Miyakogusa Predicted Gene

Lj1g3v3329200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3329200.1 Non Characterized Hit- tr|C4IZU3|C4IZU3_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,70.15,4e-19,CGI-141-RELATED/LIPASE CONTAINING PROTEIN,NULL;
seg,NULL; Got1,Vesicle transport protein, Got1/SFT2-,CUFF.30384.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g006340.1 | Got1/SFT2-like vescicle transporter family pro...   185   8e-48
Medtr5g089500.1 | Got1/SFT2-like vescicle transporter family pro...    93   6e-20
Medtr0180s0070.1 | Got1/SFT2-like vescicle transporter family pr...    91   2e-19

>Medtr7g006340.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr7:658220-653857 | 20130731
          Length = 126

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 95/125 (76%), Positives = 102/125 (81%)

Query: 1   MAFDIDEIKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIFWLAGVAILLGWRSMWGIF 60
           MA+DIDE+KK                     DRGLLALGNIFWLAGVAILLGWRSMW +F
Sbjct: 1   MAYDIDEMKKIGIGLIGFGIFFTFLGIILFFDRGLLALGNIFWLAGVAILLGWRSMWSLF 60

Query: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120
           T+RANYKG+ASFLLGLFFIFVRWPIVGIILEIYGCVFLFS FWSS+KVFLYHIPVVGW+I
Sbjct: 61  TSRANYKGTASFLLGLFFIFVRWPIVGIILEIYGCVFLFSGFWSSVKVFLYHIPVVGWVI 120

Query: 121 RFIAP 125
           RFIAP
Sbjct: 121 RFIAP 125


>Medtr5g089500.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr5:38892943-38897342 | 20130731
          Length = 140

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 66/90 (73%)

Query: 32  DRGLLALGNIFWLAGVAILLGWRSMWGIFTNRANYKGSASFLLGLFFIFVRWPIVGIILE 91
           D+GLLA+GN+ +++GV++ +G +S    F  R+N+KG+ SF +G   + + WPI+G+I+E
Sbjct: 33  DKGLLAMGNVLFVSGVSLTIGLKSTMQFFMKRSNFKGTISFGIGFLILILGWPILGMIIE 92

Query: 92  IYGCVFLFSDFWSSIKVFLYHIPVVGWIIR 121
            YG + LFS FW ++ VFL  IPV+GW+I+
Sbjct: 93  AYGFIVLFSGFWPTLAVFLQKIPVLGWVIQ 122


>Medtr0180s0070.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | scaffold0180:22369-20759 | 20130731
          Length = 135

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 65/90 (72%)

Query: 32  DRGLLALGNIFWLAGVAILLGWRSMWGIFTNRANYKGSASFLLGLFFIFVRWPIVGIILE 91
           D+GLLA+GNI +++GV++ +G +S    F  R+N+KG+ SF +G   + + WPI+G+I+E
Sbjct: 28  DKGLLAMGNILFVSGVSLTIGLKSTMQFFMKRSNFKGTVSFGIGFLILILGWPILGMIVE 87

Query: 92  IYGCVFLFSDFWSSIKVFLYHIPVVGWIIR 121
            YG + LFS FW ++ VFL  IPV+GW ++
Sbjct: 88  SYGFLVLFSGFWPTLSVFLQKIPVLGWFVQ 117