Miyakogusa Predicted Gene

Lj1g3v3278870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3278870.1 Non Characterized Hit- tr|I1HFL5|I1HFL5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,71.7,0.000000000000005,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LISH,LisH dimerisation motif,CUFF.30296.1
         (58 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g082650.1 | lisH domain and HEAT repeat KIAA1468-like prot...   112   1e-25
Medtr7g082650.2 | lisH domain and HEAT repeat KIAA1468-like prot...   111   1e-25
Medtr6g004240.1 | lisH domain and HEAT repeat KIAA1468-like prot...   102   6e-23

>Medtr7g082650.1 | lisH domain and HEAT repeat KIAA1468-like
          protein | HC | chr7:31686283-31675332 | 20130731
          Length = 1176

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 1  MDVERSSLCNCVVNFLLEENYVLTAFELLHELLDDGRDDQAIRLKQYFSDPSLFPPDQ 58
          M+V+RSSLCNCVVNFLLEENYVLTAFELLHELLDDG DDQAIRLKQYFSD SLFP DQ
Sbjct: 1  MNVDRSSLCNCVVNFLLEENYVLTAFELLHELLDDGHDDQAIRLKQYFSDQSLFPADQ 58


>Medtr7g082650.2 | lisH domain and HEAT repeat KIAA1468-like
          protein | HC | chr7:31686524-31675023 | 20130731
          Length = 1048

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 1  MDVERSSLCNCVVNFLLEENYVLTAFELLHELLDDGRDDQAIRLKQYFSDPSLFPPDQ 58
          M+V+RSSLCNCVVNFLLEENYVLTAFELLHELLDDG DDQAIRLKQYFSD SLFP DQ
Sbjct: 1  MNVDRSSLCNCVVNFLLEENYVLTAFELLHELLDDGHDDQAIRLKQYFSDQSLFPADQ 58


>Medtr6g004240.1 | lisH domain and HEAT repeat KIAA1468-like
          protein | HC | chr6:200836-208064 | 20130731
          Length = 1177

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 52/55 (94%)

Query: 4  ERSSLCNCVVNFLLEENYVLTAFELLHELLDDGRDDQAIRLKQYFSDPSLFPPDQ 58
          ++SSLCNCVVNFLLEENY+LTAFELLHELLDDGR +QAIRL+QYFSDPS FP +Q
Sbjct: 6  QKSSLCNCVVNFLLEENYILTAFELLHELLDDGRTNQAIRLQQYFSDPSRFPSNQ 60