Miyakogusa Predicted Gene

Lj1g3v3254660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3254660.1 Non Characterized Hit- tr|K3YJA2|K3YJA2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014321,43.14,1e-17,zf-met,NULL; seg,NULL;
coiled-coil,NULL,CUFF.30281.1
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g082850.1 | C2H2 type zf-met: zinc-finger protein | HC | c...   173   1e-43

>Medtr7g082850.1 | C2H2 type zf-met: zinc-finger protein | HC |
           chr7:31771174-31776055 | 20130731
          Length = 292

 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 120/188 (63%), Gaps = 17/188 (9%)

Query: 1   MIKRRFYRLDRGDKXX--------------XXXXXXXXXXXXXXXXXXAXXXXXXXXXXX 46
           MIKRRF+++D GD+                                              
Sbjct: 1   MIKRRFFKVDHGDRDGSGNSSSSSDEDYDNNQVAQVSDDNDDNDSDGEVSSASSGYKSED 60

Query: 47  XXVKEVDVNSAGLLSSDDDAGTIREKQVLINRELPNKRYSEKSNASAMAEEKPLPTEM-T 105
               ++D NSAGLLSS+DDAGTI E++++ N+E P++R  EKSN   MAE+KPLP+++ +
Sbjct: 61  SPANDIDANSAGLLSSEDDAGTINEREMITNKEFPSERNYEKSNV--MAEKKPLPSDIPS 118

Query: 106 SYILQCKSVFKCRICPRIICLSEDTLRDHLQSKRHARSEKLYKQGRLKAMLNINGEIEND 165
           S +LQ KSVFKCR+CPR+ICL+EDTLR+HLQSKRHARSEKL+++GRLKAMLN +GEIE+ 
Sbjct: 119 SLVLQIKSVFKCRLCPRVICLTEDTLRNHLQSKRHARSEKLHEKGRLKAMLNSDGEIEDQ 178

Query: 166 EDSETEIQ 173
           E S+ E +
Sbjct: 179 EVSDNEAE 186