Miyakogusa Predicted Gene

Lj1g3v3150020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3150020.1 Non Characterized Hit- tr|I1KII4|I1KII4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,25.99,1e-16,no
description,NULL; seg,NULL; RESPONSE_REGULATORY,Signal transduction
response regulator, receiver ,CUFF.30134.1
         (360 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g032710.1 | response regulator receiver domain protein | H...    94   1e-19

>Medtr8g032710.1 | response regulator receiver domain protein | HC |
           chr8:12556796-12552678 | 20130731
          Length = 476

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 1   MESNKYQAVESGNY-SPVYGIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPIL 59
           MES+K Q+V    Y  PV G+K+LVVD +     IVS +L SLG+EV+ A+  SD L I+
Sbjct: 1   MESDKSQSVTLRRYHGPVAGVKVLVVDANSACRTIVSKMLISLGYEVMTASLASDALSII 60

Query: 60  EGTRNTINLVLVEAHLPSMEIYELSQRIDRSYPICLFLTANDAQLLASHTRALRKEASVS 119
              +N +NLVLVE  LP MEIYEL +++  S  +  F+         S +RAL   A   
Sbjct: 61  CEKKNEVNLVLVEVQLPDMEIYELIEKMGESSNLPSFIMTAYDDDTPSISRALGFGAKWC 120

Query: 120 QLIGDQVSDLRGLWRFSL 137
                Q+SDL  LWRF++
Sbjct: 121 FRKPVQISDLHDLWRFAV 138