Miyakogusa Predicted Gene

Lj1g3v3328680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328680.1 tr|F2EA50|F2EA50_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,46.91,3e-19,coiled-coil,NULL,CUFF.30418.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g407030.2 | plant/K21P3-8 protein, putative | HC | chr7:10...   224   4e-59
Medtr7g407030.1 | plant/K21P3-8 protein, putative | HC | chr7:10...   224   4e-59
Medtr1g025570.1 | plant/K21P3-8 protein, putative | HC | chr1:81...   213   7e-56

>Medtr7g407030.2 | plant/K21P3-8 protein, putative | HC |
           chr7:1053494-1057006 | 20130731
          Length = 179

 Score =  224 bits (571), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/179 (73%), Positives = 158/179 (88%)

Query: 4   FFRSSLRSFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAKQ 63
            +RS +RSFAT A ++HHNNH +NHKFL P SF+GSW+AP+DPKEAEA+LAQLRR+YAKQ
Sbjct: 1   MWRSQVRSFATRAANSHHNNHHENHKFLSPHSFVGSWKAPRDPKEAEAQLAQLRREYAKQ 60

Query: 64  VKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQFR 123
           VKE+RKEYI E+E MRLEKQRKDEAR+EALRVA EERK+LKAQE E+RAQ+RNI QQQFR
Sbjct: 61  VKEVRKEYIVEVEAMRLEKQRKDEARKEALRVANEERKKLKAQEKELRAQERNIAQQQFR 120

Query: 124 ETLLKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVIATTHF 182
           ETLLKERAEKL+ WR + K HEEKKAEK +LL ++SS+WVDEAE+EK+I + VIATT+ 
Sbjct: 121 ETLLKERAEKLQSWRMQAKKHEEKKAEKKDLLHKRSSLWVDEAELEKEITNVVIATTYL 179


>Medtr7g407030.1 | plant/K21P3-8 protein, putative | HC |
           chr7:1053497-1057006 | 20130731
          Length = 179

 Score =  224 bits (571), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/179 (73%), Positives = 158/179 (88%)

Query: 4   FFRSSLRSFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAKQ 63
            +RS +RSFAT A ++HHNNH +NHKFL P SF+GSW+AP+DPKEAEA+LAQLRR+YAKQ
Sbjct: 1   MWRSQVRSFATRAANSHHNNHHENHKFLSPHSFVGSWKAPRDPKEAEAQLAQLRREYAKQ 60

Query: 64  VKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQFR 123
           VKE+RKEYI E+E MRLEKQRKDEAR+EALRVA EERK+LKAQE E+RAQ+RNI QQQFR
Sbjct: 61  VKEVRKEYIVEVEAMRLEKQRKDEARKEALRVANEERKKLKAQEKELRAQERNIAQQQFR 120

Query: 124 ETLLKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVIATTHF 182
           ETLLKERAEKL+ WR + K HEEKKAEK +LL ++SS+WVDEAE+EK+I + VIATT+ 
Sbjct: 121 ETLLKERAEKLQSWRMQAKKHEEKKAEKKDLLHKRSSLWVDEAELEKEITNVVIATTYL 179


>Medtr1g025570.1 | plant/K21P3-8 protein, putative | HC |
           chr1:8187285-8186269 | 20130731
          Length = 174

 Score =  213 bits (542), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 120/179 (67%), Positives = 146/179 (81%), Gaps = 6/179 (3%)

Query: 4   FFRSSLRSFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAKQ 63
            F++  RSFAT A  +HH    +NH FL PTSF+GSW+APKDPKE    LAQLRRDYAKQ
Sbjct: 2   MFKTFSRSFATRASQSHHC---ENHNFLSPTSFVGSWQAPKDPKEM---LAQLRRDYAKQ 55

Query: 64  VKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQFR 123
           VKE+RKEYI EME M LEKQRKD+A+RE++RVA EERK+LKAQ A++RAQ+RNI +QQF+
Sbjct: 56  VKEVRKEYIREMEAMALEKQRKDDAQRESIRVANEERKKLKAQAAQLRAQERNIARQQFQ 115

Query: 124 ETLLKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVIATTHF 182
           + LLKER EKLE WR + K HEEKKAEK ELL ++SS+WVDEAE+EK+I + VIATT+ 
Sbjct: 116 QFLLKERVEKLEIWRMQAKKHEEKKAEKKELLHKRSSLWVDEAELEKEITNVVIATTYL 174