Miyakogusa Predicted Gene

Lj1g3v3137850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137850.1 Non Characterized Hit- tr|A9NXN9|A9NXN9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,40.6,1e-18,coiled-coil,NULL; seg,NULL; MYB_LIKE,Myb-like domain;
Myb_DNA-bind_4,NULL,CUFF.30114.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC ...   466   e-131
Medtr1g112650.1 | myb/SANT-like DNA-binding domain protein | HC ...   335   5e-92
Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC ...   316   2e-86
Medtr8g100130.1 | myb/SANT-like DNA-binding domain protein | HC ...   182   5e-46
Medtr1g094045.1 | Myb/SANT-like DNA-binding domain protein | HC ...    69   5e-12
Medtr0007s0220.1 | kinase superfamily protein | HC | scaffold000...    50   4e-06

>Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr7:6527508-6523213 | 20130731
          Length = 341

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/340 (70%), Positives = 266/340 (78%), Gaps = 20/340 (5%)

Query: 8   KPNITTVDGEIDGAVNGSPPFAAAS---DERPTARLPRWTRQEILVLIQGKADAESRFKP 64
           +PN  + DG ++G  NG+PP +A +   D +PTARLPRWTRQEILVLIQGK+DAESRFKP
Sbjct: 5   QPNPNSDDGTVNG--NGTPPSSAVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKP 62

Query: 65  GRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETE 124
           GR  GS FGSSEPKWALVSSYCKKHGVNR P+QCRKRWSNLAGDYKKIKEWES V+DETE
Sbjct: 63  GRN-GSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETE 121

Query: 125 SFWLMRNDLRRERKLPGYFDREVYX---------XXXXXXXXXXXXXXXXIEMAPEAVAR 175
           SFWLMRNDLRRERKLPGYFD+EVY                               E V  
Sbjct: 122 SFWLMRNDLRRERKLPGYFDKEVYEILDSPSMAVAAAAAVAASVVVPVNVSVSVSETVGG 181

Query: 176 EEEVHIYDSNRRVAGEDGLFSDCEKDEVLASVKSVV--APVPISEKQYLPLLRGCQVESN 233
           +EEVHIYDSNR+V+GEDGLFSD EKDEVL + K V   +PVPISEKQ+LPLLRGCQ E N
Sbjct: 182 DEEVHIYDSNRKVSGEDGLFSDFEKDEVLVANKDVHVPSPVPISEKQFLPLLRGCQGEGN 241

Query: 234 GQGTPNEKQPASNPEVGSTSQGERKRKRLATDA---AEEETLQTQLIDVLEKNGKMLRDQ 290
             GT NEKQPASNPE GSTSQGERKRKR AT+     EEE+L +QLIDVLEKNGKML +Q
Sbjct: 242 APGTNNEKQPASNPETGSTSQGERKRKRFATNGDGNEEEESLHSQLIDVLEKNGKMLSEQ 301

Query: 291 LEAQNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
           LEAQN+NFQLDRQ Q +TASSI+AVLDKLA+ALGRIADKL
Sbjct: 302 LEAQNINFQLDRQQQNETASSIVAVLDKLANALGRIADKL 341


>Medtr1g112650.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr1:50993163-50994113 | 20130731
          Length = 316

 Score =  335 bits (858), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 227/337 (67%), Gaps = 41/337 (12%)

Query: 6   PSKPNITTVDGEIDGAVNGSPPFAAASDE---RPTARLPRWTRQEILVLIQGKADAESRF 62
           PS PNI       DG  N +PP +A +D    +P  RL RWTRQEILVL+ GK DAESR 
Sbjct: 9   PSNPNIN------DGIGNETPPSSAVNDGEDVKPAGRLQRWTRQEILVLVHGKNDAESRL 62

Query: 63  KPGRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDE 122
           KPGR  GS FGS E KW LVSSYC+KHGVNR P+QC+KRW NL  DYKKIKEWES V DE
Sbjct: 63  KPGRN-GSLFGSFEKKWTLVSSYCEKHGVNRTPIQCKKRWGNLTADYKKIKEWESQVSDE 121

Query: 123 TESFWLMRNDLRRERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAPEAVAREEEVHIY 182
           TESFWLM  +LRRERKLPG FD EVY                   ++   V  +EEV+IY
Sbjct: 122 TESFWLMNVELRRERKLPGCFDIEVYNILDSAVAANAVPVAVAAPVS--EVVGDEEVYIY 179

Query: 183 DSNRRVAGEDGLFSDCEKDEVLASVKSVVAPVPI----SEKQYLPLLRGCQVESNGQGTP 238
           DSNR+V+GED LFSD EKD+      +V++PVPI    SEKQ++PLL G Q E N     
Sbjct: 180 DSNRKVSGEDELFSDLEKDD------NVLSPVPISVSVSEKQFIPLLSGLQGEGNA---I 230

Query: 239 NEKQPASNPEVGSTSQGERKRKR-LATDA----AEEETLQTQLIDVLEKNGKMLRDQLEA 293
           NEKQP           GERKRKR +AT+      EEE++Q++LI VLEKNGKML +QLEA
Sbjct: 231 NEKQP-----------GERKRKRGVATEGNIEEEEEESVQSELIKVLEKNGKMLCEQLEA 279

Query: 294 QNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
           +N + QLDRQ Q  TA+ ++AVLDKLA+ALGRIADKL
Sbjct: 280 RNKSLQLDRQQQNQTATKMVAVLDKLANALGRIADKL 316


>Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC |
           chr7:6527499-6523901 | 20130731
          Length = 245

 Score =  316 bits (809), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 163/243 (67%), Positives = 181/243 (74%), Gaps = 17/243 (6%)

Query: 8   KPNITTVDGEIDGAVNGSPPFAAAS---DERPTARLPRWTRQEILVLIQGKADAESRFKP 64
           +PN  + DG ++G  NG+PP +A +   D +PTARLPRWTRQEILVLIQGK+DAESRFKP
Sbjct: 5   QPNPNSDDGTVNG--NGTPPSSAVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKP 62

Query: 65  GRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETE 124
           GR  GS FGSSEPKWALVSSYCKKHGVNR P+QCRKRWSNLAGDYKKIKEWES V+DETE
Sbjct: 63  GRN-GSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETE 121

Query: 125 SFWLMRNDLRRERKLPGYFDREVYX---------XXXXXXXXXXXXXXXXIEMAPEAVAR 175
           SFWLMRNDLRRERKLPGYFD+EVY                               E V  
Sbjct: 122 SFWLMRNDLRRERKLPGYFDKEVYEILDSPSMAVAAAAAVAASVVVPVNVSVSVSETVGG 181

Query: 176 EEEVHIYDSNRRVAGEDGLFSDCEKDEVLASVK--SVVAPVPISEKQYLPLLRGCQVESN 233
           +EEVHIYDSNR+V+GEDGLFSD EKDEVL + K   V +PVPISEKQ+LPLLRGCQ E N
Sbjct: 182 DEEVHIYDSNRKVSGEDGLFSDFEKDEVLVANKDVHVPSPVPISEKQFLPLLRGCQGEGN 241

Query: 234 GQG 236
             G
Sbjct: 242 APG 244


>Medtr8g100130.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr8:40178053-40180864 | 20130731
          Length = 361

 Score =  182 bits (461), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 178/360 (49%), Gaps = 76/360 (21%)

Query: 24  GSPPFAAA---SDERPTA-RLPRWTRQEILVLIQGK-----ADAESRFKPGRAAGSAFGS 74
           G+ P   A   S ER  A R PRWTRQE LVLI+ K      D   R+   R++ S    
Sbjct: 25  GAQPVETAEPKSSERVKATRHPRWTRQETLVLIEAKKVIENGDQVCRY---RSSTSGLVQ 81

Query: 75  SEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETESFWLMRNDLR 134
           ++PKW LVSS C++HGV R  VQCRKRW NL  D++KIK+WES++KDE+ESFW+MRND+R
Sbjct: 82  TDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWESNIKDESESFWIMRNDVR 141

Query: 135 RERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAP--------EAVAREEEVH------ 180
           +E KLPG+FD  VY                 I+M P        E V   E+ +      
Sbjct: 142 KENKLPGFFDSVVYNVLDGGVCTAAAFPLTLIKMMPRAENGDQVEGVPALEQCNKEDENE 201

Query: 181 ------IYDSNRR-------------VAGEDGLFSDCEKDEVLASVKSVVAPVPIS---- 217
                 I DS++              +        + +K  ++  +K V  P PI+    
Sbjct: 202 EDEDEAIVDSDKMEWSTEEENNETNIMVNSPFKAPNAKKSNIVGGLK-VTPPPPITLPGS 260

Query: 218 -EKQYLPLLR-----GCQVESNGQGTPNEKQPASNPEVGSTSQGERKRKRLATDAAEEET 271
            E+   P  +     GCQ E+                    ++G  KRKRL++D +E+  
Sbjct: 261 AERPPHPFFQGNYDPGCQREA------------------LFNEG-YKRKRLSSDNSEDTA 301

Query: 272 -LQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
                +I VL +N  +L+  L AQNMN QL R  QK    S++A L +L DA+ +IADK+
Sbjct: 302 DFNEDVIKVLRRNSNILKTHLGAQNMNSQLARDQQKQQNDSLVAALGRLTDAITKIADKM 361


>Medtr1g094045.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:42235840-42238314 | 20130731
          Length = 381

 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 61/145 (42%), Gaps = 39/145 (26%)

Query: 43  WTRQEILVLIQGKA-DAESRFK---------------PGRAAGSAFGSS----------- 75
           WT QE L+LI  K  D E R +               P R   +   +S           
Sbjct: 56  WTIQETLILITAKKLDDERRLRNTSTSTSTPSSSSQDPNRTPNTTHVTSIASPSTSTSRS 115

Query: 76  --EPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWES----------SVKDET 123
             E +W  V +YC  HG  R   QC  +W NL  DYKK++++ES          S KD  
Sbjct: 116 SGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSESSPPNNNSNKDHF 175

Query: 124 ESFWLMRNDLRRERKLPGYFDREVY 148
            S+W++    R+E+ LP     EVY
Sbjct: 176 PSYWILNKQQRKEQNLPSNMVFEVY 200


>Medtr0007s0220.1 | kinase superfamily protein | HC |
           scaffold0007:149553-154087 | 20130731
          Length = 1008

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 82  VSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDET--ESFWLMRNDLRRERKL 139
           V+ +  KHGVNR+      +W N+ G+++K+ EWE   + E   +S++ +    R+  +L
Sbjct: 238 VAEFLNKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQVGKSYFRLSPYERKLHRL 297

Query: 140 PGYFDREVY 148
           P  FD EV+
Sbjct: 298 PASFDEEVF 306