 191 LIACKYEEVSVPTVEDFILITDK-AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLK 249
+A K EE +VP D + K + + ME L+++TL++ + TP+ F+ FL
Sbjct: 151 SLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIECFLS 210
Query: 250 AAYSDKKLELLSFF-----LIELCLVECKMLKFSPSLLAAA 285
D K L S LI + L+F PS +AAA
Sbjct: 211 KIKDDDKSSLSSSISRSTQLISSTIKGLDFLEFKPSEIAAA 251
>Medtr4g080990.1 | carboxy-terminal domain cyclin | HC |
chr4:31294716-31295744 | 20130731
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 134 DINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKK---LQLVGVTAM 190
D++ R +DW+ +V +N +DRFL+ ++ +QL+ V +
Sbjct: 86 DLDFGARNEAIDWIQKVQSHFGFGPLCVYLSINYMDRFLSAYQFPERRDWSMQLLAVACL 145
Query: 191 LIACKYEEVSVPTVEDFILITDK-AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLK 249
+A K +E VP + + + K + + +E L++ TL++ + TP+ F+ FL
Sbjct: 146 SLAAKVDETDVPRILELQIGESKFVFEAKTIQKIELLVLTTLKWRMQAITPFSFIEYFLS 205
Query: 250 AAYSDK-----KLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTS 304
DK + L LI + L+F PS + AAA+ T +Q +K+
Sbjct: 206 KINDDKSSLNNSIILQCTQLISSTIKSPDFLEFKPSEI-AAAVATYVVEEFQAIDSSKSI 264
Query: 305 EWYTGYSE-EQLLEC 318
Y E E+LL+C
Sbjct: 265 STLIQYIEKERLLKC 279
>Medtr5g032550.1 | carboxy-terminal domain cyclin | HC |
chr5:13982616-13985265 | 20130731
Length = 346
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 134 DINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRK---KLQLVGVTAM 190
D++ +R +DW+ + H VN +DRFL+ R +QL+ V
Sbjct: 86 DLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACF 145
Query: 191 LIACKYEEVSVPTVEDFILITDK-AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLK 249
+A K EEV VP D + K + + ME +++++L + + TP F+ FL
Sbjct: 146 SLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLA 205
Query: 250 A----AYSDKKLELLSFFLIELCLVECKMLKFSPSLLAAA 285
Y DK L S LI + L+F S +AAA
Sbjct: 206 KISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAA 245
>Medtr5g032550.2 | carboxy-terminal domain cyclin | HC |
chr5:13982619-13985265 | 20130731
Length = 272
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 134 DINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRK---KLQLVGVTAM 190
D++ +R +DW+ + H VN +DRFL+ R +QL+ V
Sbjct: 86 DLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACF 145
Query: 191 LIACKYEEVSVPTVEDFILITDK-AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLK 249
+A K EEV VP D + K + + ME +++++L + + TP F+ FL
Sbjct: 146 SLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLA 205
Query: 250 ----AAYSDKKLELLSFFLIELCLVECKMLKFSPSLLAAA 285
Y DK L S LI + L+F S +AAA
Sbjct: 206 KISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAA 245