Miyakogusa Predicted Gene

Lj1g3v3218090.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3218090.2 Non Characterized Hit- tr|E1ZJR8|E1ZJR8_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,43.75,0.000000000000003,seg,NULL,CUFF.30221.2
         (160 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g024190.2 | hypothetical protein | HC | chr7:7939303-79197...   263   6e-71
Medtr7g024190.1 | hypothetical protein | HC | chr7:7939374-79197...   263   6e-71
Medtr7g024190.3 | hypothetical protein | HC | chr7:7939303-79197...   162   2e-40

>Medtr7g024190.2 | hypothetical protein | HC | chr7:7939303-7919789 |
            20130731
          Length = 1193

 Score =  263 bits (671), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 133/160 (83%), Positives = 140/160 (87%)

Query: 1    MTALLQGRAIVPMQLIARVPAALLYWPXXXXXXXXXXXXXXXXXXXSKGRGNLPGATSDI 60
            M ALLQGRAIVPMQLIAR+PAALLYWP                   SKGRGNLPGATSDI
Sbjct: 1034 MAALLQGRAIVPMQLIARIPAALLYWPLIQLAGAATDDIALGVSVGSKGRGNLPGATSDI 1093

Query: 61   RAVLLLLLIGKCSADPIAFQEVGQEQFFRELLDDTDSRVAYYSSAFLLKRMMTEKPEKYQ 120
            RA+L+LLLIGKCSADP+AF+EVGQEQFFRELLDDTDSRVAYYSSAFLLKRMMTEKPEKYQ
Sbjct: 1094 RAILILLLIGKCSADPVAFKEVGQEQFFRELLDDTDSRVAYYSSAFLLKRMMTEKPEKYQ 1153

Query: 121  HMLQNLVVKAQQSNNEKLLENPYLQMRGILQLASDLGIDL 160
            HMLQNLVVKAQQSNNEKLLENPYLQMRGI+QLA+DLGIDL
Sbjct: 1154 HMLQNLVVKAQQSNNEKLLENPYLQMRGIIQLANDLGIDL 1193


>Medtr7g024190.1 | hypothetical protein | HC | chr7:7939374-7919789 |
            20130731
          Length = 1193

 Score =  263 bits (671), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 133/160 (83%), Positives = 140/160 (87%)

Query: 1    MTALLQGRAIVPMQLIARVPAALLYWPXXXXXXXXXXXXXXXXXXXSKGRGNLPGATSDI 60
            M ALLQGRAIVPMQLIAR+PAALLYWP                   SKGRGNLPGATSDI
Sbjct: 1034 MAALLQGRAIVPMQLIARIPAALLYWPLIQLAGAATDDIALGVSVGSKGRGNLPGATSDI 1093

Query: 61   RAVLLLLLIGKCSADPIAFQEVGQEQFFRELLDDTDSRVAYYSSAFLLKRMMTEKPEKYQ 120
            RA+L+LLLIGKCSADP+AF+EVGQEQFFRELLDDTDSRVAYYSSAFLLKRMMTEKPEKYQ
Sbjct: 1094 RAILILLLIGKCSADPVAFKEVGQEQFFRELLDDTDSRVAYYSSAFLLKRMMTEKPEKYQ 1153

Query: 121  HMLQNLVVKAQQSNNEKLLENPYLQMRGILQLASDLGIDL 160
            HMLQNLVVKAQQSNNEKLLENPYLQMRGI+QLA+DLGIDL
Sbjct: 1154 HMLQNLVVKAQQSNNEKLLENPYLQMRGIIQLANDLGIDL 1193


>Medtr7g024190.3 | hypothetical protein | HC | chr7:7939303-7919789 |
            20130731
          Length = 1149

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/109 (77%), Positives = 89/109 (81%)

Query: 1    MTALLQGRAIVPMQLIARVPAALLYWPXXXXXXXXXXXXXXXXXXXSKGRGNLPGATSDI 60
            M ALLQGRAIVPMQLIAR+PAALLYWP                   SKGRGNLPGATSDI
Sbjct: 1034 MAALLQGRAIVPMQLIARIPAALLYWPLIQLAGAATDDIALGVSVGSKGRGNLPGATSDI 1093

Query: 61   RAVLLLLLIGKCSADPIAFQEVGQEQFFRELLDDTDSRVAYYSSAFLLK 109
            RA+L+LLLIGKCSADP+AF+EVGQEQFFRELLDDTDSRVAYYSSAFLLK
Sbjct: 1094 RAILILLLIGKCSADPVAFKEVGQEQFFRELLDDTDSRVAYYSSAFLLK 1142