Miyakogusa Predicted Gene

Lj1g3v3137750.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137750.2 tr|G7J524|G7J524_MEDTR Argininosuccinate synthase
OS=Medicago truncatula GN=MTR_3g088970 PE=3 SV=1,85.53,0,seg,NULL;
ARGININOSUCCIN_SYN_1,Argininosuccinate synthase, conserved site;
ARGININOSUCCIN_SYN_2,Argi,CUFF.30157.2
         (476 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088970.1 | argininosuccinate synthase | HC | chr3:3399005...   822   0.0  
Medtr5g042880.1 | argininosuccinate synthase | HC | chr5:1885787...   746   0.0  
Medtr4g103680.1 | argininosuccinate synthase | HC | chr4:4286963...   735   0.0  
Medtr3g088940.1 | argininosuccinate synthase | HC | chr3:3399995...   246   3e-65
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati...   133   3e-31

>Medtr3g088970.1 | argininosuccinate synthase | HC |
           chr3:33990059-33993943 | 20130731
          Length = 477

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/477 (82%), Positives = 425/477 (89%), Gaps = 1/477 (0%)

Query: 1   MAPLNAALTYSCPALAPARHAREQRFQHQFCKTNSLSSNELGPRTSVVGARKTQVIKAVL 60
           MA LNA LTYS PA+AP +HA+E    H+FC+    S  EL PR S   A K QVIKAVL
Sbjct: 1   MAQLNAILTYSSPAIAPTKHAKEHLLHHRFCQAKPSSLRELSPRRSFGAASKPQVIKAVL 60

Query: 61  -QDIQIPETKNVTSLRGKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTADXXXXXXX 119
            +D++I ETK V  L+GKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTAD       
Sbjct: 61  YKDVEISETKKVAGLKGKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTADLGQGASE 120

Query: 120 XXXXXXXXXXSGASHLVVKDLKEEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKSMV 179
                     SGAS LVVKDLKEEFVRDYVFPCLRAGA+YERKYLLGTAIARPVIAK+MV
Sbjct: 121 LEGLEEKAKASGASQLVVKDLKEEFVRDYVFPCLRAGAIYERKYLLGTAIARPVIAKAMV 180

Query: 180 DIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKH 239
           DIA EVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKH
Sbjct: 181 DIANEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKH 240

Query: 240 NVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEIGI 299
           +VPVPVTKKSIYSRDRNLWHITHEG VLEDPANEPKKDMYM+TVDPEDAPNEPEYVEIG 
Sbjct: 241 DVPVPVTKKSIYSRDRNLWHITHEGDVLEDPANEPKKDMYMLTVDPEDAPNEPEYVEIGF 300

Query: 300 ENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTILFD 359
           E G+PVS+NGK+LSPGNLVA+LNEI GRHGIGRVDLVEDRIVGMKSRGVYETPGGTILF 
Sbjct: 301 ELGIPVSLNGKRLSPGNLVAELNEIGGRHGIGRVDLVEDRIVGMKSRGVYETPGGTILFT 360

Query: 360 AVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVTLK 419
           A RDLE LTLDRETLQLKD+LALKYAELVYAGRWFDPLRES+D+FM+KI++TTTGSV+LK
Sbjct: 361 AARDLETLTLDRETLQLKDSLALKYAELVYAGRWFDPLRESMDSFMEKISQTTTGSVSLK 420

Query: 420 LYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL 476
           LYKGSA+VTGRKSPYSLYREDISSF++G++YNHADAVGFIKLYGLPMRIRAMM+QG+
Sbjct: 421 LYKGSASVTGRKSPYSLYREDISSFESGEIYNHADAVGFIKLYGLPMRIRAMMEQGI 477


>Medtr5g042880.1 | argininosuccinate synthase | HC |
           chr5:18857878-18852018 | 20130731
          Length = 480

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/477 (74%), Positives = 409/477 (85%), Gaps = 7/477 (1%)

Query: 3   PLNAALTYSCPALAPARHAREQRFQHQFCKTNSLSSNELGPRTSVVGARKTQVIKAVLQ- 61
           P +   T S P+L    H       ++F K N  S  EL PRTSV  A + QV+KAVL+ 
Sbjct: 8   PSHPCTTTSAPSLRSTEHIL---LFNRFWKANPCSYKELRPRTSV-DATRLQVVKAVLRS 63

Query: 62  --DIQIPETKNVTSLRGKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTADXXXXXXX 119
             D+++ E K  + LRGKLNKVVLAYSGGLDTSV+VPWLRENYGCDVVCFTAD       
Sbjct: 64  DTDVEVSEAKKGSGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGCDVVCFTADVGQGIKE 123

Query: 120 XXXXXXXXXXSGASHLVVKDLKEEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKSMV 179
                     SGAS LVVKDLKEEFV+DYVFPCLRAGA+YERKYLLGT++ARPVIAK+MV
Sbjct: 124 LDGLEAKAKSSGASQLVVKDLKEEFVKDYVFPCLRAGAIYERKYLLGTSMARPVIAKAMV 183

Query: 180 DIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKH 239
           D+AKEVGADAVSHGCTGKGNDQVRFEL+FFALNPKLN+VAPWREWDITGREDAIEYAKKH
Sbjct: 184 DVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNIVAPWREWDITGREDAIEYAKKH 243

Query: 240 NVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEIGI 299
           NVPVPVTKKSIYSRDRNLWH++HEG +LEDPANEPKKDMYM++VDPEDAP++ EY+EIGI
Sbjct: 244 NVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSVDPEDAPDQAEYLEIGI 303

Query: 300 ENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTILFD 359
           E+G+PVS+NGK LSP +L+A+LNEI GRHGIGR+D+VE+R+VGMKSRGVYETPGGTILF 
Sbjct: 304 ESGLPVSLNGKTLSPASLLAELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTILFA 363

Query: 360 AVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVTLK 419
           A R+LE LTLDRET+Q+KD+LALKYAELVYAGRWFDPLRES+DAFMQKITETTTGSVTLK
Sbjct: 364 AARELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRESMDAFMQKITETTTGSVTLK 423

Query: 420 LYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL 476
           LYKGS  VTGRKSP+SLYR+DISSF+  D+Y+ ADA GFI+LYGLPM++RAM++QG+
Sbjct: 424 LYKGSVTVTGRKSPFSLYRQDISSFENSDIYDQADAAGFIRLYGLPMKVRAMLEQGI 480


>Medtr4g103680.1 | argininosuccinate synthase | HC |
           chr4:42869630-42865333 | 20130731
          Length = 478

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/479 (72%), Positives = 402/479 (83%), Gaps = 4/479 (0%)

Query: 1   MAPLNAALTYSCPALAPARHAREQRFQHQFCKTNSLSSNELGPRTSVVGARKTQVIKAVL 60
           MA L A  ++ C    P+ HA E    ++    N  S  +L PR  V   R  QV+KAV 
Sbjct: 1   MAQLKAFPSHPCATPTPSLHATENILFNRVWMANPCSFKKLKPRAGVAAGR-LQVVKAVS 59

Query: 61  Q---DIQIPETKNVTSLRGKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTADXXXXX 117
               D+++ E K  + LRGKLNKVVLAYSGGLDTSV+VPWLRENYGCDVVCFTAD     
Sbjct: 60  HSDTDVEVSEAKKGSGLRGKLNKVVLAYSGGLDTSVIVPWLRENYGCDVVCFTADVGQGI 119

Query: 118 XXXXXXXXXXXXSGASHLVVKDLKEEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKS 177
                       SGAS LVVKDLKEEFV+DYVFPCLRAGA+YERKYLLGT++ARPVIAK+
Sbjct: 120 KELDGLEAKAKASGASQLVVKDLKEEFVKDYVFPCLRAGAIYERKYLLGTSMARPVIAKA 179

Query: 178 MVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 237
           MVD+AKEVGADAVSHGCTGKGNDQVRFEL+FFALNPKLN+VAPWREWDITGREDAIEYAK
Sbjct: 180 MVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNIVAPWREWDITGREDAIEYAK 239

Query: 238 KHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEI 297
           KHNVPVPVTKKSIYSRDRNLWH++HEG +LEDPANEPKKDMYM++VDPEDAP++ EY+EI
Sbjct: 240 KHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSVDPEDAPDQAEYLEI 299

Query: 298 GIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 357
           GIE+G+PVS+NGK LSP  L+A+LNEI G+HGIGR+D+VE+R+VGMKSRGVYETPGGTIL
Sbjct: 300 GIESGLPVSLNGKTLSPATLLAELNEIGGKHGIGRIDMVENRLVGMKSRGVYETPGGTIL 359

Query: 358 FDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVT 417
           F A R+LE LTLDRET+Q+KDTLALKYAELVYAGRWFDPLRES+DAFMQKIT TTTGSVT
Sbjct: 360 FKAARELESLTLDRETIQVKDTLALKYAELVYAGRWFDPLRESMDAFMQKITATTTGSVT 419

Query: 418 LKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL 476
           LKLYKGS  V G KSP+SLYR+DISSF+  ++Y+ ADA GFI+LYGLP+++RAM++QGL
Sbjct: 420 LKLYKGSVTVAGMKSPFSLYRQDISSFEGSEIYDQADAAGFIRLYGLPLKVRAMLEQGL 478


>Medtr3g088940.1 | argininosuccinate synthase | HC |
           chr3:33999955-34000628 | 20130731
          Length = 152

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 131/140 (93%)

Query: 294 YVEIGIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPG 353
           YVEIG E+G+PV+VNGK+LSPGNLVA+LNEI GRHGIG VD+VE+ IVG+KSRGVYETPG
Sbjct: 10  YVEIGFESGIPVTVNGKRLSPGNLVAELNEIGGRHGIGCVDIVENHIVGLKSRGVYETPG 69

Query: 354 GTILFDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTT 413
           GTI F A RDLE LTLDRETLQLKD+LA+KYAELVYAGRWFDPLRES+DAFM+KI+E TT
Sbjct: 70  GTIFFTAARDLESLTLDRETLQLKDSLAIKYAELVYAGRWFDPLRESMDAFMEKISEITT 129

Query: 414 GSVTLKLYKGSAAVTGRKSP 433
           GSV+LKLYKGSA+VTGRKSP
Sbjct: 130 GSVSLKLYKGSASVTGRKSP 149


>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
           | HC | chr3:33997007-33999751 | 20130731
          Length = 579

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 65/69 (94%), Gaps = 1/69 (1%)

Query: 225 DITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVD 284
           DITGREDAIEYAKKHNVP+P+TKKSIYSRDRNLWHI H G VLED ANEPKKD+YM+TVD
Sbjct: 512 DITGREDAIEYAKKHNVPIPITKKSIYSRDRNLWHINH-GDVLEDSANEPKKDIYMLTVD 570

Query: 285 PEDAPNEPE 293
           PEDAPN+P+
Sbjct: 571 PEDAPNQPD 579