Miyakogusa Predicted Gene

Lj1g3v3313160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3313160.1 Non Characterized Hit- tr|I3SXB6|I3SXB6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.95,0,RIBOSOMAL_S7E,Ribosomal protein S7e; SUBFAMILY NOT
NAMED,NULL; 40S RIBOSOMAL PROTEIN S7,Ribosomal pr,CUFF.30318.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g085000.1 | 40S ribosomal S7-like protein | HC | chr6:3201...   342   1e-94
Medtr6g021670.3 | 40S ribosomal S7-like protein | HC | chr6:7446...   342   2e-94
Medtr6g021670.2 | 40S ribosomal S7-like protein | HC | chr6:7446...   342   2e-94
Medtr6g021670.1 | 40S ribosomal S7-like protein | HC | chr6:7447...   342   2e-94
Medtr8g087480.1 | hypothetical protein | LC | chr8:36156213-3615...    56   2e-08

>Medtr6g085000.1 | 40S ribosomal S7-like protein | HC |
           chr6:32013620-32016969 | 20130731
          Length = 191

 Score =  342 bits (877), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 164/191 (85%), Positives = 178/191 (93%)

Query: 1   MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
           MFTSRKKISKD  AEPTEFEE+V Q LFDLENTNHE+KS+LKDLYIN A+QVDV+GNRKA
Sbjct: 1   MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKA 60

Query: 61  VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
           VVI+VPYRLRK FRKIH RLVRELEKKFSGKDV+ IATRRIVRPPKKG+A QRPR+RTLT
Sbjct: 61  VVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
           AVH+AMLEDVV P+EIVGKR RYR+DGSKIMKVFLDPKERNN EYKLETFS VYRKL+GK
Sbjct: 121 AVHEAMLEDVVLPAEIVGKRTRYRIDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGK 180

Query: 181 DVVFEYPITEA 191
           DVVFEYP+TEA
Sbjct: 181 DVVFEYPVTEA 191


>Medtr6g021670.3 | 40S ribosomal S7-like protein | HC |
           chr6:7446706-7444295 | 20130731
          Length = 191

 Score =  342 bits (876), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 164/191 (85%), Positives = 178/191 (93%)

Query: 1   MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
           MFTSRKKISKD  AEPTEFEE+V Q LFDLENTNHE+KS+LKDLYIN A+QVDV+GNRKA
Sbjct: 1   MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKA 60

Query: 61  VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
           VVI+VPYRLRK FRKIH RLVRELEKKFSGKDV+ IATRRIVRPPKKG+A QRPR+RTLT
Sbjct: 61  VVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
           AVH+AMLEDVV P+EIVGKR RYR+DGSKIMKVFLDPKERNN EYKLETFS VYRKL+GK
Sbjct: 121 AVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGK 180

Query: 181 DVVFEYPITEA 191
           DVVFEYP+TEA
Sbjct: 181 DVVFEYPVTEA 191


>Medtr6g021670.2 | 40S ribosomal S7-like protein | HC |
           chr6:7446857-7444335 | 20130731
          Length = 191

 Score =  342 bits (876), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 164/191 (85%), Positives = 178/191 (93%)

Query: 1   MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
           MFTSRKKISKD  AEPTEFEE+V Q LFDLENTNHE+KS+LKDLYIN A+QVDV+GNRKA
Sbjct: 1   MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKA 60

Query: 61  VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
           VVI+VPYRLRK FRKIH RLVRELEKKFSGKDV+ IATRRIVRPPKKG+A QRPR+RTLT
Sbjct: 61  VVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
           AVH+AMLEDVV P+EIVGKR RYR+DGSKIMKVFLDPKERNN EYKLETFS VYRKL+GK
Sbjct: 121 AVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGK 180

Query: 181 DVVFEYPITEA 191
           DVVFEYP+TEA
Sbjct: 181 DVVFEYPVTEA 191


>Medtr6g021670.1 | 40S ribosomal S7-like protein | HC |
           chr6:7447392-7444292 | 20130731
          Length = 191

 Score =  342 bits (876), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 164/191 (85%), Positives = 178/191 (93%)

Query: 1   MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
           MFTSRKKISKD  AEPTEFEE+V Q LFDLENTNHE+KS+LKDLYIN A+QVDV+GNRKA
Sbjct: 1   MFTSRKKISKDKGAEPTEFEESVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKA 60

Query: 61  VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
           VVI+VPYRLRK FRKIH RLVRELEKKFSGKDV+ IATRRIVRPPKKG+A QRPR+RTLT
Sbjct: 61  VVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLT 120

Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
           AVH+AMLEDVV P+EIVGKR RYR+DGSKIMKVFLDPKERNN EYKLETFS VYRKL+GK
Sbjct: 121 AVHEAMLEDVVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGK 180

Query: 181 DVVFEYPITEA 191
           DVVFEYP+TEA
Sbjct: 181 DVVFEYPVTEA 191


>Medtr8g087480.1 | hypothetical protein | LC |
           chr8:36156213-36155546 | 20130731
          Length = 109

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 8/44 (18%)

Query: 145 LDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGKDVVFEYPI 188
           +DGSKIMKVF DPK+RNN        + +YRKL+GKDVVF  P+
Sbjct: 51  VDGSKIMKVFFDPKDRNN--------TAIYRKLSGKDVVFSIPL 86