Miyakogusa Predicted Gene

Lj1g3v3221300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3221300.1 tr|A9T4N0|A9T4N0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88027
,37.8,2e-19,EF_HAND_2,EF-HAND 2; EF_HAND_1,EF-Hand 1, calcium-binding
site; EF_hand_5,NULL; no description,EF-ha,CUFF.30234.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g024890.1 | calcium-binding EF-hand protein | HC | chr7:82...   230   3e-61
Medtr7g024873.1 | calcium-binding EF-hand protein | HC | chr7:82...   230   4e-61
Medtr7g024880.1 | calcium-binding EF-hand protein | HC | chr7:82...   229   8e-61
Medtr8g446810.1 | calcium-binding EF-hand protein | HC | chr8:18...   135   1e-32
Medtr1g081270.1 | EF-hand protein | HC | chr1:36168657-36170148 ...    86   1e-17
Medtr7g024900.1 | calcium ion-binding protein, putative | HC | c...    82   2e-16
Medtr4g075610.1 | calcium-binding EF-hand protein | HC | chr4:28...    50   5e-07
Medtr4g075610.2 | calcium-binding EF-hand protein | HC | chr4:28...    50   6e-07
Medtr3g117680.3 | calcium-binding EF-hand protein | HC | chr3:55...    50   6e-07
Medtr3g117680.1 | calcium-binding EF-hand protein | HC | chr3:55...    50   6e-07
Medtr3g117680.4 | calcium-binding EF-hand protein | HC | chr3:55...    50   8e-07

>Medtr7g024890.1 | calcium-binding EF-hand protein | HC |
           chr7:8237131-8236498 | 20130731
          Length = 137

 Score =  230 bits (587), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 127/137 (92%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFG 60
           MSVEILDGATIV+FLEDEEAF+ S+ NRFA LDTN DG LSY+EMLKEL+SLR+ ETHFG
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNNDGLLSYEEMLKELRSLRIFETHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV+ +P+ELARVYESLFIQFDHNLNG++DLEEFK ET++MMLAMADGMGF+P+QMVLEE
Sbjct: 61  IDVDSDPNELARVYESLFIQFDHNLNGTIDLEEFKKETKQMMLAMADGMGFMPIQMVLEE 120

Query: 121 DSILKKAVERECNKVAA 137
           DSILKKAVE + NKVAA
Sbjct: 121 DSILKKAVEIDSNKVAA 137


>Medtr7g024873.1 | calcium-binding EF-hand protein | HC |
           chr7:8224031-8223374 | 20130731
          Length = 137

 Score =  230 bits (586), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 112/137 (81%), Positives = 127/137 (92%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFG 60
           MSVEILDGATIV+FLEDEEAF+ S+ NRFA LDTNKDG LSY EMLKEL+SLRV ETHFG
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNKDGLLSYDEMLKELRSLRVFETHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV+ +P+ELARVYESLFIQFDHNLNG+VDLEEFK ET+++MLAMADGMGF+P+QMVLEE
Sbjct: 61  IDVDSDPNELARVYESLFIQFDHNLNGTVDLEEFKKETKQIMLAMADGMGFMPIQMVLEE 120

Query: 121 DSILKKAVERECNKVAA 137
           DSILK AVERE +K+AA
Sbjct: 121 DSILKIAVERESSKLAA 137


>Medtr7g024880.1 | calcium-binding EF-hand protein | HC |
           chr7:8233991-8233175 | 20130731
          Length = 137

 Score =  229 bits (583), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 125/137 (91%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFG 60
           MSVEILDGATIV+FLEDEEAF+ S+ NRFA LDTN DG LSY+EMLKEL+SLRV ETHFG
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNNDGLLSYEEMLKELRSLRVFETHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV  +P+ELARVYESLF QFDHNLNG++DLEEFK ET++MMLAMADGMGF+P+QMVLE+
Sbjct: 61  IDVVSDPNELARVYESLFTQFDHNLNGTIDLEEFKKETKQMMLAMADGMGFMPIQMVLEK 120

Query: 121 DSILKKAVERECNKVAA 137
           DSILKKAVERE N VAA
Sbjct: 121 DSILKKAVEREYNNVAA 137


>Medtr8g446810.1 | calcium-binding EF-hand protein | HC |
           chr8:18319909-18319217 | 20130731
          Length = 141

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/140 (49%), Positives = 99/140 (70%), Gaps = 3/140 (2%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFG 60
           M V I+DG T+ +F+ D+  F  SI  +F  LD N DG LS  E+ K  +S+R++E+HFG
Sbjct: 1   MGVVIIDGTTVRDFIADDTHFTNSINEQFTSLDLNNDGVLSRAELRKAFESMRLIESHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV   P++L R+Y+S+F  FD + +GSVD EEFK E +++MLA+ADG+G  P+QMVLE+
Sbjct: 61  IDVTTPPEQLTRLYDSVFDTFDGDGSGSVDREEFKNEMKKIMLAIADGLGSSPIQMVLED 120

Query: 121 D---SILKKAVERECNKVAA 137
           D   ++LKKA + E +K AA
Sbjct: 121 DDEMNLLKKAADLEASKNAA 140


>Medtr1g081270.1 | EF-hand protein | HC | chr1:36168657-36170148 |
           20130731
          Length = 134

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFG 60
           M+V +++  T+ +F+ D   FD  +   FA+LD N DG LS  E+         L +H  
Sbjct: 1   MNVAVVNSTTVTDFVNDTTNFDSFVKEWFAMLDANGDGNLSRDEIRGGFAWFMPLGSH-- 58

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
                + +E+ R+ E +F +FD + N S+DL  FK    E+M A+A G+G  P+ +VLE+
Sbjct: 59  ---SQSQEEIDRILELIFTRFDEDQNDSLDLNGFKSLMTEIMNAVARGIGGSPIIVVLEK 115

Query: 121 DSILKKAVERE 131
           DS+L KAV+RE
Sbjct: 116 DSLLMKAVQRE 126


>Medtr7g024900.1 | calcium ion-binding protein, putative | HC |
          chr7:8240024-8239857 | 20130731
          Length = 55

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 46/51 (90%)

Query: 1  MSVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQS 51
          MSVEILDGATIV+FLEDEEAF+ S+ N+FA LDTNKDG LSY EMLKEL+S
Sbjct: 1  MSVEILDGATIVHFLEDEEAFNSSVGNQFARLDTNKDGLLSYDEMLKELRS 51


>Medtr4g075610.1 | calcium-binding EF-hand protein | HC |
           chr4:28897277-28893295 | 20130731
          Length = 375

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 7/115 (6%)

Query: 2   SVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQ-SLRVLETHFG 60
           +VE+LDG+ I+  + +++ F   + ++F  LD +KDG+LS    L ELQ ++  + +  G
Sbjct: 17  AVEVLDGSNIMELVGNKDVFSNFVNHKFQELDRDKDGKLS----LTELQPAVSDIGSALG 72

Query: 61  IDVE-PNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +  +  NPD    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 73  LPAKGTNPDS-DHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPI 126


>Medtr4g075610.2 | calcium-binding EF-hand protein | HC |
           chr4:28897198-28893295 | 20130731
          Length = 271

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 7/115 (6%)

Query: 2   SVEILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQ-SLRVLETHFG 60
           +VE+LDG+ I+  + +++ F   + ++F  LD +KDG+LS    L ELQ ++  + +  G
Sbjct: 17  AVEVLDGSNIMELVGNKDVFSNFVNHKFQELDRDKDGKLS----LTELQPAVSDIGSALG 72

Query: 61  IDVE-PNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +  +  NPD    +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 73  LPAKGTNPDS-DHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPI 126


>Medtr3g117680.3 | calcium-binding EF-hand protein | HC |
           chr3:55094884-55098943 | 20130731
          Length = 296

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 4   EILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFGIDV 63
           E+LDG+ I+  + +E+ F+  + ++F  LD ++DG+LS KE+   +  +       G+  
Sbjct: 11  EVLDGSNIMELVGNEQGFNKFVDHKFHELDKDRDGKLSLKELEPAVADIGAA---LGLPA 67

Query: 64  EPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +    +   +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 68  QGTTPDSDHIYYQVLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPI 118


>Medtr3g117680.1 | calcium-binding EF-hand protein | HC |
           chr3:55094884-55099534 | 20130731
          Length = 362

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 4   EILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFGIDV 63
           E+LDG+ I+  + +E+ F+  + ++F  LD ++DG+LS KE+   +  +       G+  
Sbjct: 11  EVLDGSNIMELVGNEQGFNKFVDHKFHELDKDRDGKLSLKELEPAVADIGAA---LGLPA 67

Query: 64  EPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +    +   +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 68  QGTTPDSDHIYYQVLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPI 118


>Medtr3g117680.4 | calcium-binding EF-hand protein | HC |
           chr3:55094884-55099534 | 20130731
          Length = 262

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 4   EILDGATIVNFLEDEEAFDISICNRFALLDTNKDGRLSYKEMLKELQSLRVLETHFGIDV 63
           E+LDG+ I+  + +E+ F+  + ++F  LD ++DG+LS KE+   +  +       G+  
Sbjct: 11  EVLDGSNIMELVGNEQGFNKFVDHKFHELDKDRDGKLSLKELEPAVADIGAA---LGLPA 67

Query: 64  EPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPV 114
           +    +   +Y  +  +F H     V   EFK    +++L MA G+   P+
Sbjct: 68  QGTTPDSDHIYYQVLNEFTHGKQEKVSKSEFKEVLSDILLGMAAGLKRDPI 118