Miyakogusa Predicted Gene

Lj1g3v3328600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328600.1 Non Characterized Hit- tr|D7KMP0|D7KMP0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,69.35,0.000000000000001,coiled-coil,NULL,CUFF.30348.1
         (350 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g063730.1 | myosin heavy chain-like protein | HC | chr5:26...   472   e-133

>Medtr5g063730.1 | myosin heavy chain-like protein | HC |
           chr5:26431551-26422943 | 20130731
          Length = 903

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/344 (72%), Positives = 286/344 (83%)

Query: 2   HHLTSLETLEKEKSDLQLCNVQLTKKLDMSLQEIKNLERAHQVLTEHLLNLDKESLNLWS 61
           HH+ S + L+KEKSDLQLCN  L +KL  SLQ+I NLE + Q +  HLLNLDKESLNL +
Sbjct: 294 HHINSEQKLDKEKSDLQLCNADLAEKLGTSLQKINNLEGSLQEMAAHLLNLDKESLNLVN 353

Query: 62  KFDEMNSLYASCFELVQRERETFSKHAQNQYGELNHRFLSLSSEKDEIQMINHELRNSVN 121
           KFDEMNSLY SCF LVQ ER+TFSKHAQNQY  L+ +FL LSSEKDEI M N ELR+S+N
Sbjct: 354 KFDEMNSLYTSCFNLVQHERDTFSKHAQNQYDVLHTKFLVLSSEKDEIHMTNQELRSSLN 413

Query: 122 ELQKVHNSTVVQHKEDCRLAAERIQHLESEAETLISKKAEADVIISKLEGKADTLLENSR 181
           +L+KV  +TV Q+ EDCRLAAERIQ LESEAE LISKKAE +V ISKLE KA+ LL +  
Sbjct: 414 DLRKVQEATVAQYTEDCRLAAERIQRLESEAEALISKKAETEVTISKLEEKAEILLGSVT 473

Query: 182 SSENQMQGLLLKVSALENESKENMERLEAEILKKSEEIDTLQKEIIKLEQHADSVDKEVT 241
           SSENQMQGLLLK+SALE ESKENMER++A+ILKKSEEIDTLQKE +K+EQ+ADS DKEV 
Sbjct: 474 SSENQMQGLLLKISALETESKENMERMQADILKKSEEIDTLQKERMKIEQNADSFDKEVL 533

Query: 242 QLHNTLEEKEQCILQNMQQEKKLGDQLIENQSLLTAVESKLSEARKQYDQMVENKQLELS 301
           QL N LEEKEQCILQ+ ++EKKL DQ+ EN+SLLTA ESKL+EAR QYDQMVENKQLELS
Sbjct: 534 QLRNILEEKEQCILQHTEEEKKLEDQITENRSLLTAAESKLAEARNQYDQMVENKQLELS 593

Query: 302 KHLKEISQRNDQAINDIRRKYELEKMEIANMEKDKVLYDMSVFE 345
           KHLKEISQRNDQAINDI+RKYELEKMEI  +E DK    ++  E
Sbjct: 594 KHLKEISQRNDQAINDIKRKYELEKMEIVKLETDKADKAIAAIE 637