Miyakogusa Predicted Gene

Lj1g3v3170080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3170080.1 Non Characterized Hit- tr|I3SB83|I3SB83_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.49,0,seg,NULL;
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H,NULL; EUKARYOTIC
TRANSLATION INITIATI,CUFF.30143.1
         (333 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g021870.1 | eukaryotic translation initiation factor 3h | ...   624   e-179
Medtr7g064210.1 | GDP-fucose protein O-fucosyltransferase | LC |...    84   3e-16
Medtr2g022940.1 | squalene epoxidase | HC | chr2:7986164-7984237...    79   5e-15
Medtr5g030880.1 | squalene epoxidase | LC | chr5:13206513-132083...    57   2e-08
Medtr1g019930.1 | 26S proteasome non-ATPase regulatory subunit-l...    54   2e-07
Medtr2g017680.1 | 26S proteasome non-ATPase regulatory subunit-l...    54   2e-07

>Medtr7g021870.1 | eukaryotic translation initiation factor 3h | HC
           | chr7:6976764-6982516 | 20130731
          Length = 339

 Score =  624 bits (1608), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 300/334 (89%), Positives = 312/334 (93%), Gaps = 1/334 (0%)

Query: 1   MATTTA-RSFLQVAATEEVAPPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSV 59
           MATTTA RSFLQ  ATEEVA PLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSV
Sbjct: 1   MATTTATRSFLQAVATEEVATPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSV 60

Query: 60  LEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELI 119
           LEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGS+QTVELI
Sbjct: 61  LEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELI 120

Query: 120 ETFMNYQENIRRCVCIVYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSW 179
           ETFMNYQENIRRCVCI+YDPSR+DQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSW
Sbjct: 121 ETFMNYQENIRRCVCIIYDPSRADQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSW 180

Query: 180 VDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLLERNTEYLIECMDDL 239
           VDIFEEIPIKVSNSALISAFMTELEPDTPVTQCD+DRLQLSTSSL+ERN E+LIECMDDL
Sbjct: 181 VDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDFDRLQLSTSSLMERNMEFLIECMDDL 240

Query: 240 SLEQQKFQFHYXXXXXXXXXXXXXXXKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPS 299
           S+EQQKFQFHY               KRR +NMAR+AAGEEPLPEEDP+NPIFKPL EPS
Sbjct: 241 SIEQQKFQFHYRSLSRQQAQQQAWLQKRRADNMARRAAGEEPLPEEDPANPIFKPLAEPS 300

Query: 300 RLESFLITNQISNYCNQINGVSGQSFNRLYLMKA 333
           RLESFLITNQISNYCNQINGV+GQSFNRLYL+KA
Sbjct: 301 RLESFLITNQISNYCNQINGVAGQSFNRLYLLKA 334


>Medtr7g064210.1 | GDP-fucose protein O-fucosyltransferase | LC |
           chr7:23482736-23477844 | 20130731
          Length = 415

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 47/66 (71%), Gaps = 14/66 (21%)

Query: 61  EVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 120
           ++   FP  MREEDEEIEADGANYQLEMMR              YQSTLLGS+QTVELIE
Sbjct: 176 QLRAAFPQIMREEDEEIEADGANYQLEMMR--------------YQSTLLGSYQTVELIE 221

Query: 121 TFMNYQ 126
           TFMNYQ
Sbjct: 222 TFMNYQ 227


>Medtr2g022940.1 | squalene epoxidase | HC | chr2:7986164-7984237 |
           20130731
          Length = 256

 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 43/57 (75%), Gaps = 14/57 (24%)

Query: 70  MREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQ 126
           MREEDEEIEADGANYQLEMMR              Y+STLLGS+QTVELIETFMNYQ
Sbjct: 1   MREEDEEIEADGANYQLEMMR--------------YKSTLLGSYQTVELIETFMNYQ 43


>Medtr5g030880.1 | squalene epoxidase | LC | chr5:13206513-13208398
           | 20130731
          Length = 286

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 33/57 (57%), Gaps = 21/57 (36%)

Query: 70  MREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQ 126
           MREEDEEIE DGANYQLEMM                      S+QTVELIETFM YQ
Sbjct: 1   MREEDEEIEVDGANYQLEMM---------------------SSYQTVELIETFMKYQ 36


>Medtr1g019930.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr1:6086387-6082221 | 20130731
          Length = 313

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 25  VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
           V +  L +LK++KH +   P  V G +LG  V    + V + F  P       +EA    
Sbjct: 35  VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 94

Query: 84  YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
           +Q  M+  L++       VGWY S    G + +   I T  +++   +R V +V DP +S
Sbjct: 95  FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 154

Query: 143 DQGVLALKALKL 154
            +G + + A +L
Sbjct: 155 VKGKVVIDAFRL 166


>Medtr2g017680.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr2:5426885-5422810 | 20130731
          Length = 309

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 25  VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
           V +  L +LK++KH +   P  V G +LG  V    + V + F  P       +EA    
Sbjct: 31  VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 90

Query: 84  YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
           +Q  M+  L++       VGWY S    G + +   I T  +++   +R V +V DP +S
Sbjct: 91  FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 150

Query: 143 DQGVLALKALKL 154
            +G + + A +L
Sbjct: 151 VKGKVVIDAFRL 162