Miyakogusa Predicted Gene

Lj1g3v3138970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3138970.1 Non Characterized Hit- tr|I1P6A0|I1P6A0_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,55.81,1e-18,seg,NULL; RING FINGER PROTEIN,NULL,CUFF.30126.1
         (419 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g021270.1 | hypothetical protein | HC | chr7:6706427-67050...   175   7e-44
Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | ...    73   6e-13
Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | ...    71   2e-12
Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | ...    71   2e-12

>Medtr7g021270.1 | hypothetical protein | HC | chr7:6706427-6705001
           | 20130731
          Length = 366

 Score =  175 bits (444), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 155/377 (41%), Positives = 177/377 (46%), Gaps = 62/377 (16%)

Query: 1   MTMVPSQNGKQI-----SNYVFYN---TSAMNQ---VETEGSYNCLLGSDFFVRHMAEEE 49
           MTMVPSQ+ KQ       +YVFYN   TSAMNQ   VE   +YN  L S+FFVR MAEEE
Sbjct: 1   MTMVPSQSSKQNYKTINGDYVFYNNNSTSAMNQFQFVEDYSTYNNCLRSEFFVRPMAEEE 60

Query: 50  XXXXXXXXXXXXXXXXNQYQNQIQPEPEAEAAGSTSKEEGEGAXXXXXXX---------- 99
                             + N+++PEPE E   STSKEE E                   
Sbjct: 61  ESSSRLNTITTT-----THHNELEPEPEGETI-STSKEEEEQEQEREANNNNINNNNNNN 114

Query: 100 -WLQLSIGFHQSQTTVPATKHNXXXXXXXXXXAGSTAAPTTGSGLVELDLLPPTERHFSR 158
            WLQLSIG     TT   TKH                 PT+ SGL+EL+LLP T    SR
Sbjct: 115 NWLQLSIGNTAVTTT---TKHGR----------DHNQTPTSSSGLLELELLP-TNWAASR 160

Query: 159 TGLESLQPTIFPVAAGRXXXXXXXXXXXXXXXXEQMTTTLLXXXXXXXXXXXXXGPTFGH 218
             LE  QP+    +                    + TT+               GPT+GH
Sbjct: 161 PNLE--QPSTRGCSNFNSSLFF------------EQTTSSSSSSSLSISMSMPSGPTYGH 206

Query: 219 HQPHQEMM--NLTFGPPQPHSMAL-MXXXXXXXXXXXXXXXXXXXXXXXXXXYYXXXXXX 275
            Q HQ ++  N  FGP  PHSMA+ M                          YY      
Sbjct: 207 QQQHQHLVPHNWAFGPLLPHSMAINMPSSTSYIPSSSLSQSCSSLRPSLGPNYYPQYHHA 266

Query: 276 XXXXX-XXXXXXGFDQLDVAGPSS--DITVRVVDPPKRPHSGIWFMLQASQNQSKEPFLP 332
                       GFDQ DVAGPSS  ++  RVVDPP+RPHSGIWFMLQASQNQ KEPFLP
Sbjct: 267 SPFHFPSSSSSSGFDQFDVAGPSSSSNVAFRVVDPPRRPHSGIWFMLQASQNQLKEPFLP 326

Query: 333 QIPKNYLRIKDGRMTVR 349
           QIPKNYLRIKDGRMTVR
Sbjct: 327 QIPKNYLRIKDGRMTVR 343


>Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:47590926-47596695 | 20130731
          Length = 428

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 2/111 (1%)

Query: 310 RPHSGIWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEI 369
           R ++ IWF L AS++Q+ E  LPQI   YLRIKDG + V                  +EI
Sbjct: 315 RKNNPIWFTLVASEDQNGEVSLPQISACYLRIKDGTVPVSYIQKYLMKKLNLASEAEVEI 374

Query: 370 TCRGQQLLPFLTLQHVRDNIWTQRDTTRPLLSD--SSTTDHVMVLHYGRAT 418
            CRGQ +LP L L ++ D  +    T++ L +   SS  D VM L Y R T
Sbjct: 375 MCRGQSVLPTLQLHNLVDLWFCTASTSKKLPASVGSSAKDFVMALSYCRKT 425


>Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588861 | 20130731
          Length = 428

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 5/108 (4%)

Query: 315 IWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITCRGQ 374
           IWF L AS+NQ  +  LPQIP +Y+RIKDG + V                  IEI C GQ
Sbjct: 319 IWFSLVASENQEGDTPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQ 378

Query: 375 QLLPFLTLQHVRDNIWTQRDTTR----PLLSDSSTTDHVMVLHYGRAT 418
            +LP LTL ++ + +W     +     P +  SS  D VMVL Y R +
Sbjct: 379 PVLPTLTLHNLVE-LWLDSTASTSHRIPAIIGSSAKDFVMVLAYARKS 425


>Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588867 | 20130731
          Length = 429

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 5/108 (4%)

Query: 315 IWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITCRGQ 374
           IWF L AS+NQ  +  LPQIP +Y+RIKDG + V                  IEI C GQ
Sbjct: 320 IWFSLVASENQEGDTPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQ 379

Query: 375 QLLPFLTLQHVRDNIWTQRDTTR----PLLSDSSTTDHVMVLHYGRAT 418
            +LP LTL ++ + +W     +     P +  SS  D VMVL Y R +
Sbjct: 380 PVLPTLTLHNLVE-LWLDSTASTSHRIPAIIGSSAKDFVMVLAYARKS 426