Miyakogusa Predicted Gene
- Lj1g3v3244640.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3244640.2 tr|G7L416|G7L416_MEDTR Tubulin gamma chain
OS=Medicago truncatula GN=MTR_7g117050 PE=3 SV=1,98.6,0,Tubulin
C-terminal domain-like,Tubulin/FtsZ, C-terminal; Tubulin
nucleotide-binding domain-like,Tubu,CUFF.30272.2
(227 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g117050.1 | tubulin | HC | chr7:48332494-48327570 | 20130731 434 e-122
Medtr4g017630.1 | tubulin beta-1 chain | HC | chr4:5530321-55332... 147 8e-36
Medtr8g107250.1 | tubulin | HC | chr8:45318751-45321187 | 20130731 144 8e-35
Medtr4g094535.1 | tubulin | HC | chr4:38179308-38176632 | 20130731 143 1e-34
Medtr2g031310.1 | tubulin beta-1 chain | HC | chr2:11734721-1173... 143 1e-34
Medtr8g098360.1 | tubulin beta-1 chain | HC | chr8:40920094-4091... 142 3e-34
Medtr1g101130.1 | tubulin beta-1 chain | HC | chr1:45455016-4545... 142 4e-34
Medtr7g089120.2 | tubulin beta-1 chain | HC | chr7:34839382-3484... 141 4e-34
Medtr7g089120.1 | tubulin beta-1 chain | HC | chr7:34839307-3484... 141 4e-34
Medtr7g089120.3 | tubulin beta-1 chain | HC | chr7:34839307-3484... 141 4e-34
Medtr4g019110.1 | tubulin beta-1 chain | HC | chr4:5936956-59341... 141 4e-34
Medtr4g019090.1 | tubulin beta-1 chain | HC | chr4:5923540-59208... 141 5e-34
Medtr3g113970.2 | tubulin beta-1 chain | HC | chr3:53148865-5314... 141 6e-34
Medtr3g113970.1 | tubulin beta-1 chain | HC | chr3:53148865-5314... 141 6e-34
Medtr7g085800.1 | tubulin beta-1 chain | HC | chr7:33268219-3327... 116 2e-26
Medtr8g085980.1 | tubulin beta-1 chain | HC | chr8:35671015-3566... 112 2e-25
Medtr3g110720.1 | tubulin beta-1 chain | HC | chr3:51753324-5175... 112 2e-25
Medtr4g097830.1 | tubulin beta-1 chain | HC | chr4:40379458-4037... 112 3e-25
Medtr1g106005.1 | tubulin beta-1 chain | HC | chr1:47930116-4792... 112 3e-25
Medtr6g029190.1 | tubulin beta-1 chain | HC | chr6:10034571-1003... 106 2e-23
Medtr2g041670.1 | tubulin beta-1 chain | HC | chr2:18307813-1830... 87 1e-17
Medtr2g041400.1 | tubulin beta-1 chain | HC | chr2:18161470-1816... 82 3e-16
Medtr3g063410.1 | tubulin alpha-1 chain | HC | chr3:28713344-287... 54 1e-07
>Medtr7g117050.1 | tubulin | HC | chr7:48332494-48327570 | 20130731
Length = 474
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/215 (98%), Positives = 213/215 (99%)
Query: 9 AGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 68
+GMGSYLLE LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 69 NTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 128
NTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC
Sbjct: 207 NTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 266
Query: 129 HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNII 188
HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNII
Sbjct: 267 HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNII 326
Query: 189 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVC 223
QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV
Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
>Medtr4g017630.1 | tubulin beta-1 chain | HC | chr4:5530321-5533227
| 20130731
Length = 449
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD V+VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L LSNP+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRILKLSNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R +V ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRTLSVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMMNVQNKNSSYFVEWIPNNVKSTVC 354
>Medtr8g107250.1 | tubulin | HC | chr8:45318751-45321187 | 20130731
Length = 446
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 211 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 270
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT + N R TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 271 FAPLTSQGSQN-YRALTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAVFRGKMST 324
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 325 KEVDEQVMNVQNKNSSYFVEWIPNNVKSSVC 355
>Medtr4g094535.1 | tubulin | HC | chr4:38179308-38176632 | 20130731
Length = 444
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ PTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R +V ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRNLSVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
>Medtr2g031310.1 | tubulin beta-1 chain | HC |
chr2:11734721-11731386 | 20130731
Length = 445
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ PTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
>Medtr8g098360.1 | tubulin beta-1 chain | HC |
chr8:40920094-40915697 | 20130731
Length = 445
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 124/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+NP+F N L+ST MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + T+ ++ +++ A+N+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYSSLTIPELTQQMWDARNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V + + ++ + F+EW P +++ VC
Sbjct: 324 KEVDQQMINVQNKNSSYFVEWIPNNVKSSVC 354
>Medtr1g101130.1 | tubulin beta-1 chain | HC |
chr1:45455016-45451967 | 20130731
Length = 449
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVC 354
>Medtr7g089120.2 | tubulin beta-1 chain | HC |
chr7:34839382-34842705 | 20130731
Length = 449
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
>Medtr7g089120.1 | tubulin beta-1 chain | HC |
chr7:34839307-34842729 | 20130731
Length = 449
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
>Medtr7g089120.3 | tubulin beta-1 chain | HC |
chr7:34839307-34842729 | 20130731
Length = 449
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
>Medtr4g019110.1 | tubulin beta-1 chain | HC | chr4:5936956-5934146
| 20130731
Length = 449
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +L+P PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMLG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R +V ++ +++ +KN+M ++ D +Y++ I +G++
Sbjct: 270 FAPLT-SRGSQQYRALSVPEITQQMWDSKNMMCAA-----DPRHGRYLTASAIFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVC 354
>Medtr4g019090.1 | tubulin beta-1 chain | HC | chr4:5923540-5920811
| 20130731
Length = 449
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMLG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R +V ++ +++ +KN+M ++ D +Y++ I +G++
Sbjct: 270 FAPLT-SRGSQQYRALSVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAIFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVC 354
>Medtr3g113970.2 | tubulin beta-1 chain | HC |
chr3:53148865-53144674 | 20130731
Length = 450
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 153 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 211
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L LS P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 212 ICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 271
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 272 FAPLT-SRGSQQYVSLTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 325
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 326 KEVDEQIINVQNKNSSYFVEWIPNNVKSSVC 356
>Medtr3g113970.1 | tubulin beta-1 chain | HC |
chr3:53148865-53145325 | 20130731
Length = 450
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 153 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 211
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L LS P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 212 ICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 271
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 272 FAPLT-SRGSQQYVSLTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 325
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 326 KEVDEQIINVQNKNSSYFVEWIPNNVKSSVC 356
>Medtr7g085800.1 | tubulin beta-1 chain | HC |
chr7:33268219-33271648 | 20130731
Length = 451
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 115/208 (55%), Gaps = 8/208 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK ++++P+ + S VV+PYNS+L+ L + D VV+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDIC 213
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
+ L + PT+ N L+S V+S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RKSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYA 273
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P+ +A + +V ++ + + ++M D KY++ + +G+V P
Sbjct: 274 PVISSAKA-YHEQISVPEITNAVFEPSSMMAKC-----DPRHGKYMACCLMYRGDVVPKD 327
Query: 197 VHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ V F++W P + CG
Sbjct: 328 VNAAVSNIKTKRTVQFVDWCPTGFK-CG 354
>Medtr8g085980.1 | tubulin beta-1 chain | HC |
chr8:35671015-35668198 | 20130731
Length = 449
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK ++++P+ + S VV+PYNS+L+ L + D V+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT+ N L+S ++S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P+ +A + +V ++ + + ++M D KY++ + +G+V P
Sbjct: 274 PVISAAKA-YHEQLSVPEITNAVFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPKD 327
Query: 197 VHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ V F++W P + CG
Sbjct: 328 VNAAVGTIKTKRTVQFVDWCPTGFK-CG 354
>Medtr3g110720.1 | tubulin beta-1 chain | HC |
chr3:51753324-51750944 | 20130731
Length = 451
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D V+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-YHEQLSVAEITNSAFEPSSMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVATIKTKRTIQFVDWCPTGFK-CG 354
>Medtr4g097830.1 | tubulin beta-1 chain | HC |
chr4:40379458-40376868 | 20130731
Length = 451
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D V+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-YHEQLSVAEITNSAFEPSSMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVATIKTKRTIQFVDWCPTGFK-CG 354
>Medtr1g106005.1 | tubulin beta-1 chain | HC |
chr1:47930116-47927183 | 20130731
Length = 450
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D V+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-YHEQLSVAEITNSAFEPSSMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVATIKTKRTIQFVDWCPTGFK-CG 354
>Medtr6g029190.1 | tubulin beta-1 chain | HC |
chr6:10034571-10031021 | 20130731
Length = 448
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK + ++P+ + S VV+PYN++L+ ++D V++LDN A+ I
Sbjct: 156 ERLSVDYGKKSKLGFIIYPSP-QVSTAVVEPYNTVLSNHSHIEHSDVVILLDNEAIYDIC 214
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT+ N L+S +S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 215 RRSLDIERPTYNNLNRLISQSISSLTTSLRFDGAINVDISEFQTNLVPYPRIHFMLSSYA 274
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P+ + + +V ++ R + + ++MV D KY++ + +G++ P
Sbjct: 275 PVISSVKV-YHEQLSVPEITRAVFEPSSMMVKC-----DPRHGKYMACCLMYRGDIVPKD 328
Query: 197 VHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I++ + V F++W P + CG
Sbjct: 329 VNVAVSHIKKMRTVQFVDWCPTGFK-CG 355
>Medtr2g041670.1 | tubulin beta-1 chain | HC |
chr2:18307813-18306110 | 20130731
Length = 482
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK+ V+P+ S V++PYN++L+ L + D V+LDN ++ I
Sbjct: 150 EHLSAEYGKKIKLGMDVYPSP-HVSTSVLEPYNTVLSTSVLLEHTDMAVLLDNESVYDIC 208
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT+ N L+S V+S+ TT+LR+ +N DL L +L+ HF++T Y
Sbjct: 209 KRSLDILRPTYNNLNCLISQVISSLTTSLRFDASVNVDLNELQTNLVHFHTTHFMLTSYA 268
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
PL + + ++ ++ + ++MV R KY+ + G++ P
Sbjct: 269 PLISANKPYHDQHSSA-EITNSVFNPSSLMVRCNPR-----YGKYLGCCLMYHGDIVPKD 322
Query: 197 VHESLQRIRERKLVNFIEWGPASIQV 222
V ++ I+ + + F++W A +V
Sbjct: 323 VVSAIATIKRNETIQFVDWCTAKFKV 348
>Medtr2g041400.1 | tubulin beta-1 chain | HC |
chr2:18161470-18162999 | 20130731
Length = 424
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK+ V+P+ S V++PYN++L+ L + D V+LDN ++ I
Sbjct: 150 EHLSAEYGKKIKLGMDVYPSP-HVSTSVLEPYNTVLSTSVLLEHTDMAVLLDNESVYDIC 208
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT+ N L+S V+S+ TT+LR+ +N DL L +L+ HF++T Y
Sbjct: 209 KRSLDILRPTYNNLNCLISQVISSLTTSLRFDASVNVDLNELQTNLVLFHTTHFMLTSYA 268
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P + + + ++ + ++MV R K++ + G++ P
Sbjct: 269 PF-ISANKPYHDQLSSAEITNCVFNPSSLMVRCNPR-----YGKFLGCCLMYHGDIVPKD 322
Query: 197 VHESLQRIRERKLVNFIEWGPASIQV 222
V ++ I+ + F++W A +V
Sbjct: 323 VVSAIATIKRNETFQFVDWCSAKFKV 348
>Medtr3g063410.1 | tubulin alpha-1 chain | HC |
chr3:28713344-28713993 | 20130731
Length = 195
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 121 SLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAK 180
+L+P PR HF+++ + P+ +A + +V ++ + ++MV D K
Sbjct: 30 NLVPYPRIHFMLSSFAPVISAEKA-YHEQLSVAEITNSAFEPSSMMVKC-----DPRHGK 83
Query: 181 YISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVCG 224
Y++ + +G+V P V+ ++ IR ++ + F++W P + CG
Sbjct: 84 YMACCLMYRGDVVPKDVNAAVATIRTKRTIQFVDWCPTGFK-CG 126