Miyakogusa Predicted Gene
- Lj1g3v3137850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3137850.1 Non Characterized Hit- tr|A9NXN9|A9NXN9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,40.6,1e-18,coiled-coil,NULL; seg,NULL; MYB_LIKE,Myb-like domain;
Myb_DNA-bind_4,NULL,CUFF.30114.1
(330 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC ... 466 e-131
Medtr1g112650.1 | myb/SANT-like DNA-binding domain protein | HC ... 335 5e-92
Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC ... 316 2e-86
Medtr8g100130.1 | myb/SANT-like DNA-binding domain protein | HC ... 182 5e-46
Medtr1g094045.1 | Myb/SANT-like DNA-binding domain protein | HC ... 69 5e-12
Medtr0007s0220.1 | kinase superfamily protein | HC | scaffold000... 50 4e-06
>Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC |
chr7:6527508-6523213 | 20130731
Length = 341
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/340 (70%), Positives = 266/340 (78%), Gaps = 20/340 (5%)
Query: 8 KPNITTVDGEIDGAVNGSPPFAAAS---DERPTARLPRWTRQEILVLIQGKADAESRFKP 64
+PN + DG ++G NG+PP +A + D +PTARLPRWTRQEILVLIQGK+DAESRFKP
Sbjct: 5 QPNPNSDDGTVNG--NGTPPSSAVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKP 62
Query: 65 GRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETE 124
GR GS FGSSEPKWALVSSYCKKHGVNR P+QCRKRWSNLAGDYKKIKEWES V+DETE
Sbjct: 63 GRN-GSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETE 121
Query: 125 SFWLMRNDLRRERKLPGYFDREVYX---------XXXXXXXXXXXXXXXXIEMAPEAVAR 175
SFWLMRNDLRRERKLPGYFD+EVY E V
Sbjct: 122 SFWLMRNDLRRERKLPGYFDKEVYEILDSPSMAVAAAAAVAASVVVPVNVSVSVSETVGG 181
Query: 176 EEEVHIYDSNRRVAGEDGLFSDCEKDEVLASVKSVV--APVPISEKQYLPLLRGCQVESN 233
+EEVHIYDSNR+V+GEDGLFSD EKDEVL + K V +PVPISEKQ+LPLLRGCQ E N
Sbjct: 182 DEEVHIYDSNRKVSGEDGLFSDFEKDEVLVANKDVHVPSPVPISEKQFLPLLRGCQGEGN 241
Query: 234 GQGTPNEKQPASNPEVGSTSQGERKRKRLATDA---AEEETLQTQLIDVLEKNGKMLRDQ 290
GT NEKQPASNPE GSTSQGERKRKR AT+ EEE+L +QLIDVLEKNGKML +Q
Sbjct: 242 APGTNNEKQPASNPETGSTSQGERKRKRFATNGDGNEEEESLHSQLIDVLEKNGKMLSEQ 301
Query: 291 LEAQNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
LEAQN+NFQLDRQ Q +TASSI+AVLDKLA+ALGRIADKL
Sbjct: 302 LEAQNINFQLDRQQQNETASSIVAVLDKLANALGRIADKL 341
>Medtr1g112650.1 | myb/SANT-like DNA-binding domain protein | HC |
chr1:50993163-50994113 | 20130731
Length = 316
Score = 335 bits (858), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 193/337 (57%), Positives = 227/337 (67%), Gaps = 41/337 (12%)
Query: 6 PSKPNITTVDGEIDGAVNGSPPFAAASDE---RPTARLPRWTRQEILVLIQGKADAESRF 62
PS PNI DG N +PP +A +D +P RL RWTRQEILVL+ GK DAESR
Sbjct: 9 PSNPNIN------DGIGNETPPSSAVNDGEDVKPAGRLQRWTRQEILVLVHGKNDAESRL 62
Query: 63 KPGRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDE 122
KPGR GS FGS E KW LVSSYC+KHGVNR P+QC+KRW NL DYKKIKEWES V DE
Sbjct: 63 KPGRN-GSLFGSFEKKWTLVSSYCEKHGVNRTPIQCKKRWGNLTADYKKIKEWESQVSDE 121
Query: 123 TESFWLMRNDLRRERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAPEAVAREEEVHIY 182
TESFWLM +LRRERKLPG FD EVY ++ V +EEV+IY
Sbjct: 122 TESFWLMNVELRRERKLPGCFDIEVYNILDSAVAANAVPVAVAAPVS--EVVGDEEVYIY 179
Query: 183 DSNRRVAGEDGLFSDCEKDEVLASVKSVVAPVPI----SEKQYLPLLRGCQVESNGQGTP 238
DSNR+V+GED LFSD EKD+ +V++PVPI SEKQ++PLL G Q E N
Sbjct: 180 DSNRKVSGEDELFSDLEKDD------NVLSPVPISVSVSEKQFIPLLSGLQGEGNA---I 230
Query: 239 NEKQPASNPEVGSTSQGERKRKR-LATDA----AEEETLQTQLIDVLEKNGKMLRDQLEA 293
NEKQP GERKRKR +AT+ EEE++Q++LI VLEKNGKML +QLEA
Sbjct: 231 NEKQP-----------GERKRKRGVATEGNIEEEEEESVQSELIKVLEKNGKMLCEQLEA 279
Query: 294 QNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
+N + QLDRQ Q TA+ ++AVLDKLA+ALGRIADKL
Sbjct: 280 RNKSLQLDRQQQNQTATKMVAVLDKLANALGRIADKL 316
>Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC |
chr7:6527499-6523901 | 20130731
Length = 245
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/243 (67%), Positives = 181/243 (74%), Gaps = 17/243 (6%)
Query: 8 KPNITTVDGEIDGAVNGSPPFAAAS---DERPTARLPRWTRQEILVLIQGKADAESRFKP 64
+PN + DG ++G NG+PP +A + D +PTARLPRWTRQEILVLIQGK+DAESRFKP
Sbjct: 5 QPNPNSDDGTVNG--NGTPPSSAVNGGEDGKPTARLPRWTRQEILVLIQGKSDAESRFKP 62
Query: 65 GRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETE 124
GR GS FGSSEPKWALVSSYCKKHGVNR P+QCRKRWSNLAGDYKKIKEWES V+DETE
Sbjct: 63 GRN-GSGFGSSEPKWALVSSYCKKHGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETE 121
Query: 125 SFWLMRNDLRRERKLPGYFDREVYX---------XXXXXXXXXXXXXXXXIEMAPEAVAR 175
SFWLMRNDLRRERKLPGYFD+EVY E V
Sbjct: 122 SFWLMRNDLRRERKLPGYFDKEVYEILDSPSMAVAAAAAVAASVVVPVNVSVSVSETVGG 181
Query: 176 EEEVHIYDSNRRVAGEDGLFSDCEKDEVLASVK--SVVAPVPISEKQYLPLLRGCQVESN 233
+EEVHIYDSNR+V+GEDGLFSD EKDEVL + K V +PVPISEKQ+LPLLRGCQ E N
Sbjct: 182 DEEVHIYDSNRKVSGEDGLFSDFEKDEVLVANKDVHVPSPVPISEKQFLPLLRGCQGEGN 241
Query: 234 GQG 236
G
Sbjct: 242 APG 244
>Medtr8g100130.1 | myb/SANT-like DNA-binding domain protein | HC |
chr8:40178053-40180864 | 20130731
Length = 361
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 178/360 (49%), Gaps = 76/360 (21%)
Query: 24 GSPPFAAA---SDERPTA-RLPRWTRQEILVLIQGK-----ADAESRFKPGRAAGSAFGS 74
G+ P A S ER A R PRWTRQE LVLI+ K D R+ R++ S
Sbjct: 25 GAQPVETAEPKSSERVKATRHPRWTRQETLVLIEAKKVIENGDQVCRY---RSSTSGLVQ 81
Query: 75 SEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETESFWLMRNDLR 134
++PKW LVSS C++HGV R VQCRKRW NL D++KIK+WES++KDE+ESFW+MRND+R
Sbjct: 82 TDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWESNIKDESESFWIMRNDVR 141
Query: 135 RERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAP--------EAVAREEEVH------ 180
+E KLPG+FD VY I+M P E V E+ +
Sbjct: 142 KENKLPGFFDSVVYNVLDGGVCTAAAFPLTLIKMMPRAENGDQVEGVPALEQCNKEDENE 201
Query: 181 ------IYDSNRR-------------VAGEDGLFSDCEKDEVLASVKSVVAPVPIS---- 217
I DS++ + + +K ++ +K V P PI+
Sbjct: 202 EDEDEAIVDSDKMEWSTEEENNETNIMVNSPFKAPNAKKSNIVGGLK-VTPPPPITLPGS 260
Query: 218 -EKQYLPLLR-----GCQVESNGQGTPNEKQPASNPEVGSTSQGERKRKRLATDAAEEET 271
E+ P + GCQ E+ ++G KRKRL++D +E+
Sbjct: 261 AERPPHPFFQGNYDPGCQREA------------------LFNEG-YKRKRLSSDNSEDTA 301
Query: 272 -LQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
+I VL +N +L+ L AQNMN QL R QK S++A L +L DA+ +IADK+
Sbjct: 302 DFNEDVIKVLRRNSNILKTHLGAQNMNSQLARDQQKQQNDSLVAALGRLTDAITKIADKM 361
>Medtr1g094045.1 | Myb/SANT-like DNA-binding domain protein | HC |
chr1:42235840-42238314 | 20130731
Length = 381
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 61/145 (42%), Gaps = 39/145 (26%)
Query: 43 WTRQEILVLIQGKA-DAESRFK---------------PGRAAGSAFGSS----------- 75
WT QE L+LI K D E R + P R + +S
Sbjct: 56 WTIQETLILITAKKLDDERRLRNTSTSTSTPSSSSQDPNRTPNTTHVTSIASPSTSTSRS 115
Query: 76 --EPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWES----------SVKDET 123
E +W V +YC HG R QC +W NL DYKK++++ES S KD
Sbjct: 116 SGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSESSPPNNNSNKDHF 175
Query: 124 ESFWLMRNDLRRERKLPGYFDREVY 148
S+W++ R+E+ LP EVY
Sbjct: 176 PSYWILNKQQRKEQNLPSNMVFEVY 200
>Medtr0007s0220.1 | kinase superfamily protein | HC |
scaffold0007:149553-154087 | 20130731
Length = 1008
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 82 VSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDET--ESFWLMRNDLRRERKL 139
V+ + KHGVNR+ +W N+ G+++K+ EWE + E +S++ + R+ +L
Sbjct: 238 VAEFLNKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQVGKSYFRLSPYERKLHRL 297
Query: 140 PGYFDREVY 148
P FD EV+
Sbjct: 298 PASFDEEVF 306