Miyakogusa Predicted Gene

Lj1g3v3315200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3315200.1 Non Characterized Hit- tr|E1Z1Y3|E1Z1Y3_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.95,1e-18,DUF4281,Protein of unknown function DUF4281;
seg,NULL,CUFF.30311.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g007280.1 | neoxanthin synthase | HC | chr7:1411817-141508...   338   4e-93
Medtr6g025680.1 | neoxanthin synthase | HC | chr6:8784317-878095...   285   4e-77
Medtr6g018550.1 | neoxanthin synthase | HC | chr6:7110173-711341...   282   2e-76

>Medtr7g007280.1 | neoxanthin synthase | HC | chr7:1411817-1415080 |
           20130731
          Length = 239

 Score =  338 bits (866), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 173/242 (71%), Positives = 198/242 (81%), Gaps = 5/242 (2%)

Query: 1   MSFSTCFSLSPLAF-KDINLRGTIGK-GLNFPFPIRSNGAEICNQRIARSRVNLSGDWSF 58
           MSFS+C+S SPL F KDI L  T+G+  LNFPF I SNG     + I+RSR +LSGDWSF
Sbjct: 1   MSFSSCYSHSPLPFNKDIKLCRTVGQVKLNFPFSITSNGV---TEHISRSRFSLSGDWSF 57

Query: 59  IGGSRIVMKPNASRWVHYPRSSPIHASCFVGPQLASTVFTWGTVAVLPFYTLMVLAPKSE 118
           IGGSRI +KP A+R V +P+ S IHAS F+G QLASTVFTWGTVAVLPFYTLMVLAPKSE
Sbjct: 58  IGGSRIAVKPKATRSVRHPKRSQIHASWFMGSQLASTVFTWGTVAVLPFYTLMVLAPKSE 117

Query: 119 LTKKSVESTXXXXXXXXXXXXXXXXSWTPETIRLIFASKHLLPELTSIAKMFSNELTLAS 178
           LT+KS+ES+                SWTPET+RLIFASK+LLPEL+SI KMFS+ELTLAS
Sbjct: 118 LTRKSMESSLPYVVLGVLYAYLLCLSWTPETVRLIFASKYLLPELSSIGKMFSSELTLAS 177

Query: 179 AWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIGILTHVITRALIKTTRKEGH 238
           AWIHLLVVDLFAARHIF+DGL+NQ+ETRHSVSFCLFFCPIGILTHVIT+A+ KTTRK+GH
Sbjct: 178 AWIHLLVVDLFAARHIFRDGLKNQIETRHSVSFCLFFCPIGILTHVITKAMTKTTRKDGH 237

Query: 239 VL 240
            L
Sbjct: 238 GL 239


>Medtr6g025680.1 | neoxanthin synthase | HC | chr6:8784317-8780952 |
           20130731
          Length = 240

 Score =  285 bits (728), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 145/243 (59%), Positives = 176/243 (72%), Gaps = 6/243 (2%)

Query: 1   MSFSTCFSLSPLAFKDINLRGTIGKGLNFPFPIRSNGA--EICNQRIARSRVNLSGDWSF 58
           M+FSTCF  S +    +    T  K   + FPIR NGA  E+CN+ I +SR+ L  DWSF
Sbjct: 1   MAFSTCFCNSKIDHLGMT---TNLKEQKYSFPIRINGAKLELCNKLIVKSRIKLIRDWSF 57

Query: 59  IGGSRIVMKPNASRWVHYPR-SSPIHASCFVGPQLASTVFTWGTVAVLPFYTLMVLAPKS 117
           IGGSRIV+K    R V  P+ +SP++AS   G QLAS+ FT GT AVLPFYTLMVLAP S
Sbjct: 58  IGGSRIVVKQKVMRLVASPKKASPVNASLLSGSQLASSAFTIGTAAVLPFYTLMVLAPNS 117

Query: 118 ELTKKSVESTXXXXXXXXXXXXXXXXSWTPETIRLIFASKHLLPELTSIAKMFSNELTLA 177
           ELTKKS++S                 SWTPET+ L+FASK+LLPELTSI KMFS+E+TLA
Sbjct: 118 ELTKKSMQSNVPYVILGILYAYLLYLSWTPETVELLFASKYLLPELTSIGKMFSSEMTLA 177

Query: 178 SAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIGILTHVITRALIKTTRKEG 237
           SAWIHLLV+DLFAAR +FQDG +NQ+ETRHSVS CLFFCPIGIL+HV+T+A+ KTT++  
Sbjct: 178 SAWIHLLVIDLFAARQVFQDGQENQIETRHSVSLCLFFCPIGILSHVVTKAMTKTTKENK 237

Query: 238 HVL 240
           H L
Sbjct: 238 HGL 240


>Medtr6g018550.1 | neoxanthin synthase | HC | chr6:7110173-7113413 |
           20130731
          Length = 236

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 144/244 (59%), Positives = 175/244 (71%), Gaps = 12/244 (4%)

Query: 1   MSFSTCFSLSPLAFKDINLRGTIGK-GLNFPFPIRSNGA--EICNQRIARSRVNLSGDWS 57
           M+FSTCF  S +          +GK G  +  PIRSN A  E+C + I +SR+NL  DWS
Sbjct: 1   MAFSTCFCHSKI--------DNLGKTGQKYYLPIRSNDAKFELCKKLIVKSRINLIRDWS 52

Query: 58  FIGGSRIVMKPNASRWVHYPR-SSPIHASCFVGPQLASTVFTWGTVAVLPFYTLMVLAPK 116
           FIGGSRIV+K    R V  P+ +SP++AS   G QLAS+ FT GT AVLPFYTLM LAP 
Sbjct: 53  FIGGSRIVVKQKIMRLVASPKKASPVNASLLSGSQLASSAFTIGTAAVLPFYTLMALAPN 112

Query: 117 SELTKKSVESTXXXXXXXXXXXXXXXXSWTPETIRLIFASKHLLPELTSIAKMFSNELTL 176
           SELTKKS++S                 SWTPET+ L+FASK+LLPELTSI KMFS+E+TL
Sbjct: 113 SELTKKSMQSNVPYVILGILYAYLLYLSWTPETVELLFASKYLLPELTSIGKMFSSEMTL 172

Query: 177 ASAWIHLLVVDLFAARHIFQDGLQNQVETRHSVSFCLFFCPIGILTHVITRALIKTTRKE 236
           ASAWIHLLV+DLFAAR +FQDG +NQ+ETRHSVS CLFFCPIGIL+HV+T+A+ KTT++ 
Sbjct: 173 ASAWIHLLVIDLFAARQVFQDGQENQIETRHSVSLCLFFCPIGILSHVVTKAMTKTTKEN 232

Query: 237 GHVL 240
            H L
Sbjct: 233 KHGL 236