Miyakogusa Predicted Gene

Lj1g3v3244570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3244570.1 Non Characterized Hit- tr|I1JDM8|I1JDM8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46586
PE,77.43,0,eIF-5_eIF-2B,Translation initiation factor IF2/IF5; W2,W2
domain; no description,Translation initiat,CUFF.30332.1
         (442 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g082940.1 | eukaryotic translation initiation factor 5 | H...   629   e-180
Medtr5g075530.1 | eukaryotic translation initiation factor 2 sub...    61   2e-09
Medtr3g467620.2 | eukaryotic translation initiation factor 2 sub...    58   2e-08
Medtr3g467620.1 | eukaryotic translation initiation factor 2 sub...    58   2e-08

>Medtr7g082940.1 | eukaryotic translation initiation factor 5 | HC |
           chr7:31827109-31830205 | 20130731
          Length = 439

 Score =  629 bits (1621), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 313/440 (71%), Positives = 343/440 (77%), Gaps = 13/440 (2%)

Query: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTN+VNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFG 60

Query: 61  CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKNQMIQ 120
           CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEI+ITK QMIQ
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMIQ 120

Query: 121 LKCAACGFLSDVDMRDKLTTFIVKNPPENKKGSKDKKAMRRAEKERLKQGEAADXXXXXX 180
           +KCAACGF+SDVDMRDKLTTFI+KNPPE+KKG KDKKAMRRAEKERLK+GEAAD      
Sbjct: 121 MKCAACGFVSDVDMRDKLTTFIIKNPPESKKGGKDKKAMRRAEKERLKEGEAADEELKKL 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIXXXXXX-----XXXXXXXVQWLADTSAE 235
                                         H                   VQW  DTS E
Sbjct: 181 KKEAVKKKGAKESTAKTSSSKKKGNGSDEDHTSPTRSQVDEKDEAEDEDDVQWQTDTSLE 240

Query: 236 AARQRIQEQLSAVTADMVMLSTNETEEKKKAGSKADNGSENGNKAHNGSENGNSTNYTTL 295
           AAR RIQEQLSAVTADMVMLST E E+++KA +K  +   NG        NGNS NY TL
Sbjct: 241 AARLRIQEQLSAVTADMVMLSTTEPEKEEKAAAKVSDNPANG--------NGNSMNYKTL 292

Query: 296 VGEVKAYLKKGVSAKELLSHLATISVSAQEKMSALFEALFDGIEKGFAKETIKRKSYLAA 355
           VGE+KA LKKG SAKEL++H A++ VS QEKMSAL+EALF  IEKGFAKE IK+K+YLAA
Sbjct: 293 VGEIKADLKKGASAKELVAHWASLPVSPQEKMSALYEALFGDIEKGFAKEAIKKKNYLAA 352

Query: 356 AVAEEEGSQLLLLHAIEEFSCKSASSALKEVALILKTLYDADVLDEDNIVQWYQKGLKGD 415
           AVA EEG  LLLL AIEEFSCKS S+ALKEVAL+LK LYDAD L+E++I+QWYQ+GLKGD
Sbjct: 353 AVAVEEGMPLLLLRAIEEFSCKSTSNALKEVALVLKALYDADALEEEHILQWYQEGLKGD 412

Query: 416 DKNSVIWKNVKPFIEWLQTA 435
            KN+ IWKNVKPFIEWLQ+A
Sbjct: 413 TKNAQIWKNVKPFIEWLQSA 432


>Medtr5g075530.1 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr5:32120341-32114833 | 20130731
          Length = 322

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 35  KTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
           KT  VN +D+ K++ RP  +   +   ELG     D +     V G        G+L  +
Sbjct: 209 KTVFVNFMDLCKSMHRPPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 267

Query: 95  IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
           I +YV C GC +P+T +L  +N++  L+C  CG
Sbjct: 268 INEYVICIGCKSPDT-LLSKENRLFFLRCEKCG 299


>Medtr3g467620.2 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr3:27896951-27892542 | 20130731
          Length = 269

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 35  KTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
           KT  VN +D+ K + R   +   +   ELG     D +     V G        G+L  +
Sbjct: 155 KTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 213

Query: 95  IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
           I +YV C GC +P+T IL  +N++  L+C  CG
Sbjct: 214 INEYVICLGCKSPDT-ILSKENRLFFLRCEKCG 245


>Medtr3g467620.1 | eukaryotic translation initiation factor 2
           subunit beta | HC | chr3:27896952-27892542 | 20130731
          Length = 269

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 35  KTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
           KT  VN +D+ K + R   +   +   ELG     D +     V G        G+L  +
Sbjct: 155 KTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 213

Query: 95  IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
           I +YV C GC +P+T IL  +N++  L+C  CG
Sbjct: 214 INEYVICLGCKSPDT-ILSKENRLFFLRCEKCG 245