Miyakogusa Predicted Gene

Lj1g3v3194690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3194690.1 Non Characterized Hit- tr|I1KCU9|I1KCU9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40917
PE,42.5,0.000000000003, ,gene.g34257.t1.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein ...    69   1e-12

>Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr3:11452614-11442856 | 20130731
          Length = 706

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 58/120 (48%), Gaps = 36/120 (30%)

Query: 15  AGQLAFVYEGEADVSQIPQ--------------------TPKFIRDDIDTESYWISVFEM 54
           AGQ    Y+G AD S+I Q                    TPK + DD  TE  W    + 
Sbjct: 539 AGQFVAGYKGTADDSEITQWLSNIIKDGDSRDLPFFTLRTPKLVPDD--TEPIWSKTAQQ 596

Query: 55  IHNFFADSPMSVRLKSLKQSILG---ELSVYREDPRIAPALLLGALFSFSTIWLRRSQRV 111
           I            LK++KQ ILG    LSVY +DPRI P LLL AL S  TIWLRRSQ+V
Sbjct: 597 IP-----------LKNIKQHILGVIGGLSVYLDDPRIGPFLLLAALISLGTIWLRRSQQV 645