Miyakogusa Predicted Gene
- Lj1g3v3289940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3289940.1 tr|B9NC75|B9NC75_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_747167 PE=4
SV=1,37.87,6e-19,seg,NULL; WAK_assoc,NULL,gene.g34336.t1.1
(186 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g082540.1 | wall-associated receptor kinase galacturonan-b... 148 2e-36
Medtr7g082390.1 | wall-associated receptor kinase galacturonan-b... 146 1e-35
Medtr7g082533.1 | wall-associated receptor kinase carboxy-termin... 79 3e-15
Medtr8g104520.1 | receptor-like kinase | HC | chr8:44032465-4403... 69 3e-12
Medtr7g082537.1 | wall-associated receptor kinase carboxy-termin... 64 1e-10
Medtr6g083000.1 | wall-associated receptor kinase carboxy-termin... 58 5e-09
Medtr6g082940.1 | wall-associated receptor kinase carboxy-termin... 56 2e-08
Medtr6g082920.1 | wall-associated receptor kinase carboxy-termin... 56 2e-08
Medtr6g083020.1 | wall-associated kinase-like protein | HC | chr... 54 7e-08
Medtr7g082470.1 | receptor-like kinase | HC | chr7:31610689-3160... 54 1e-07
Medtr1g115485.1 | receptor-like kinase | LC | chr1:52170285-5217... 54 1e-07
Medtr7g082460.1 | receptor-like kinase | HC | chr7:31606935-3160... 50 1e-06
Medtr6g082820.1 | wall-associated receptor kinase carboxy-termin... 48 4e-06
Medtr6g083010.1 | wall-associated receptor kinase galacturonan-b... 47 8e-06
>Medtr7g082540.1 | wall-associated receptor kinase
galacturonan-binding protein | HC |
chr7:31642161-31641229 | 20130731
Length = 260
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 109/181 (60%), Gaps = 13/181 (7%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
+ +N+V+Y VLEAKPDE +LR+T+ DYLQ LCP+ VNT+LDP LFV Y NLTLFY
Sbjct: 73 ITINEVKYNVLEAKPDEHTLRITKEDYLQGLCPTKLVNTTLDPDLFVYGPDYNNLTLFYG 132
Query: 61 CVVPNAVPFP------CVPNSGSGQHVYAQLG-SFDFTSMFCKQSXXXXXXXXXXDITDV 113
C P ++ FP C N S + VY G + D + C++S + D+
Sbjct: 133 C--PPSITFPLNGRFLCPSNGYSDEFVYTWFGYNLDPQAFSCRESMVVPVLNSLIAVGDL 190
Query: 114 NKTLSAIRNGFVVNWIAGIQECEECRKAGGVCGYD--SIRPTCYCRERDQTCPEELPSSD 171
+ SAI FVV WIAGIQ+CE+C+K+GG CGY+ S + TCYC DQ C E P S
Sbjct: 191 TRIRSAIGGEFVVRWIAGIQDCEKCQKSGGFCGYNWTSRQTTCYC--GDQPCSNEPPQSQ 248
Query: 172 D 172
+
Sbjct: 249 E 249
>Medtr7g082390.1 | wall-associated receptor kinase
galacturonan-binding protein | HC |
chr7:31583593-31582532 | 20130731
Length = 256
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 111/186 (59%), Gaps = 19/186 (10%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
+ +N+V+Y VLEAKPDE +LR+T+ DYLQ LCP+ VNT+LDP LFV Y NLTLFY
Sbjct: 76 ITINEVKYNVLEAKPDEHTLRITKEDYLQGLCPTKLVNTTLDPDLFVYGPDYNNLTLFYG 135
Query: 61 CVVPNAVPFP------CVPNSGSGQHVYAQLG-SFDFTSMFCKQSXXXXXXXXXXDITDV 113
C P ++ FP C N S + VY G + D + C++S + D+
Sbjct: 136 C--PPSITFPLNGRFLCPSNGYSDEFVYTWFGYNLDPQAFSCRESMVVPVLNSLIAVGDL 193
Query: 114 NKTLSAIRNGFVVNWIAGIQECEECRKAGGVCGYD--SIRPTCYCRERDQTCPEELPSSD 171
+ SAI FVV WIAGIQ+CE+C+K+GG CGY+ S + TCYC ++ P S+
Sbjct: 194 TRIRSAIGGEFVVRWIAGIQDCEKCQKSGGFCGYNWTSRQTTCYCGDQ--------PCSN 245
Query: 172 DQSYKS 177
QS KS
Sbjct: 246 GQSQKS 251
>Medtr7g082533.1 | wall-associated receptor kinase carboxy-terminal
protein | HC | chr7:31634330-31633419 | 20130731
Length = 293
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 8 YKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDC-----V 62
YK+LE + L+V R DY +CP+ NT+LD F S NLTL+YDC +
Sbjct: 84 YKILEVSDSDHRLKVVRTDYWNNVCPTSLKNTTLDCTFFDYGSDSHNLTLYYDCPHTPFL 143
Query: 63 VPNAVP--FPCVPNSGSGQHVYA---------QLGSFDFTSMFCKQSXXXXXXXXXXDIT 111
+P++ F C N + + L SF T CK +
Sbjct: 144 MPDSFSPQFNCSINGTQMVNYFMLESVADNAESLDSFSETLRTCKSRVVVPFLESEAERV 203
Query: 112 DVNKTLSAIR----NGFVVNWIAGIQECEECRKAGGVCGYDSIRP--TCYCRE 158
N ++ ++ NGF V W A C EC+ +GG CGY+S TC+C++
Sbjct: 204 ATNSSVENLKDVIDNGFGVEWNANNSLCHECQSSGGHCGYESSSREFTCFCKD 256
>Medtr8g104520.1 | receptor-like kinase | HC |
chr8:44032465-44036466 | 20130731
Length = 656
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCVVPNA 66
++ VL ++++ R + + ++C S F NTSL+ F QNLT+FY+C + N+
Sbjct: 81 KFNVLNINQTASTMKIVRTNLINDICSSNFTNTSLNGSPFTFLPNVQNLTVFYNCPIENS 140
Query: 67 V-------PFPCVPNSGSGQHV-YAQLGSFDFTSMFCKQSXXXXXXXXXXDITDVNKT-L 117
F C N+GS +HV Y + F + V+++ +
Sbjct: 141 SIIGKNINSFTC-ENNGSNKHVFYVVKNETQLQNQFSNLQNCGASVQVQVSMDGVSESGV 199
Query: 118 SAIRNGFVVNWIAGI---QECEECRKAGGVCGY---DSIRPTCYC 156
++ GF V + G ECE CR++GG CG DS + +CYC
Sbjct: 200 EVVQEGFDVKYDEGAGWSSECEVCRESGGTCGTNQNDSSQFSCYC 244
>Medtr7g082537.1 | wall-associated receptor kinase carboxy-terminal
protein | LC | chr7:31636801-31635342 | 20130731
Length = 263
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLES--QYQ----- 53
+ +NDV+Y++LE + L V R DY +C ++ V+ S P ES Q+Q
Sbjct: 82 ITINDVKYRILEWDNTTQKLTVARDDYWGGIC-TVSVSVSDKPNNSTFESADQFQPYGSV 140
Query: 54 --NLTLFYDC--VVPNAVPFPCVPNSGSGQHVYAQLGSFDFTSMFCKQSXXXXXXXXXXD 109
L L Y+C V N V N G V L S+ C S
Sbjct: 141 SSQLNLLYNCDTTVLNVVY---SANCGGNIEVVYTLSDPRSLSLTCNLSVIIAIPISVTR 197
Query: 110 ITDVNKTLSAIRNGFVVNWIAGIQECEECRKAGGVCGYDSIRPTCYCRERDQT 162
IT+++ A++ GF + W+ +C+ C +GG CG + C+C + T
Sbjct: 198 ITNLDDINEALQGGFDLRWMGNYADCQRCVDSGGACGNNGTEFRCFCNDGAYT 250
>Medtr6g083000.1 | wall-associated receptor kinase carboxy-terminal
protein | LC | chr6:31009108-31010220 | 20130731
Length = 349
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQ------ELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
++ +++ + LR+ R+D CP ++N +LD + F S Y+ TL Y+
Sbjct: 87 KFHIIDINQTSQVLRIARLDLWSYDSATIASCPKKYINVTLDSEFFNYTSNYEKYTLLYE 146
Query: 61 CVVPNAVPFPCVPNSGS---------------GQHVYAQLGSFDFTSMFCKQSXXXXXXX 105
C ++P P + GS +V + DF S+ CK +
Sbjct: 147 C---GSLPDPYSSSLGSEVSQFISCLIDGKPRDAYVVSSAKVADFISLGCKNNITIPGLN 203
Query: 106 XXXDITDVNKTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRPTCYC 156
+ D + + + GF V W +G++E C+ C K+GG CGY++ C
Sbjct: 204 SSF-LEDSDLVTNVLDQGFEVKW-SGVEEDICDGCMKSGGRCGYNTTENVVLC 254
>Medtr6g082940.1 | wall-associated receptor kinase carboxy-terminal
protein | LC | chr6:30989453-30991565 | 20130731
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQ------ELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
++ +++ + LR+ R+D CP ++N +LD + F S Y+ TL Y+
Sbjct: 86 KFHIIDINQTSQVLRIARLDLWSYDSATIASCPKKYINVTLDSEFFNYTSNYEKYTLLYE 145
Query: 61 CVVPNAVPFPCVPNSGS---------------GQHVYAQLGSFDFTSMFCKQSXXXXXXX 105
C ++P P + GS ++ + DF + CK +
Sbjct: 146 C---GSLPDPYSSSLGSEVSQFISCLIEDKPRDAYLMSSAKVADFIDLGCKNNITIPGLN 202
Query: 106 XXXDITDVNKTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRPTCYC 156
+ D + + + GF V W +G++E C+ C K+GG CGY++ C
Sbjct: 203 SSF-LEDSDSVANVLDEGFEVKW-SGVEEDICDGCMKSGGRCGYNTTENVVLC 253
>Medtr6g082920.1 | wall-associated receptor kinase carboxy-terminal
protein | LC | chr6:30983289-30985412 | 20130731
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQ------ELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
++ +++ + LR+ R+D CP ++N +LD + F S Y+ TL Y+
Sbjct: 86 KFHIIDINQTSQVLRIARLDLWSYDSATIASCPKKYINVTLDSEFFNYTSNYEKYTLLYE 145
Query: 61 CVVPNAVPFPCVPNSGS---------------GQHVYAQLGSFDFTSMFCKQSXXXXXXX 105
C ++P P + GS ++ + DF + CK +
Sbjct: 146 C---GSLPDPYSSSLGSEVSQFISCLIEDKPRDAYLMSSAKVADFIDLGCKNNITIPGLN 202
Query: 106 XXXDITDVNKTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRPTCYC 156
+ D + + + GF V W +G++E C+ C K+GG CGY++ C
Sbjct: 203 SSF-LEDSDSVANVLDEGFEVKW-SGVEEDICDGCMKSGGRCGYNTTENVVLC 253
>Medtr6g083020.1 | wall-associated kinase-like protein | HC |
chr6:31015291-31018777 | 20130731
Length = 659
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 19 SLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCVVPNAVPFP-----CVP 73
S + +D +E CP+ N SLD F + NL+ FY+C + +P C
Sbjct: 101 SFIASNLDVYEENCPAPMYNYSLDQTPFTYSFENSNLSFFYNCTT-EPIDYPTYEIECAT 159
Query: 74 NSGSGQHVYAQLGSFDFTSMFCKQSXXXXXXXXXXDITDVNKT-------LSAIRNGFVV 126
N+ + + + + + T+VN T + ++ G V+
Sbjct: 160 NATHYSFAVFHKEALEHKNYSLNECQFMVNAPLVLN-TNVNFTSLLKMNYIDVLKMGSVL 218
Query: 127 NWIAGIQECEECRKAGGVCGYDSIRPTCYCRER 159
NW A +C+ C K+GG CG+D+ + C+C+++
Sbjct: 219 NWTA--PDCQHCEKSGGRCGFDNYKFICFCKDK 249
>Medtr7g082470.1 | receptor-like kinase | HC |
chr7:31610689-31607744 | 20130731
Length = 650
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCP----SIFVNTSLDPK-------LFVLE 49
+ +N V+Y++LE + LRV R DY +C +N +PK LF +
Sbjct: 68 ITINLVKYRILEWDNTTQRLRVARDDYWSGICAVNVRDNIMNVGENPKNSTFGNTLFQRD 127
Query: 50 SQYQNLTLFYDCVVPNAVPFPCVPNSGSGQHVYAQLGSFDFTSMFCKQSXXXXX---XXX 106
Q +TL Y CV N G V + D +++ C S
Sbjct: 128 GSSQ-VTLLYGCV-ENQQSMVYGITCGEYTDVLYTVADAD-SALPCVSSFIIVIPILGTQ 184
Query: 107 XXDITDVNKTLSAIRNGFVVNWIAGIQECEECRKAGGVCGYD-SIRPTCYCRERDQT 162
+ + N A++NGF + W EC+ C +GGVCG D + C+C++ T
Sbjct: 185 AAHVVNSNGLNQALKNGFELRWTGNYGECQRCIDSGGVCGNDGGTQFRCFCKDGSNT 241
>Medtr1g115485.1 | receptor-like kinase | LC |
chr1:52170285-52176416 | 20130731
Length = 809
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 6 VRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCVV-- 63
++Y +LE + LRVTR DY ++ N + + LF L N+TLFY C++
Sbjct: 84 LKYSILEWDNSTQKLRVTREDYSRDDVCVPVDNITFNSTLFKLYDDVANVTLFYYCLLTT 143
Query: 64 ---PNAVPFPCVPNSGSGQHVYAQLGSFDFT-SMFCKQSXXXXX----XXXXXDITDVNK 115
PN F V S + +Y + T S C + N
Sbjct: 144 ETLPNT--FHSVECSDNSSVLYTLVDPSTATYSDLCDPMVITIMIPILETRAAQLGSGNG 201
Query: 116 TLS-AIRNGFVVNWIAGIQECEECRKAGGVCGYDSIRP-TCYCRERDQT--CPEELPSSD 171
T+S I++GF + W EC+ C +GG CG D C+C++ T C E+ +
Sbjct: 202 TISDVIKDGFDLKWTGDYGECQRCVVSGGACGNDGGSEFQCFCKDGPHTTSCISEISPAS 261
Query: 172 DQS 174
+ S
Sbjct: 262 ENS 264
>Medtr7g082460.1 | receptor-like kinase | HC |
chr7:31606935-31604101 | 20130731
Length = 665
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLE-SQYQ------ 53
+N+NDV+Y++L+ + L V R D +C VN S +PK + + +Q
Sbjct: 89 ININDVKYRILDWNDTIQKLTVAREDCWSGICA---VNVSSNPKNSTFDNTMFQRDGDVS 145
Query: 54 -NLTLFYDCVVPNAVPFPCVPNSGSGQHVYAQLGSFDFT---SMFCKQSXXXXXXXXXXD 109
N++L Y+C F + + S T S+ +
Sbjct: 146 YNVSLLYNCETSITNIFSTTCGNTKVSYTIVDPASASLTCTPSVIVEFPILAVQVRQIAT 205
Query: 110 ITDVNKTLSAIRNGFVVNWIAGIQECEECRKAGGVCGYD--SIRPTCYCRERDQT 162
+ D+NK A++ GF + W EC++C + GVCG + C+C++ T
Sbjct: 206 LNDINK---ALQGGFDLKWTGNYGECQKCVDSDGVCGSNDGGNEFRCFCKDGSHT 257
>Medtr6g082820.1 | wall-associated receptor kinase carboxy-terminal
protein | LC | chr6:30941393-30943833 | 20130731
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 28/173 (16%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQE------LCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
++ +++ + LR+ R+D CP ++ +LD F S+Y+ TL Y+
Sbjct: 86 KFHIIDINQTSRLLRIARLDLWSNDAATIVSCPKKYIIVNLDLDFFNYTSKYEKYTLLYE 145
Query: 61 CVVPNAVPFP---------------CVPNSGSGQHVYAQLGSFDFTSMFCKQSXXXXXXX 105
C +P P + ++ + DF + C +
Sbjct: 146 C---GPLPDPYSSSLSSEVSQVISCLIEGKPRNAYLVSSAKVVDFIGLGCMNNITIPGLK 202
Query: 106 XXXDITDVNKTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRPTCYC 156
I D + + + GF V W +G++E C+ C K+GG CGY++ C
Sbjct: 203 SSI-IEDSDSVVDVLDKGFDVRW-SGVEEDICDGCIKSGGRCGYNASENAVLC 253
>Medtr6g083010.1 | wall-associated receptor kinase
galacturonan-binding protein | LC |
chr6:31012211-31014135 | 20130731
Length = 289
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCVVPNA 66
++ VL+ ++ ++++ R D Q LC + +T L P LF S N+T+FY+C +
Sbjct: 97 KFTVLDINIEKHTMKLKRTDLDQNLCSPQYNDTYLFPPLFQYPSTVNNITIFYNCTPSQS 156
Query: 67 VPFPCVPNSGSGQHVYAQLGSFDFT------SMFCKQSXXXXXX------XXXXDITDVN 114
+ GS H + +G+ D CK+ I D++
Sbjct: 157 KDK--ISLCGSQNHAFCHVGNQDILLKEYPELKNCKRHVQVPAGEGFPLWHFYDGIVDID 214
Query: 115 KTLSAIRNGFVVNWIAGIQECEECRKA-GGVCGYDSIR 151
S + NGF VN+ +EC +C + G C + S R
Sbjct: 215 NLKSGLNNGFEVNYSVK-EECAKCLGSEEGDCKWKSNR 251