Miyakogusa Predicted Gene
- Lj1g3v3329390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3329390.1 Non Characterized Hit- tr|G7KSG0|G7KSG0_MEDTR
Helicase, putative OS=Medicago truncatula
GN=MTR_7g080,89.54,0,DEAD-like helicases superfamily,Helicase,
superfamily 1/2, ATP-binding domain; helicase superfamily
,CUFF.30387.1
(981 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g080730.1 | superkiller viralicidic activity-like protein ... 1769 0.0
Medtr8g101340.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein... 907 0.0
Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC | chr5:2940354... 765 0.0
Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein... 553 e-157
Medtr5g036660.1 | DEAD-box ATP-dependent RNA helicase ISE2 | HC ... 251 2e-66
Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | ... 115 2e-25
Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | ... 115 2e-25
Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helic... 109 1e-23
Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 99 1e-20
Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa hel... 99 2e-20
Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helic... 99 2e-20
Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helic... 99 2e-20
Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helic... 99 2e-20
Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helic... 99 2e-20
Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 95 3e-19
Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 94 1e-18
Medtr4g008770.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 82 2e-15
Medtr2g030905.1 | U5 small nuclear ribonucleoprotein 200 kDa hel... 79 2e-14
Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | ... 62 3e-09
Medtr1g007510.1 | DNA polymerase theta-like protein | HC | chr1:... 62 4e-09
>Medtr7g080730.1 | superkiller viralicidic activity-like protein |
HC | chr7:30721960-30732583 | 20130731
Length = 983
Score = 1769 bits (4582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 857/985 (87%), Positives = 908/985 (92%), Gaps = 6/985 (0%)
Query: 1 MGSLKRKSP---EEPTTQLQRGEELQYDCVHDVSYPHGYIHXXXXXXXXXTHTEPAKKFP 57
MGSLKRKSP EEP+ Q + L +DCVHDVSYPHGY+H T EPAK FP
Sbjct: 1 MGSLKRKSPPGEEEPSPSHQAQQPL-HDCVHDVSYPHGYVHPPPSSSSSSTK-EPAKTFP 58
Query: 58 FTLDPFQSQAITCIENGESVMVSAHTSAGKTVVALYAIAMSLRDGQRVIYTSPIKALSNQ 117
FTLDPFQSQ+ITC+EN ESVMVSAHTSAGKTVVALYAIAMSLR+ QRVIYTSPIKALSNQ
Sbjct: 59 FTLDPFQSQSITCLENSESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTSPIKALSNQ 118
Query: 118 KYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEITREVAWIIFDEVHYM 177
KYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSE+TREVAWIIFDEVHYM
Sbjct: 119 KYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYM 178
Query: 178 RDRERGVVWEESIVMSPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQ 237
RDRERGVVWEESIVMSPKN+RFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQ
Sbjct: 179 RDRERGVVWEESIVMSPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQ 238
Query: 238 HYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEE 297
HYIFPSG +GLYLVVDEKGKFREDSFQK+LNAL+P ++GDRKK+N K+ KGL+LGK EE
Sbjct: 239 HYIFPSGSEGLYLVVDEKGKFREDSFQKALNALIPAADGDRKKENAKWQKGLVLGKAAEE 298
Query: 298 SDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDML 357
SDIFK+VKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGD EKDNIEKIFW AMDML
Sbjct: 299 SDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGDIEKDNIEKIFWCAMDML 358
Query: 358 SDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNM 417
SDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNM
Sbjct: 359 SDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNM 418
Query: 418 PAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGIDERGICILMVDEKLEPSTAKMM 477
PAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGID+RG+CILMVDEK+EPSTAK M
Sbjct: 419 PAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGIDDRGVCILMVDEKMEPSTAKNM 478
Query: 478 VKGAADSLNSAFHLSYNMLLNQMRCEDGDPENLLRNSFYQFQADRAIPDHEKQIKALXXX 537
VKGAADSLNSAFHLSYNM+LNQMRCEDGDPENLLRNSF+QFQADRAIPD EKQIK L
Sbjct: 479 VKGAADSLNSAFHLSYNMILNQMRCEDGDPENLLRNSFFQFQADRAIPDLEKQIKTLEEE 538
Query: 538 XXXXXXXXXNSLKDYYHLLEQHRSLNKEVRDIVLSPRHCLPFLQPGRLVSLQCTXXXXXX 597
+SLKDYY+LLEQHRSLNKEV DIV+SPRHCLP+LQPGRLVSLQCT
Sbjct: 539 RESIVIDEEDSLKDYYNLLEQHRSLNKEVHDIVISPRHCLPYLQPGRLVSLQCTSSEEDL 598
Query: 598 X-XXXEDQLTWGLVINFERVKSVSEDDVSIKPEDASYNVDILTRCMVSKDKIGKKSVKIV 656
EDQLTWGL+INFER+K VSEDD +IKPEDASY VDILTRC+V+KDK+GKKSV+IV
Sbjct: 599 VPIFIEDQLTWGLIINFERIKGVSEDDANIKPEDASYKVDILTRCVVTKDKLGKKSVEIV 658
Query: 657 PLKEVGEPLVVSVPISQINTISSLRLYIPKDLLSLETRQNTLKKVLETLSRFGEKGLPLL 716
PLKE GEP+VVS+PISQ+N ISSLRLYIPKDLL LE R+NTLKKV+ETLSRF EKGLPLL
Sbjct: 659 PLKERGEPIVVSIPISQVNAISSLRLYIPKDLLPLEARENTLKKVMETLSRFSEKGLPLL 718
Query: 717 DPEEDMKIQSNSYKKASRRIEALESLFEKHEIAKSPLIKQKLKVLQRKQELTARIKSIKK 776
DPEEDMKIQSNSYKKASRRIEALE LFE+HEIAKSPLIKQKLKV QRKQELTA+IKSIKK
Sbjct: 719 DPEEDMKIQSNSYKKASRRIEALERLFERHEIAKSPLIKQKLKVFQRKQELTAKIKSIKK 778
Query: 777 TIRSSTVLAFKDELKARKRVLRRLGYATSDNVVELKGKVACEISSADELILTELMFSGVL 836
T+RSST LAFKDELKARKRVLRRLGYATSDNVV+LKGKVACEISSADEL LTELMF+GV
Sbjct: 779 TLRSSTTLAFKDELKARKRVLRRLGYATSDNVVDLKGKVACEISSADELTLTELMFNGVF 838
Query: 837 KDIKVEEMVSLLSCLVWREKIHDGAKPREELDLLFAQLQDTARRVAQLQLECKVEIDVES 896
KDIKVEEM+SLLSC VWREKI+D AKPREELDLL+AQLQDTARRVAQLQLECKV+IDVE+
Sbjct: 839 KDIKVEEMISLLSCFVWREKINDAAKPREELDLLYAQLQDTARRVAQLQLECKVQIDVET 898
Query: 897 FVKSFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLIEAAKSIGET 956
FVKSFRPDIME VYAWAKGSKFYEIMEITQVFEGSLIR+IRRLEEVLQQLIEAAKSIGE
Sbjct: 899 FVKSFRPDIMEVVYAWAKGSKFYEIMEITQVFEGSLIRSIRRLEEVLQQLIEAAKSIGEI 958
Query: 957 QLETKFEEAVSKIKRDIVFAASLYL 981
+LE KFEEAVSKIKRDIVFAASLYL
Sbjct: 959 ELEAKFEEAVSKIKRDIVFAASLYL 983
>Medtr8g101340.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
HC | chr8:42553280-42543791 | 20130731
Length = 984
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/998 (48%), Positives = 649/998 (65%), Gaps = 50/998 (5%)
Query: 5 KRKSPE--------EPTTQLQRGEELQYDCVHDVSYPHGYIHXXXXXXXXXTHTEP---- 52
KR PE + ++Q ++ + CVH+V+ P Y T + P
Sbjct: 16 KRSEPEPVSTADGGDTSSQPKKCRSSECTCVHEVAVPINYT-STKDESLHGTLSNPLHNG 74
Query: 53 --AKKFPFTLDPFQSQAITCIENGESVMVSAHTSAGKTVVALYAIAMSLRDGQRVIYTSP 110
AK +PFTLDPFQ +I C+E ESV+VSAHTSAGKT +A YAIAMS RD QRVIYTSP
Sbjct: 75 TMAKTYPFTLDPFQQVSIACLERNESVLVSAHTSAGKTAIAEYAIAMSFRDKQRVIYTSP 134
Query: 111 IKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEITREVAWII 170
+KALSNQKYRE +EF+DVGLMTGDVT+ PNA+CLVMTTEI R M Y+GSE+ +EVAW+I
Sbjct: 135 LKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRGMLYRGSEVLKEVAWVI 194
Query: 171 FDEVHYMRDRERGVVWEESIVMSPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTD 230
FDE+HYM+DRERGVVWEESI+ P + VFLSAT+ NA EFA+W+ +H+QPCH+VYTD
Sbjct: 195 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHVVYTD 254
Query: 231 YRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPP--SEGDRKKDNGKFHKG 288
+RPTPLQHY+FP GG GLYLVVDE +FRED+F K + V EG K NG+F KG
Sbjct: 255 FRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFLKVEDTFVKQKLGEGKGGKTNGRFGKG 314
Query: 289 LMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEK 348
SDI+KIVKMI++R++ PVI+FSFS+RECE AM M+K+D N +EKD +E
Sbjct: 315 GSASGG---SDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNSQEEKDTVEH 371
Query: 349 IFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFAT 408
+F +AM L+++D+ LP + MLPLL+RGI VHHSGLLP++KE++E+LFQEGL+K LFAT
Sbjct: 372 VFQNAMLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 431
Query: 409 ETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGIDERGICILMVDEK 468
ETF++GLNMPAKTVVFT V+K+DGD R+I SGEYIQMSGRAGRRG DERGICI+M+DE+
Sbjct: 432 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDEQ 491
Query: 469 LEPSTAKMMVKGAADSLNSAFHLSYNMLLNQMRCEDGD--PENLLRNSFYQFQADRAIPD 526
+E + K MV G L S F LSY +LN M +G E+++RNSF+QFQ ++ +PD
Sbjct: 492 MEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEKTLPD 551
Query: 527 HEKQIKALXXXXXXXXXXXXNSLKDYYHLLEQHRSLNKEVRDIVLSPRHCLPFLQPGRLV 586
K++ L + +Y+ L L K++ ++ P L FL PGRL+
Sbjct: 552 VGKRVSMLEQEVALLDAAGEAEVSEYHKLKLDLAQLEKKMMSQIIRPEMILYFLVPGRLI 611
Query: 587 SLQCTXXXXXXXXXXEDQLTWGLVINFERVKSVSEDDVSIKPEDASYNVDILTRCM--VS 644
++ E WG +K Y VD L C +
Sbjct: 612 KVR------------EGGTDWGW----------GVVVNVVKKPVGGYIVDTLLHCSPGSN 649
Query: 645 KDKIGKKSVKIVPLKEVGEPLVVSVPISQINTISSLRLYIPKDLLSLETRQNTLKKVLET 704
++ I K P E GE VV V + I+ +S LR+Y+P DL LE RQ+ L V E
Sbjct: 650 ENSIRPKPCPPRP-GEKGEMHVVPVQLPLISALSKLRIYVPPDLRPLEARQSILLAVQEL 708
Query: 705 LSRFGEKGLPLLDPEEDMKIQSNSYKKASRRIEALESLFEKHEIAKSPLIKQKLKVLQRK 764
+RF +GLP L+P +DM ++ + + +IE LE H + K + Q +K +RK
Sbjct: 709 GNRF-PQGLPKLNPVKDMDVRDSEIVELVNQIEELEKKLFDHPMHKIQDVDQ-IKCFERK 766
Query: 765 QELTARIKSIKKTIRSSTVLAFKDELKARKRVLRRLGYATSDNVVELKGKVACEISSADE 824
E+ I+ +K +R S + F++ELK R RVL++LG+ SD+VV+LKG+ AC I + DE
Sbjct: 767 AEVNHEIQQLKAKMRDSQLQKFREELKNRSRVLKKLGHIDSDSVVQLKGRAACLIDTGDE 826
Query: 825 LILTELMFSGVLKDIKVEEMVSLLSCLVWREKIHDGAKPREELDLLFAQLQDTARRVAQL 884
L++TELMF+G D+ ++ +L SC + EK + + R EL QLQD+ARR+A++
Sbjct: 827 LLVTELMFNGTFNDLDHHQVAALASCFIPIEKSSEQIQLRSELARPLQQLQDSARRIAEI 886
Query: 885 QLECKVEIDVESFVKS-FRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVL 943
+ ECK+E++V +V+S RP +M+ +Y+W+KGS F ++ ++T +FEGS+IRA RRL+E L
Sbjct: 887 EHECKLEVNVNEYVESTVRPFLMDVIYSWSKGSSFADVTQMTDIFEGSIIRAARRLDEFL 946
Query: 944 QQLIEAAKSIGETQLETKFEEAVSKIKRDIVFAASLYL 981
QL AA ++GE LE KF A ++R I+FA SLYL
Sbjct: 947 NQLRAAADAVGEADLEKKFAAASESLRRGIIFANSLYL 984
>Medtr5g069360.1 | DEAD/DEAH-box RNA helicase | HC |
chr5:29403540-29411488 | 20130731
Length = 967
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/977 (41%), Positives = 607/977 (62%), Gaps = 72/977 (7%)
Query: 26 CVHDVSYPHGYIHXXXXXXXXXTHTEP------AKKFPFTLDPFQSQAITCIENGESVMV 79
CVH V+ P YI T + P AK FPFTLD FQ +I C+E ESV+V
Sbjct: 42 CVHKVAVPIDYI-STKDEALYGTLSSPLHNGTMAKTFPFTLDQFQQVSIACLERNESVLV 100
Query: 80 SAHTSAGKTVVALYAIAMSLRDGQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTID 139
SAHTSAGKT +A YAIAMSLRD ++V+YTSP+K+L+NQKY E ++EF+DVGL+TGD+TI
Sbjct: 101 SAHTSAGKTAIAEYAIAMSLRDKRKVLYTSPLKSLNNQKYSELRQEFTDVGLITGDITIY 160
Query: 140 PN-ASCLVMTTEIWRSMQYKGSEITREVAWIIFDEVHYMRDRERGVVWEESIVMSPKNSR 198
P+ A CL+MTTEI R M Y+GSE+ EV W+IFDE+H M+D ERGVVWEESI++ P +
Sbjct: 161 PSEAKCLIMTTEILRGMLYRGSEVLNEVDWVIFDEIHCMKDGERGVVWEESIILLPPTVK 220
Query: 199 FVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKF 258
VFLSAT+ NA EFA+W++ + +QPCH++ T++RPTP+QHY+FP GG LY +VDE +F
Sbjct: 221 MVFLSATLSNALEFAEWISTLRKQPCHVICTNFRPTPIQHYVFPIGGRRLYPIVDENEEF 280
Query: 259 REDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILF 318
D+F + N + G+ G + D+FKIVKMI+++++ P+I+F
Sbjct: 281 MGDNFVMAENTFLKQKLGE-----------------GNKGDMFKIVKMIMEKKFQPIIVF 323
Query: 319 SFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLKRGI 378
SFSK+ECE ++K+D N +EK+ + IF A+ L+++D+ L + +LP L+RGI
Sbjct: 324 SFSKKECEHNLKSISKLDFNTQEEKERVLDIFEMAVLTLNEEDRSLCAIKEVLPHLQRGI 383
Query: 379 GVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWI 438
G+HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF++V+K+DG + R+I
Sbjct: 384 GIHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFSSVKKWDGHEHRYI 443
Query: 439 TSGEYIQMSGRAGRRGIDERGICILMVDEKLEPSTAKMMVKGAADSLNSAFHLSYNMLLN 498
SGEYIQMSGRAGRRG DE GICI+M+DE++ + + +V G L S F L Y+ +LN
Sbjct: 444 RSGEYIQMSGRAGRRGKDEHGICIIMIDEQMNKNNLEDIVLGKPAPLVSTFRLRYHSILN 503
Query: 499 QMRCEDG--DPENLLRNSFYQFQADRAIPDHEKQIKALXXXXXXXXXXXXNSLKDYY--- 553
M DG E+L+ NSF+QFQ ++ +P+ +K++ L + +Y+
Sbjct: 504 LMSRADGQFSAEHLISNSFHQFQYEKTLPEMKKRVSMLEQKLALLDAAEKAEVSEYHKLK 563
Query: 554 -HLLEQHRSLNKEVRDIVLSPRHCLPFLQPGRLVSLQCTXXXXXXXXXXEDQLTWGLVIN 612
L E R ++K++R P + LPFL PGRL+ ++
Sbjct: 564 LKLAELQRKMSKKIR-----PDNILPFLCPGRLIKVR----------------------- 595
Query: 613 FER--VKSVSEDDVSIKPEDASYNVDILTRCMVSKDKIGKKSVKIVPLK----EVGEPLV 666
ER ++ Y VD L C + + S+++ P E GE V
Sbjct: 596 -ERGTDWGWGVVVDVVQEPVDDYIVDTLLHCSPGSN---ENSLQLKPCPPFPGEKGEMHV 651
Query: 667 VSVPISQINTISSLRLYIPKDLLSLETRQNTLKKVLETLSRFGEKGLPLLDPEEDMKIQS 726
V V ++ I +S +++ +P D+ L+ RQ+ L V E RF + GLP ++P +D ++
Sbjct: 652 VPVQLTLIYALSQVKISLPHDIRPLKARQDILLGVQEICDRFPQ-GLPTINPAQDNVLKD 710
Query: 727 NSYKKASRRIEALESLFEKHEIAK-SPLIKQKLKVLQRKQELTARIKSIKKTIRSSTVLA 785
+ + + +E LE H + K + K + QRK +L I+ +K+ ++ S +
Sbjct: 711 SEIVELVKEMENLEKKLLDHPMHKIQDVEKNNITHFQRKADLNHEIQQLKEKMQYSQLQK 770
Query: 786 FKDELKARKRVLRRLGYATSDNVVELKGKVACEISSADELILTELMFSGVLKDIKVEEMV 845
F++ELK R +VL+ LG+ +D+VV+LKGK AC I D L++TEL+F+G + ++
Sbjct: 771 FREELKNRSQVLKELGHIDADSVVQLKGKAACLIDMDDVLLVTELLFNGTFNHLDHHQVT 830
Query: 846 SLLSCLVWREKIHDGAKPREELDLLFAQLQDTARRVAQLQLECKVEIDVESFVKSF-RPD 904
+L SC + +K +P L+ QLQD+ARR+A+++ + ++ ++V +VKS RP
Sbjct: 831 ALASCFMPIDKSSKKIQPTSLLERPLQQLQDSARRIAEIECKYRLRVNVNKYVKSTERPV 890
Query: 905 IMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLIEAAKSIGETQLETKFEE 964
IM+A+++W+KGS F ++ ++T +FEGS+I A RRL L QL A+++GE L KF
Sbjct: 891 IMDAIHSWSKGSSFADVTQMTDIFEGSIITAARRLVGFLNQLRAGAEAVGENDLAKKFTA 950
Query: 965 AVSKIKRDIVFAASLYL 981
A I+R I+F SLYL
Sbjct: 951 ASESIRRGIIFTDSLYL 967
>Medtr3g462290.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein | HC
| chr3:24871545-24853513 | 20130731
Length = 1334
Score = 553 bits (1424), Expect = e-157, Method: Compositional matrix adjust.
Identities = 352/998 (35%), Positives = 534/998 (53%), Gaps = 77/998 (7%)
Query: 53 AKKFPFTLDPFQSQAITCIENGESVMVSAHTSAGKTVVALYAIAMSLRDGQRVIYTSPIK 112
A +FPF LD FQ +AI +E GESV V+AHTSAGKTVVA YA A++ + R +YT+PIK
Sbjct: 342 ALEFPFELDAFQKKAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIK 401
Query: 113 ALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEITREVAWIIFD 172
+SNQKYR+F +F DVGL+TGDV++ P ASCL+MTTEI RSM Y+G++I R++ W+IFD
Sbjct: 402 TISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 460
Query: 173 EVHYMRDRERGVVWEESIVMSPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYR 232
EVHY+ D +RGVVWEE I+M P++ + LSATVPN EFADW+ + Q+ + T R
Sbjct: 461 EVHYVNDVDRGVVWEEVIIMLPRHINIILLSATVPNTVEFADWIGRTKQKEIRVTGTTKR 520
Query: 233 PTPLQHYIFPSGGDGLYLVVDEKGKF--------REDSFQKSLNALV---PPSEGDRKKD 281
P PL+H +F SG + + E+ F ++ S +K L A V P D
Sbjct: 521 PVPLEHCLFYSGE---FYKICEREIFLPQGLRAAKDASRKKHLTAGVSSGPKPGTSAGHD 577
Query: 282 NGKFHK----------GLMLGKVG---------------EESDIFKIVKMIIQRQYDPVI 316
N + K G G E S ++ + ++ PV+
Sbjct: 578 NARGQKRENTPRTKQYGTNFSGTGSGYHNNGNGQSRWRQEASMWLMLINKLSKKSLLPVV 637
Query: 317 LFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLKR 376
+F FSK C+ A M DL EK I A L D+ LPQV + LL+R
Sbjct: 638 IFCFSKNRCDKSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVESLLRR 697
Query: 377 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFR 436
GIGVHH+GLLPI+KEV+E+LF G+IK LF+TETF++G+N PA+TVVF VRKFDG +FR
Sbjct: 698 GIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTVRKFDGKEFR 757
Query: 437 WITSGEYIQMSGRAGRRGIDERGICILMV-DEKLEPSTAKMMVKGAADSLNSAFHLSYNM 495
+ GEY QM+GRAGRRG+D G ILM DE E S K ++ G+A L S F L+Y M
Sbjct: 758 QLLPGEYTQMAGRAGRRGLDNIGTVILMCRDELPEESDLKHVIVGSATRLESQFRLTYIM 817
Query: 496 LLNQMRCEDGDPENLLRNSFYQFQADRAIPDHEKQIKALXXXXXXXXXXXXN--SLKDYY 553
+L+ +R E+ E++L+ SF +F A +P+ ++ +K ++++YY
Sbjct: 818 ILHLLRVEELKVEDMLKRSFAEFHAQEKLPEMQQLLKTKLNQPKRVIECIKGEPTIEEYY 877
Query: 554 HLLEQHRSLNKEVRDIVLSPRHCLPFLQPGRLVSLQCTXXX------XXXXXXXEDQLTW 607
L + + N ++ + +L + PFL GR+V ++ ++L
Sbjct: 878 DLYMEAETYNNQISEAILLSPNVTPFLNTGRVVVIKSESAQDHLLAVIVKTPSPSNKLYI 937
Query: 608 GLVI---------------NFERVKSVSEDDVSIKPEDASYNVDILTRCMVSKDKIGKKS 652
VI N + S + + P+ VD T + ++ G +
Sbjct: 938 VFVIRPDMSFPVENASSGGNSQDKSSTFDQGFFVMPKSRRGLVDEYTTSVSARKGRGVIN 997
Query: 653 VKIVPLKEVGEPLVVSVPISQIN-----TISSLRLYIPKDLLSLETRQNTLKK---VLET 704
+K L G +S + +++ I S ++ I + L + + K +L+
Sbjct: 998 IK---LPHRGSACGMSYEVREVDIKEFLCICSSKIKIDQVGLLEDVSSSVYAKTVKLLQD 1054
Query: 705 LSRFGEKGLPLLDPEEDMKIQSNSYKKASRRIEALESLFEKHEIAKSPLIKQKLKVLQRK 764
L G K P LDP +D+K++ + R+ L +++ + + LK+ +
Sbjct: 1055 LKSDGNKYPPALDPVKDLKLREAKLVETYRKWTKLLEKMSQNQCNGCIKLAEHLKLAKEI 1114
Query: 765 QELTARIKSIKKTIRSSTVLAFKDELKARKRVLRRLGYATSDNVVELKGKVACEISSADE 824
+ + S++ + + D + R VL+ +G D VV++KG+VACE++S +E
Sbjct: 1115 KAHKEEVCSLQYQMSDEALQQMPD-FQGRIDVLKEIGCIDEDLVVQMKGRVACEMNSGEE 1173
Query: 825 LILTELMFSGVLKDIKVEEMVSLLSCLVWREKIHDGAKPREELDLLFAQLQDTARRVAQL 884
LI TE +F L +++ EE+V+L+S V+++K L +L TA R+ +L
Sbjct: 1174 LICTECLFENQLDELEPEEVVALMSAFVFQQKNASEPSLTPRLSDAKNRLYKTAIRLGEL 1233
Query: 885 QLECKVEIDVESFVK-SFRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVL 943
Q + + I E + + + + ++E VY WAKG+ F +I E+T V EG ++R I RL+E
Sbjct: 1234 QAQFNLPISPEEYAQENLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETC 1293
Query: 944 QQLIEAAKSIGETQLETKFEEAVSKIKRDIVFAASLYL 981
++ +A +G + L K E A + IKRDIVFAASLY+
Sbjct: 1294 REFKNSAAIMGNSALCKKMEIASNAIKRDIVFAASLYI 1331
>Medtr5g036660.1 | DEAD-box ATP-dependent RNA helicase ISE2 | HC |
chr5:16017947-16009934 | 20130731
Length = 1155
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 256/485 (52%), Gaps = 49/485 (10%)
Query: 51 EPAKKFPFTLDPFQSQAITCIENGESVMVSAHTSAGKTVVALYAIAMSLRDGQRVIYTSP 110
E A + F +D FQ QAI G SV+VSA TS+GKT++A A ++ G+R+ YT+P
Sbjct: 137 ELASVYDFRIDKFQRQAIQAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTP 196
Query: 111 IKALSNQKYREFKEEFSD--VGLMTGDVTIDPNASCLVMTTEIWRSMQYK-------GSE 161
+KALSNQK+REF+E F D VGL+TGD ++ +A L+MTTEI R+M Y+ GS
Sbjct: 197 LKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSG 256
Query: 162 ITREVAWIIFDEVHYMRDRERGVVWEESIVMSPKNSRFVFLSATVPNAKEFADWVAKVHQ 221
+ V I+ DEVHY+ D RG VWEE ++ PK + + LSATV N E A W+ ++H
Sbjct: 257 LV-NVDVIVLDEVHYLSDISRGTVWEEIVIYCPKAVQLICLSATVANPDELAGWIGQIHG 315
Query: 222 QPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNAL------VPPSE 275
+V + RP PL + S + L ++D+KG + + + SLN L P +
Sbjct: 316 G-TELVTSSKRPVPLNWHF--SLKNSLLPLLDDKGT--QMNRKLSLNYLKLQAAEAKPYK 370
Query: 276 GDRKKDNGKFHKG----------LMLGKVGEESDIFKI----VKMII-------QRQYDP 314
D + +G ++ + ++DI I V II R P
Sbjct: 371 DDWPRKRNSRKRGTRTSYDIDDRMLEQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDMLP 430
Query: 315 VILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIF-WSAMDMLSDDDKKLPQVSNMLPL 373
+ F FS++ C+ A+Q + D DE + E + + D + V +L
Sbjct: 431 AVWFIFSRKGCD-AAVQYVE-DCKLLDECEASEVLLALKRFRIQYPDAVRETAVKGLL-- 486
Query: 374 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGD 433
+G+ HH+G LP+ K IE LFQ GL+K +FATET + G+NMPA+T V +++ K
Sbjct: 487 --QGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRSDT 544
Query: 434 KFRWITSGEYIQMSGRAGRRGIDERGICILMVDEKLEPSTAKMMVKGAADSLNSAFHLSY 493
+TS E +QM+GRAGRRGIDE G +L+ ++ + L S F SY
Sbjct: 545 GRTLLTSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEECCKVLFSGLEPLVSQFTASY 604
Query: 494 NMLLN 498
M+LN
Sbjct: 605 GMVLN 609
>Medtr3g025300.1 | U5 small nuclear ribonucleoprotein helicase | HC
| chr3:7719529-7688875 | 20130731
Length = 2081
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 188/431 (43%), Gaps = 84/431 (19%)
Query: 69 TCIENGESVMVSAHTSAGKTVVA----LYAIAMSLRDGQ------RVIYTSPIKALSNQK 118
T E+++V A T AGKT +A L+ I +DG +++Y +P+KAL+ +
Sbjct: 448 TVYGTNENILVCAPTGAGKTNIAMISILHEIGQHFKDGYLHKDKFKIVYVAPMKALAAEV 507
Query: 119 YREFKEEFSDVGL----MTGDVTIDPN----ASCLVMTTEIWRSMQYKGSEITRE--VAW 168
F + S + + +TGD+ + N +V T E W + K S+++ V
Sbjct: 508 TSTFSQRLSPLNMSVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKL 567
Query: 169 IIFDEVHYMRDRERGVVWEESIVMSPKNS-------RFVFLSATVPNAKEFADWVAKVHQ 221
+I DEVH + D +RG V E + + + R V LSAT+PN E A ++
Sbjct: 568 LIIDEVHLLND-DRGPVIEALVARTLRQVESSQSMIRIVGLSATLPNYLEVAQFLRVNPD 626
Query: 222 QPCHIVYTDYRPTPL-QHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDRKK 280
+ YRP PL Q YI + P+ R +
Sbjct: 627 TGLFFFDSSYRPVPLAQQYI----------------------------GISEPNFAARNE 658
Query: 281 DNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGD 340
+L + ++ V I++ + ++ F S+++ A ++ ++ D
Sbjct: 659 ---------LLNVI-----CYRKVADSIRQGHQAMV-FVHSRKDTAKTAQKLTELARAND 703
Query: 341 D----EKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEIL 396
D D F+ +++ +K L Q L + G+G+HH+G+L + + E L
Sbjct: 704 DLELFNNDTHPHYFFMKKEVVKSRNKDLVQ------LFELGMGIHHAGMLRSDRGLTERL 757
Query: 397 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSG--EYIQMSGRAGRRG 454
F EGL+K L T T + G+N+PA TVV + +D W G + +Q+ GRAGR
Sbjct: 758 FSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQ 817
Query: 455 IDERGICILMV 465
D+ G I++
Sbjct: 818 FDKSGEGIIIT 828
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 77/433 (17%)
Query: 60 LDPFQSQAITCIENGES-VMVSAHTSAGKTVVALYAIA--MSLRDGQRVIYTSPIKALSN 116
+P Q+Q + + ++ V++ A T +GKT+ A A+ + + +VIY +P+KA+
Sbjct: 1286 FNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVR 1345
Query: 117 QKYREFKEEF-SDVGL----MTGDVTIDP----NASCLVMTTEIWR--SMQYKGSEITRE 165
++ ++++ S +G MTGD T D +A+ ++ T E W S + +
Sbjct: 1346 ERMSDWRKRLVSQLGKKMVEMTGDYTPDLMALLSANIIISTPEKWDGISRNWHSRSYVTK 1405
Query: 166 VAWIIFDEVHYMRDRERGVVWEESIV-------MSPKNSRFVFLSATVPNAKEFADWVAK 218
V II DE+H + +RG + E + + + RFV LS + NA + ADW+
Sbjct: 1406 VGLIILDEIHLL-GADRGPILEVIVSRMRYISSQTERPVRFVGLSTALANAGDLADWLG- 1463
Query: 219 VHQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDR 278
V + RP PL+ +I G G Y + +N++ P+
Sbjct: 1464 VEEIGLFNFKPSVRPVPLEVHI--QGYPGKY-------------YCPRMNSMNKPA---- 1504
Query: 279 KKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLN 338
+ PV++F S+R+ A+ + + +
Sbjct: 1505 ------------------------YAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAAS 1540
Query: 339 GDDEKDNIEKIFWSAMDMLSDDDKKLPQVS--NMLPLLKRGIGVHHSGLLPILKEVIEIL 396
D+ + A++M L QVS N+ L+ GIG+HH+GL + ++E L
Sbjct: 1541 -DEHSRQFLNMPEEALEMF------LSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVEEL 1593
Query: 397 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITS--GEYIQMSGRAGRRG 454
F I+ L T T + G+N+PA V+ +DG R++ + +QM GRAGR
Sbjct: 1594 FANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQ 1653
Query: 455 IDERGICILMVDE 467
D+ G +++V E
Sbjct: 1654 FDQHGKAVILVHE 1666
>Medtr3g025300.2 | U5 small nuclear ribonucleoprotein helicase | HC
| chr3:7719529-7695186 | 20130731
Length = 1734
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 194/442 (43%), Gaps = 85/442 (19%)
Query: 59 TLDPFQSQAI-TCIENGESVMVSAHTSAGKTVVA----LYAIAMSLRDGQ------RVIY 107
+L+ QS+ T E+++V A T AGKT +A L+ I +DG +++Y
Sbjct: 437 SLNRIQSRIYQTVYGTNENILVCAPTGAGKTNIAMISILHEIGQHFKDGYLHKDKFKIVY 496
Query: 108 TSPIKALSNQKYREFKEEFSDVGL----MTGDVTIDPN----ASCLVMTTEIWRSMQYKG 159
+P+KAL+ + F + S + + +TGD+ + N +V T E W + K
Sbjct: 497 VAPMKALAAEVTSTFSQRLSPLNMSVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKS 556
Query: 160 SEITRE--VAWIIFDEVHYMRDRERGVVWEESIVMSPKNS-------RFVFLSATVPNAK 210
S+++ V +I DEVH + D +RG V E + + + R V LSAT+PN
Sbjct: 557 SDMSLSMLVKLLIIDEVHLLND-DRGPVIEALVARTLRQVESSQSMIRIVGLSATLPNYL 615
Query: 211 EFADWVAKVHQQPCHIVYTDYRPTPL-QHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNA 269
E A ++ + YRP PL Q YI
Sbjct: 616 EVAQFLRVNPDTGLFFFDSSYRPVPLAQQYI----------------------------G 647
Query: 270 LVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLA 329
+ P+ R + +L + ++ V I++ + ++ F S+++ A
Sbjct: 648 ISEPNFAARNE---------LLNVI-----CYRKVADSIRQGHQAMV-FVHSRKDTAKTA 692
Query: 330 MQMAKMDLNGDD----EKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGL 385
++ ++ DD D F+ +++ +K L Q L + G+G+HH+G+
Sbjct: 693 QKLTELARANDDLELFNNDTHPHYFFMKKEVVKSRNKDLVQ------LFELGMGIHHAGM 746
Query: 386 LPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSG--EY 443
L + + E LF EGL+K L T T + G+N+PA TVV + +D W G +
Sbjct: 747 LRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDV 806
Query: 444 IQMSGRAGRRGIDERGICILMV 465
+Q+ GRAGR D+ G I++
Sbjct: 807 MQIFGRAGRPQFDKSGEGIIIT 828
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 190/433 (43%), Gaps = 77/433 (17%)
Query: 60 LDPFQSQAITCIENGES-VMVSAHTSAGKTVVALYAIA--MSLRDGQRVIYTSPIKALSN 116
+P Q+Q + + ++ V++ A T +GKT+ A A+ + + +VIY +P+KA+
Sbjct: 1286 FNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVR 1345
Query: 117 QKYREFKEEF-SDVGL----MTGDVTIDP----NASCLVMTTEIWR--SMQYKGSEITRE 165
++ ++++ S +G MTGD T D +A+ ++ T E W S + +
Sbjct: 1346 ERMSDWRKRLVSQLGKKMVEMTGDYTPDLMALLSANIIISTPEKWDGISRNWHSRSYVTK 1405
Query: 166 VAWIIFDEVHYMRDRERGVVWEESIV-------MSPKNSRFVFLSATVPNAKEFADWVAK 218
V II DE+H + +RG + E + + + RFV LS + NA + ADW+
Sbjct: 1406 VGLIILDEIHLL-GADRGPILEVIVSRMRYISSQTERPVRFVGLSTALANAGDLADWLG- 1463
Query: 219 VHQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDR 278
V + RP PL+ +I G G Y + +N++ P+
Sbjct: 1464 VEEIGLFNFKPSVRPVPLEVHI--QGYPGKY-------------YCPRMNSMNKPA---- 1504
Query: 279 KKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLN 338
+ PV++F S+R+ A+ + + +
Sbjct: 1505 ------------------------YAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAAS 1540
Query: 339 GDDEKDNIEKIFWSAMDMLSDDDKKLPQVS--NMLPLLKRGIGVHHSGLLPILKEVIEIL 396
D+ + A++M L QVS N+ L+ GIG+HH+GL + ++E L
Sbjct: 1541 -DEHSRQFLNMPEEALEMF------LSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVEEL 1593
Query: 397 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITS--GEYIQMSGRAGRRG 454
F I+ L T T + G+N+PA V+ +DG R++ + +QM GRAGR
Sbjct: 1594 FANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQ 1653
Query: 455 IDERGICILMVDE 467
D+ G +++V E
Sbjct: 1654 FDQHGKAVILVHE 1666
>Medtr1g008600.1 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr1:991547-976147 | 20130731
Length = 2177
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 194/436 (44%), Gaps = 95/436 (21%)
Query: 76 SVMVSAHTSAGKTVVA-LYAIAMSLRDGQRVIYTSPIKALSNQKYREFKEEFSDVGLMT- 133
+++ A TSAGK+ VA + + + G+ I P ++ +K ++ +G
Sbjct: 542 NLVYCASTSAGKSFVAEILMLRKVITTGKMAILVLPYVSICTEKAEHLEKLLEPLGKHVR 601
Query: 134 ------GDVTIDPNASCLVMTTEIWRSMQYKGSEITR--EVAWIIFDEVHYMRDRERGVV 185
G ++ + S V T E S+ + E R E+ I+ DE+H + D +RG +
Sbjct: 602 SYYGNQGGGSLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDPKRGYL 661
Query: 186 WE-----------ESIVMS---------------PKNSRFVFLSATVPNAKEFADWVAKV 219
E E I S + + V +SAT+PN ADW+
Sbjct: 662 LELMLTKLRYAAGEGISKSSDGEGSGGSSDKNDPAQGLQIVGMSATMPNVAAVADWLQAA 721
Query: 220 HQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKS--LNALVPPSEGD 277
Q T++RP PL+ YI K + KS L+ +P
Sbjct: 722 LYQ------TEFRPVPLEEYI----------------KVGNSIYNKSMELSRTIP----- 754
Query: 278 RKKDNGKFHKGLMLGKVGEESD-IFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKM- 335
KG LG G++ D + ++ ++Q + V++F S++ CE A +AK
Sbjct: 755 ---------KGADLG--GKDPDHVVELCNEVVQ-EGQSVLIFCSSRKGCESTARHVAKFL 802
Query: 336 -DLNGDDEKDNIE-KIFWSAMDMLSDDDKKLPQVSNMLPLLKR----GIGVHHSGLLPIL 389
D ++N E SA++ L +K P + + P+L+ G+ HH+GL
Sbjct: 803 KSFTVDINENNCEFADITSAINSL----RKCP--AGLDPVLEETFPAGVAFHHAGLTVEE 856
Query: 390 KEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGR 449
+E++E +++GL++ L AT T + G+N+PA+ V+F R G F I Y+QM+GR
Sbjct: 857 REIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRI--GCDF--IDGTRYMQMAGR 912
Query: 450 AGRRGIDERGICILMV 465
AGR GID +G +L+
Sbjct: 913 AGRTGIDTKGESVLIC 928
>Medtr4g011450.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | HC | chr4:2793467-2800896 | 20130731
Length = 2099
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 188/455 (41%), Gaps = 92/455 (20%)
Query: 50 TEPAKKFPFTLDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIAMSLR------DG 102
+PA K L+ QS+ T + +++++ A T AGKT VA+ I + DG
Sbjct: 469 AQPAFKGMIQLNRVQSKVYETALFKSDNLLLCAPTGAGKTNVAVLTILQEIARHRNPGDG 528
Query: 103 Q------RVIYTSPIKALSNQKYREFKEEFSDVGL----MTGDVTIDPN----ASCLVMT 148
+++Y +P+KAL + + + ++GD ++ +V T
Sbjct: 529 SIDHSAYKIVYVAPMKALVTEIVGNLSNRLQEYDVKVRELSGDQSLTQKQMEETQIIVTT 588
Query: 149 TEIWRSMQYKGSE--ITREVAWIIFDEVHYMRDRERGVVWEESIVMSPKNS-------RF 199
E W + K + T+ V +I DE+H + D RG V E I + + R
Sbjct: 589 PEKWDIITRKSGDRIYTQLVKLLIIDEIHLLHD-NRGPVLESIIARTVRQIETTKDYIRL 647
Query: 200 VFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPL-QHYIFPSGGDGLYLVVDEKGKF 258
V LSAT+PN ++ A ++ H + YRP PL Q +I G
Sbjct: 648 VGLSATLPNFEDVARFLRVDHNKGLFYFDNSYRPVPLSQQFI---------------GIT 692
Query: 259 REDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILF 318
+ FQ+ + + KV E+ + V++F
Sbjct: 693 VKKPFQRY-----------------QLMNDICFEKVMAEAGKHQ------------VLIF 723
Query: 319 SFSKRECEFLAMQMAKMDLNGDD------EKDNIEKIFWSAMDMLSDDDKKLPQVSNMLP 372
S++E A + L D E +I S D++ +D K
Sbjct: 724 VHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTDLVKSNDLK--------D 775
Query: 373 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 432
LL G +HH+G+ ++++E LF G ++ L +T T + G+N+PA TV+ + ++
Sbjct: 776 LLPYGFAIHHAGMTRTDRQLVEDLFASGHVQVLVSTATLAWGVNLPAHTVIIKGTKIYNP 835
Query: 433 DKFRW--ITSGEYIQMSGRAGRRGIDERGICILMV 465
++ W ++ + +QM GRAGR D G+ I++
Sbjct: 836 ERGAWTELSPLDVMQMLGRAGRPQYDSCGMGIVVT 870
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 196/432 (45%), Gaps = 79/432 (18%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAIAMSLRDGQ----RVIYTSPIKAL 114
+P Q+Q T + N + + +V+A T +GKT+ A +AI + + G RV+Y +PI+AL
Sbjct: 1326 FNPIQTQVFTALYNSDDNALVAAPTGSGKTICAEFAILRNHKKGSDSVMRVVYVAPIEAL 1385
Query: 115 SNQKYREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSM--QYKGSEI 162
+ ++YR+++++F GL +TG+ T D ++ T E W ++ ++K +
Sbjct: 1386 AKERYRDWEKKFGG-GLKFAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKH 1444
Query: 163 TREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPKNS-RFVFLSATVPNAKEFADW 215
++V+ I DE+H + +RG V E + I +N RFV LS +V NAK+ DW
Sbjct: 1445 VQQVSLFIIDELHLI-GGQRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDW 1503
Query: 216 VAKVHQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSE 275
+ + RP PL+ +I + + K + + + +++ A+
Sbjct: 1504 IGATSHGLFNFSPV-VRPVPLEIHIQSVD------IANFKARMQAMT-KRTYTAIA---- 1551
Query: 276 GDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKM 335
+ NGK P ++F +++ +++ M
Sbjct: 1552 --QHAKNGK-----------------------------PALVFVPTRKH-----VRLTTM 1575
Query: 336 DLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSN-MLPL-LKRGIGVHHSGLLPILKEVI 393
DL D+ EK F + + + L ++S+ ML + L+ G+G H GL + +++
Sbjct: 1576 DLITYSSADSGEKSF--LLQSTKELEPFLNKISDEMLKVTLREGVGYLHEGLSSLDHDIV 1633
Query: 394 EILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW-ITSGEYIQMSGRAGR 452
LF+ G I+ + + + + A VV +DG+ + + +QM G A R
Sbjct: 1634 AQLFEAGWIQVCVLSSSMCYIVTLLAHLVVVMGTLYYDGENAQTDYPVTDLLQMMGHASR 1693
Query: 453 RGIDERGICILM 464
+D G C+++
Sbjct: 1694 PLVDHSGKCVIL 1705
>Medtr4g011450.2 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | HC | chr4:2793467-2800740 | 20130731
Length = 2072
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 188/455 (41%), Gaps = 92/455 (20%)
Query: 50 TEPAKKFPFTLDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIAMSLR------DG 102
+PA K L+ QS+ T + +++++ A T AGKT VA+ I + DG
Sbjct: 469 AQPAFKGMIQLNRVQSKVYETALFKSDNLLLCAPTGAGKTNVAVLTILQEIARHRNPGDG 528
Query: 103 Q------RVIYTSPIKALSNQKYREFKEEFSDVGL----MTGDVTIDPN----ASCLVMT 148
+++Y +P+KAL + + + ++GD ++ +V T
Sbjct: 529 SIDHSAYKIVYVAPMKALVTEIVGNLSNRLQEYDVKVRELSGDQSLTQKQMEETQIIVTT 588
Query: 149 TEIWRSMQYKGSE--ITREVAWIIFDEVHYMRDRERGVVWEESIVMSPKNS-------RF 199
E W + K + T+ V +I DE+H + D RG V E I + + R
Sbjct: 589 PEKWDIITRKSGDRIYTQLVKLLIIDEIHLLHD-NRGPVLESIIARTVRQIETTKDYIRL 647
Query: 200 VFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPL-QHYIFPSGGDGLYLVVDEKGKF 258
V LSAT+PN ++ A ++ H + YRP PL Q +I G
Sbjct: 648 VGLSATLPNFEDVARFLRVDHNKGLFYFDNSYRPVPLSQQFI---------------GIT 692
Query: 259 REDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILF 318
+ FQ+ + + KV E+ + V++F
Sbjct: 693 VKKPFQRY-----------------QLMNDICFEKVMAEAGKHQ------------VLIF 723
Query: 319 SFSKRECEFLAMQMAKMDLNGDD------EKDNIEKIFWSAMDMLSDDDKKLPQVSNMLP 372
S++E A + L D E +I S D++ +D K
Sbjct: 724 VHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTDLVKSNDLK--------D 775
Query: 373 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 432
LL G +HH+G+ ++++E LF G ++ L +T T + G+N+PA TV+ + ++
Sbjct: 776 LLPYGFAIHHAGMTRTDRQLVEDLFASGHVQVLVSTATLAWGVNLPAHTVIIKGTKIYNP 835
Query: 433 DKFRW--ITSGEYIQMSGRAGRRGIDERGICILMV 465
++ W ++ + +QM GRAGR D G+ I++
Sbjct: 836 ERGAWTELSPLDVMQMLGRAGRPQYDSCGMGIVVT 870
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 181/428 (42%), Gaps = 98/428 (22%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAIAMSLRDGQRVIYTSPIKALSNQK 118
+P Q+Q T + N + + +V+A T ++PI+AL+ ++
Sbjct: 1326 FNPIQTQVFTALYNSDDNALVAAPTG-----------------------SAPIEALAKER 1362
Query: 119 YREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSM--QYKGSEITREV 166
YR+++++F GL +TG+ T D ++ T E W ++ ++K + ++V
Sbjct: 1363 YRDWEKKFGG-GLKFAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQV 1421
Query: 167 AWIIFDEVHYMRDRERGVVWE------ESIVMSPKNS-RFVFLSATVPNAKEFADWVAKV 219
+ I DE+H + +RG V E + I +N RFV LS +V NAK+ DW+
Sbjct: 1422 SLFIIDELHLIGG-QRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDWIGAT 1480
Query: 220 HQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDRK 279
+ RP PL+ +I + + K + + + +++ A+ +
Sbjct: 1481 SHGLFNFSPV-VRPVPLEIHIQSVD------IANFKARMQAMT-KRTYTAIA------QH 1526
Query: 280 KDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNG 339
NGK P ++F +++ +++ MDL
Sbjct: 1527 AKNGK-----------------------------PALVFVPTRKH-----VRLTTMDLIT 1552
Query: 340 DDEKDNIEKIFWSAMDMLSDDDKKLPQVSN-MLPL-LKRGIGVHHSGLLPILKEVIEILF 397
D+ EK F + + + L ++S+ ML + L+ G+G H GL + +++ LF
Sbjct: 1553 YSSADSGEKSF--LLQSTKELEPFLNKISDEMLKVTLREGVGYLHEGLSSLDHDIVAQLF 1610
Query: 398 QEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW-ITSGEYIQMSGRAGRRGID 456
+ G I+ + + + + A VV +DG+ + + +QM G A R +D
Sbjct: 1611 EAGWIQVCVLSSSMCYIVTLLAHLVVVMGTLYYDGENAQTDYPVTDLLQMMGHASRPLVD 1670
Query: 457 ERGICILM 464
G C+++
Sbjct: 1671 HSGKCVIL 1678
>Medtr7g075463.2 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 940
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 195/458 (42%), Gaps = 108/458 (23%)
Query: 60 LDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIA-------------MSLRDGQRV 105
+ QS+ TC + ++++SA T +GKTV+ I + ++ +
Sbjct: 25 FNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRLLSRSISSEGRFIHVKGSLKT 84
Query: 106 IYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDP--------NASCLVMTT-----EIW 152
IY +P KAL +K R++ ++F G+ ++T D N + +++TT +
Sbjct: 85 IYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIILTTPEKFDAVS 144
Query: 153 R-SMQYKGSEITREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPK-------NSR 198
R ++ G ++A ++ DEVH + D RG E + I +PK R
Sbjct: 145 RYGIESGGLSFFSDIALLLIDEVHLLND-PRGAALEAIVSRIKIISCNPKMKLNPLAQVR 203
Query: 199 FVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIF---PSGGDGLYLVVDEK 255
F+ LSAT+PN ++ A W+ V Q + RP L +F P+ D L
Sbjct: 204 FLALSATIPNIEDLAKWLL-VPDQGIKRFGEEMRPVKLTTKVFGYAPAKNDFL------- 255
Query: 256 GKFREDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYD-- 313
F+K L ++ IF I+ QY
Sbjct: 256 -------FEKRL-----------------------------QNYIFDIL-----MQYSKG 274
Query: 314 -PVILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLP 372
++F +++ + A ++A++ +N I+ D L + L M
Sbjct: 275 KSALIFCSTRKGAQEAAQRLAQIVMNFGQSNPFIKS--REQQDQLREASMSLSD-KQMQS 331
Query: 373 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 432
+ G+G H+ GL + ++E LF +G I+ L T T + G+N+PA TVV + + F+
Sbjct: 332 YILYGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNK 391
Query: 433 DKFRWITSGEY-----IQMSGRAGRRGIDERGICILMV 465
+K ++ EY +QMSGRAGR D+ G+ I+M
Sbjct: 392 EKSLYM---EYDRSTILQMSGRAGRPPFDDTGMVIIMT 426
>Medtr7g075463.4 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 940
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 195/458 (42%), Gaps = 108/458 (23%)
Query: 60 LDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIA-------------MSLRDGQRV 105
+ QS+ TC + ++++SA T +GKTV+ I + ++ +
Sbjct: 25 FNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRLLSRSISSEGRFIHVKGSLKT 84
Query: 106 IYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDP--------NASCLVMTT-----EIW 152
IY +P KAL +K R++ ++F G+ ++T D N + +++TT +
Sbjct: 85 IYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIILTTPEKFDAVS 144
Query: 153 R-SMQYKGSEITREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPK-------NSR 198
R ++ G ++A ++ DEVH + D RG E + I +PK R
Sbjct: 145 RYGIESGGLSFFSDIALLLIDEVHLLND-PRGAALEAIVSRIKIISCNPKMKLNPLAQVR 203
Query: 199 FVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIF---PSGGDGLYLVVDEK 255
F+ LSAT+PN ++ A W+ V Q + RP L +F P+ D L
Sbjct: 204 FLALSATIPNIEDLAKWLL-VPDQGIKRFGEEMRPVKLTTKVFGYAPAKNDFL------- 255
Query: 256 GKFREDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYD-- 313
F+K L ++ IF I+ QY
Sbjct: 256 -------FEKRL-----------------------------QNYIFDIL-----MQYSKG 274
Query: 314 -PVILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLP 372
++F +++ + A ++A++ +N I+ D L + L M
Sbjct: 275 KSALIFCSTRKGAQEAAQRLAQIVMNFGQSNPFIKS--REQQDQLREASMSLSD-KQMQS 331
Query: 373 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 432
+ G+G H+ GL + ++E LF +G I+ L T T + G+N+PA TVV + + F+
Sbjct: 332 YILYGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNK 391
Query: 433 DKFRWITSGEY-----IQMSGRAGRRGIDERGICILMV 465
+K ++ EY +QMSGRAGR D+ G+ I+M
Sbjct: 392 EKSLYM---EYDRSTILQMSGRAGRPPFDDTGMVIIMT 426
>Medtr7g075463.3 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 1050
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 196/455 (43%), Gaps = 102/455 (22%)
Query: 60 LDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIA-------------MSLRDGQRV 105
+ QS+ TC + ++++SA T +GKTV+ I + ++ +
Sbjct: 25 FNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRLLSRSISSEGRFIHVKGSLKT 84
Query: 106 IYTSPIKALSNQKYREFKEEFSDVGL----MTGD----VTIDPNASCLVMTT-----EIW 152
IY +P KAL +K R++ ++F G+ +TGD + N + +++TT +
Sbjct: 85 IYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIILTTPEKFDAVS 144
Query: 153 R-SMQYKGSEITREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPK-------NSR 198
R ++ G ++A ++ DEVH + D RG E + I +PK R
Sbjct: 145 RYGIESGGLSFFSDIALLLIDEVHLLND-PRGAALEAIVSRIKIISCNPKMKLNPLAQVR 203
Query: 199 FVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIF---PSGGDGLYLVVDEK 255
F+ LSAT+PN ++ A W+ V Q + RP L +F P+ D L
Sbjct: 204 FLALSATIPNIEDLAKWLL-VPDQGIKRFGEEMRPVKLTTKVFGYAPAKNDFL------- 255
Query: 256 GKFREDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPV 315
F+K L ++ IF I+ + +
Sbjct: 256 -------FEKRL-----------------------------QNYIFDILMQYSKGK--SA 277
Query: 316 ILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLK 375
++F +++ + A ++A++ +N I+ D L + L M +
Sbjct: 278 LIFCSTRKGAQEAAQRLAQIVMNFGQSNPFIKS--REQQDQLREASMSLSD-KQMQSYIL 334
Query: 376 RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKF 435
G+G H+ GL + ++E LF +G I+ L T T + G+N+PA TVV + + F+ +K
Sbjct: 335 YGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKS 394
Query: 436 RWITSGEY-----IQMSGRAGRRGIDERGICILMV 465
++ EY +QMSGRAGR D+ G+ I+M
Sbjct: 395 LYM---EYDRSTILQMSGRAGRPPFDDTGMVIIMT 426
>Medtr7g075463.1 | ATP-binding; ATP-dependent helicase; DNA helicase
| HC | chr7:28265418-28275446 | 20130731
Length = 1252
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 195/455 (42%), Gaps = 102/455 (22%)
Query: 60 LDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIA-------------MSLRDGQRV 105
+ QS+ TC + ++++SA T +GKTV+ I + ++ +
Sbjct: 25 FNSLQSECFPTCYHSDVNMVISAPTGSGKTVLFELCILRLLSRSISSEGRFIHVKGSLKT 84
Query: 106 IYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIDP--------NASCLVMTT-----EIW 152
IY +P KAL +K R++ ++F G+ ++T D N + +++TT +
Sbjct: 85 IYIAPSKALVQEKVRDWNQKFGPWGICCLELTGDNESYTPRNINEADIILTTPEKFDAVS 144
Query: 153 R-SMQYKGSEITREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPK-------NSR 198
R ++ G ++A ++ DEVH + D RG E + I +PK R
Sbjct: 145 RYGIESGGLSFFSDIALLLIDEVHLLND-PRGAALEAIVSRIKIISCNPKMKLNPLAQVR 203
Query: 199 FVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIF---PSGGDGLYLVVDEK 255
F+ LSAT+PN ++ A W+ V Q + RP L +F P+ D L
Sbjct: 204 FLALSATIPNIEDLAKWLL-VPDQGIKRFGEEMRPVKLTTKVFGYAPAKNDFL------- 255
Query: 256 GKFREDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPV 315
F+K L ++ IF I ++ +
Sbjct: 256 -------FEKRL-----------------------------QNYIFDI--LMQYSKGKSA 277
Query: 316 ILFSFSKRECEFLAMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLK 375
++F +++ + A ++A++ +N I+ D L + L M +
Sbjct: 278 LIFCSTRKGAQEAAQRLAQIVMNFGQSNPFIKS--REQQDQLREASMSLSD-KQMQSYIL 334
Query: 376 RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKF 435
G+G H+ GL + ++E LF +G I+ L T T + G+N+PA TVV + + F+ +K
Sbjct: 335 YGVGYHNGGLCHKDRSIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKS 394
Query: 436 RWITSGEY-----IQMSGRAGRRGIDERGICILMV 465
++ EY +QMSGRAGR D+ G+ I+M
Sbjct: 395 LYM---EYDRSTILQMSGRAGRPPFDDTGMVIIMT 426
>Medtr4g008780.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | HC | chr4:1682714-1679988 | 20130731
Length = 890
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 195/432 (45%), Gaps = 79/432 (18%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAIAMSLRDGQ----RVIYTSPIKAL 114
+P Q+Q T + N + + +V+A T +GKT+ A +AI + + G RV+Y +PI+AL
Sbjct: 88 FNPIQTQVFTALYNSDDNALVAAPTGSGKTICAEFAILRNHQKGSDSVMRVVYVAPIEAL 147
Query: 115 SNQKYREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSM--QYKGSEI 162
+ ++YR+++++F GL +TG+ T D ++ T E W ++ ++K +
Sbjct: 148 AKERYRDWEKKFGG-GLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKH 206
Query: 163 TREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPKNS-RFVFLSATVPNAKEFADW 215
++V+ I DE+H + +RG V E + I +N RFV LS +V NAK+ DW
Sbjct: 207 VQQVSLFIIDELHLI-GGQRGSVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDW 265
Query: 216 VAKVHQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSE 275
+ + RP PL+ +I + + K + + + +++ A+
Sbjct: 266 IGATSHGLFNFSPV-VRPVPLEIHIQSVD------IANFKARMQAMT-KRTYTAIA---- 313
Query: 276 GDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKM 335
+ NGK P ++F +++ +++ M
Sbjct: 314 --QHAKNGK-----------------------------PALVFVPTRKH-----VRLTTM 337
Query: 336 DLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSN-MLPL-LKRGIGVHHSGLLPILKEVI 393
DL D+ EK F + + + L ++S+ ML + L+ G+G H GL + ++
Sbjct: 338 DLITYSSADSGEKSF--LLQSTKELEPFLNKISDEMLKVTLREGVGYLHEGLSSLDHDIE 395
Query: 394 EILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRW-ITSGEYIQMSGRAGR 452
LF+ G I+ + + + A VV + +DG+ + + +QM G A R
Sbjct: 396 AQLFEAGWIQDCVLSSSMCYKDTLLAHLVVVMGTQYYDGENAQTDYPVTDLLQMMGHASR 455
Query: 453 RGIDERGICILM 464
+D G C+++
Sbjct: 456 PLVDHSGKCVIL 467
>Medtr2g064740.1 | U5 small nuclear ribonucleoprotein 200 kDa helicase
| HC | chr2:29260637-29270804 | 20130731
Length = 2188
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 197/443 (44%), Gaps = 100/443 (22%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAIAMSLRDGQ-------RVIYTSPI 111
+P Q+Q T + N + +V+V+A T +GKT+ A +AI LR+ Q RV+Y +P+
Sbjct: 1371 FNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAI---LRNHQKLPDSVMRVVYIAPV 1427
Query: 112 KALSNQKYREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSM--QYKG 159
+AL+ ++YR+++++F GL +TG+ D ++ T E W ++ ++K
Sbjct: 1428 EALAKERYRDWEKKFGG-GLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALSRRWKQ 1486
Query: 160 SEITREVAWIIFDEVHYMRDRERGVVWEESIVMSPK--------NSRFVFLSATVPNAKE 211
+ ++V+ I DE+H + + V+ E IV + R V LS ++ NAK+
Sbjct: 1487 RKHVQQVSLFIIDELHLIGGQGGPVL--EVIVSRMRYISSQLENKIRIVALSTSLANAKD 1544
Query: 212 FADWVAKVHQQPCHIVYT---DYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLN 268
+W+ H ++ RP PL+ +I G+ + +F+ +
Sbjct: 1545 LGEWIGAT----SHGLFNFPPGVRPVPLEIHI-----QGVDIA----------NFEARMQ 1585
Query: 269 ALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILFSFSKRECEFL 328
A+ P+ + + + + P I+F +++
Sbjct: 1586 AMTKPT----------------YTSIAQHA-----------KNKKPAIVFVPTRKHVRLT 1618
Query: 329 AMQMAKMDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSN-MLPL-LKRGIGVHHSGLL 386
A +DL D+ EK F + L + + + ++S+ ML + L+ G+G H GL
Sbjct: 1619 A-----VDLITYSGADSGEKPF--LLRSLEELEPFINKISDEMLKVTLREGVGYLHEGLN 1671
Query: 387 PILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEY--- 443
+ +++ LF+ G I+ + + G+ + A VV + +DG R +Y
Sbjct: 1672 SLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDG---RENAQTDYPVT 1728
Query: 444 --IQMSGRAGRRGIDERGICILM 464
+QM G A R +D G C+++
Sbjct: 1729 DLLQMMGHASRPLVDNSGKCVIL 1751
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 189/461 (40%), Gaps = 104/461 (22%)
Query: 50 TEPAKKFPFTLDPFQSQAI-TCIENGESVMVSAHTSAGKTVVALYAIAMSLR------DG 102
+PA K L+ QS+ T + +++++ A T AGKT VA+ I + DG
Sbjct: 514 AQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNTDDG 573
Query: 103 Q------RVIYTSPIKALSNQKYREFKEEFSDVGL----MTGDVTID----PNASCLVMT 148
+++Y +P+KAL + D + ++GD ++ +V T
Sbjct: 574 SIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYNVTVRELSGDQSLTRQQIEETQIIVTT 633
Query: 149 TEIWRSMQYKGSE--ITREVAWIIFDEVHYMRDRERGVVWEE-------SIVMSPKNSRF 199
E W + K + T+ V +I DE+H + D RG V E I S R
Sbjct: 634 PEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHD-NRGPVLESIVARTVRQIETSKDYIRL 692
Query: 200 VFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVD-EKGKF 258
V LSAT+PN ++ A L+L VD KG F
Sbjct: 693 VGLSATLPNYEDVA----------------------------------LFLRVDLNKGLF 718
Query: 259 REDSFQKSLNALVPPSEGDRKKDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQY------ 312
D+ + VP S+ + G+ + K + F+++ I R+
Sbjct: 719 YFDNSYRP----VPLSQQ---------YIGITIKKPLQR---FQLMNDICYRKVLDVAGK 762
Query: 313 DPVILFSFSKRECEFLAMQMAKMDLNGDD------EKDNIEKIFWSAMDMLSDDDKKLPQ 366
V++F S++E A + L D E +I + D++ D K
Sbjct: 763 HQVLIFVHSRKETAKTARAIRDAALADDTLGRFLKEDSASREILHTHTDLVKSSDLK--- 819
Query: 367 VSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTN 426
LL G +HH+G+ ++++E LF +G + L +T T + G+N+PA TV+
Sbjct: 820 -----DLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKG 874
Query: 427 VRKFDGDKFRW--ITSGEYIQMSGRAGRRGIDERGICILMV 465
+ ++ +K W ++ + +QM GRAGR D G I++
Sbjct: 875 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILT 915
>Medtr4g008770.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase, putative | LC | chr4:1676751-1672827 |
20130731
Length = 666
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 28/194 (14%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAIAMSLRDGQ----RVIYTSPIKAL 114
+P Q+Q T + N + + +V+A T +GKT+ A +AI + + G RV+Y +PI+AL
Sbjct: 460 FNPIQTQVFTALYNSDDNALVAAPTGSGKTICAEFAILRNHKKGSDSVMRVVYEAPIEAL 519
Query: 115 SNQKYREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSM--QYKGSEI 162
+ ++YR+++++F GL +TG+ T D ++ T E W ++ ++K +
Sbjct: 520 AKERYRDWEKKFGG-GLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKH 578
Query: 163 TREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPKNS-RFVFLSATVPNAKEFADW 215
++V+ I DE+H + +RG V E + I +N RFV LS +V NAK+ DW
Sbjct: 579 VQQVSLFIIDELHLI-GGQRGTVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDW 637
Query: 216 VAKVHQQPCHIVYT 229
+ V +Q C + T
Sbjct: 638 I--VLEQNCLAIIT 649
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 28/194 (14%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAIAMSLRDGQ----RVIYTSPIKAL 114
+P Q+Q T + N + + +V+A T +GKT+ A +AI + + G RV+Y +PI+AL
Sbjct: 148 FNPIQTQVFTALYNSDDNALVAAPTGSGKTICAEFAILRNHKKGSDSVMRVVYEAPIEAL 207
Query: 115 SNQKYREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSM--QYKGSEI 162
+ ++YR+++++F GL +TG+ T D ++ T E W ++ ++K +
Sbjct: 208 AKERYRDWEKKFGG-GLKLAVVELTGETTTDLKLLEKGQIIISTPEKWDALSRRWKQRKH 266
Query: 163 TREVAWIIFDEVHYMRDRERGVVWE------ESIVMSPKNS-RFVFLSATVPNAKEFADW 215
++V+ I DE+H + +RG V E + I +N RFV LS +V NAK+ DW
Sbjct: 267 VQQVSLFIIDELHLI-GGQRGPVLEVIVSRMKYIANQVENKIRFVALSTSVANAKDLGDW 325
Query: 216 VAKVHQQPCHIVYT 229
+ V +Q C + T
Sbjct: 326 I--VLEQNCLAIIT 337
>Medtr2g030905.1 | U5 small nuclear ribonucleoprotein 200 kDa
helicase | LC | chr2:11697696-11700581 | 20130731
Length = 961
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 186/430 (43%), Gaps = 76/430 (17%)
Query: 60 LDPFQSQAITCI-ENGESVMVSAHTSAGKTVVALYAIAMSLRDGQ-RVIYTSPIKALSNQ 117
+ Q+ A + ++ ++V ++A T +GKT A AI + + G RV+Y +PI+A++
Sbjct: 154 FNKIQTHAFQVLYKSDDNVFLAAPTGSGKTTCAEIAILRNHQKGHMRVVYIAPIRAIAQN 213
Query: 118 KYREFKEEF-----SDVGLMTG----DVTIDPNASCLVMTTEIWRSM--QYKGSEITREV 166
+YRE+K +F S + +TG D+ + ++ T +IW ++ Q+K ++V
Sbjct: 214 QYREWKTKFGGGLNSMIVELTGENETDLKLLEEGQIIITTPQIWDALSRQWKQIIQIQQV 273
Query: 167 AWIIFDEVHYMRDRERGVVWEESIVMSP-------KNSRFVFLSATVPNAKEFADWVAKV 219
+I D++H++ E G + E IV K R V LSA + N K+ +W+
Sbjct: 274 PLLILDDLHFIGGPE-GHILERIIVRMKQISTRVGKKMRIVALSAPITNGKDIGEWIGAT 332
Query: 220 HQQPCHIVYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKSLNALVPPSEGDRK 279
+ T R PL+ +I K E S +S N LV R
Sbjct: 333 SHSLFNFSPTA-RHVPLELFI----------------KVVEFSDLRSANPLV------RL 369
Query: 280 KDNGKFHKGLMLGKVGEESDIFKIVKMIIQRQYDPVILF-----SFSKRECEFLAMQMAK 334
K+ K + ++ P++++ + S+ +++ AK
Sbjct: 370 KEMAKITHSFITEHA---------------KKGKPILVYVPTWENVSRTVFNMISVSQAK 414
Query: 335 MDLNGDDEKDNIEKIFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIE 394
+ + ++ + F +++ +S+ + K L G+G H GL +E +
Sbjct: 415 SWVQLNSQQ---HQAFEASICKISNLELK--------SALALGVGFLHEGLNTNDQEFVI 463
Query: 395 ILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRG 454
F+ GLIK + + +++ A VV +D D + + + + M G+AGRR
Sbjct: 464 RSFEAGLIKICIISSSMCWEVSLSAHIVVLMGTEYYDFDGPSYPIT-DILHMMGQAGRRL 522
Query: 455 IDERGICILM 464
ID G +++
Sbjct: 523 IDSVGKALIL 532
>Medtr2g064390.1 | U5 small nuclear ribonucleoprotein helicase | LC
| chr2:29190848-29183241 | 20130731
Length = 1579
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 32/188 (17%)
Query: 60 LDPFQSQAITCIENGE-SVMVSAHTSAGKTVVALYAI----AMSLRDGQRVIYTSPIKAL 114
+P Q+Q T + N + +V+V+ T +GKT+ A +AI ++ + V+Y +P + L
Sbjct: 761 FNPVQTQVFTVLYNSDDNVLVATPTGSGKTICAEFAILRNHQINTNNDMLVVYLTPNETL 820
Query: 115 SNQKYREFKEEFSDVGL------MTGDVTID----PNASCLVMTTEIWRSMQY--KGSEI 162
+ Q+Y ++ ++F + GL ++GD ID +V T E W ++ K +
Sbjct: 821 AKQQYLDWDKKFGN-GLKLKVVELSGDPQIDLELLREGQIIVSTPERWDALNRSRKAMNV 879
Query: 163 TREVAWIIFDEVHYMRDRERGVVWEESI-------------VMSPKNSRFVFLSATVPNA 209
V+ I D++H + + + G V E ++ + S R V LS +V NA
Sbjct: 880 AMSVSLFIIDQLHLIGE-QGGHVIEGTVSRMKSHDIGINYFIKSYSKVRLVGLSTSVSNA 938
Query: 210 KEFADWVA 217
K+ +W+
Sbjct: 939 KDLGEWIG 946
>Medtr1g007510.1 | DNA polymerase theta-like protein | HC |
chr1:413021-417854 | 20130731
Length = 912
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 21/171 (12%)
Query: 287 KGLMLGKVGEESD-IFKIVKMIIQRQYDPVILFSFSKRECEFLAMQMAKM--DLNGDDEK 343
KG LG G++ D + ++ ++Q + V++F S++ CE +AK D +
Sbjct: 9 KGADLG--GKDPDHVVELCNEVVQ-EGQSVLIFCSSRKGCESTGRHVAKFLKSFTVDINE 65
Query: 344 DNIE-KIFWSAMDMLSDDDKKLPQVSNMLPLLKR----GIGVHHSGLLPILKEVIEILFQ 398
+N E SA++ L +K P + + P+L+ G+ HH+GL +E++E ++
Sbjct: 66 NNCEFADITSAINSL----RKCP--AGLDPVLEETFPAGVAFHHAGLTVEEREIVETCYR 119
Query: 399 EGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGR 449
+ L++ L AT T + G+N PA+ V+F R G F I Y+QM+GR
Sbjct: 120 KDLLRVLTATSTLAAGVNPPARRVIFRQPRI--GCDF--IDGTRYMQMAGR 166