Miyakogusa Predicted Gene

Lj1g3v3137750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137750.1 tr|G7J524|G7J524_MEDTR Argininosuccinate synthase
OS=Medicago truncatula GN=MTR_3g088970 PE=3 SV=1,90.64,0,argG:
argininosuccinate synthase,Argininosuccinate synthase;
ARGININOSUCCIN_SYN_2,Argininosuccinate ,CUFF.30157.1
         (299 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088970.1 | argininosuccinate synthase | HC | chr3:3399005...   578   e-165
Medtr5g042880.1 | argininosuccinate synthase | HC | chr5:1885787...   546   e-156
Medtr4g103680.1 | argininosuccinate synthase | HC | chr4:4286963...   537   e-153
Medtr3g088940.1 | argininosuccinate synthase | HC | chr3:3399995...   245   4e-65
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati...   132   3e-31

>Medtr3g088970.1 | argininosuccinate synthase | HC |
           chr3:33990059-33993943 | 20130731
          Length = 477

 Score =  578 bits (1489), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 271/299 (90%), Positives = 291/299 (97%)

Query: 1   MVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 60
           MVDIA EVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK
Sbjct: 179 MVDIANEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 238

Query: 61  KHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEI 120
           KH+VPVPVTKKSIYSRDRNLWHITHEG VLEDPANEPKKDMYM+TVDPEDAPNEPEYVEI
Sbjct: 239 KHDVPVPVTKKSIYSRDRNLWHITHEGDVLEDPANEPKKDMYMLTVDPEDAPNEPEYVEI 298

Query: 121 GIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 180
           G E G+PVS+NGK+LSPGNLVA+LNEI GRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL
Sbjct: 299 GFELGIPVSLNGKRLSPGNLVAELNEIGGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 358

Query: 181 FDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVT 240
           F A RDLE LTLDRETLQLKD+LALKYAELVYAGRWFDPLRES+D+FM+KI++TTTGSV+
Sbjct: 359 FTAARDLETLTLDRETLQLKDSLALKYAELVYAGRWFDPLRESMDSFMEKISQTTTGSVS 418

Query: 241 LKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL 299
           LKLYKGSA+VTGRKSPYSLYREDISSF++G++YNHADAVGFIKLYGLPMRIRAMM+QG+
Sbjct: 419 LKLYKGSASVTGRKSPYSLYREDISSFESGEIYNHADAVGFIKLYGLPMRIRAMMEQGI 477


>Medtr5g042880.1 | argininosuccinate synthase | HC |
           chr5:18857878-18852018 | 20130731
          Length = 480

 Score =  546 bits (1407), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 248/299 (82%), Positives = 285/299 (95%)

Query: 1   MVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 60
           MVD+AKEVGADAVSHGCTGKGNDQVRFEL+FFALNPKLN+VAPWREWDITGREDAIEYAK
Sbjct: 182 MVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNIVAPWREWDITGREDAIEYAK 241

Query: 61  KHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEI 120
           KHNVPVPVTKKSIYSRDRNLWH++HEG +LEDPANEPKKDMYM++VDPEDAP++ EY+EI
Sbjct: 242 KHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSVDPEDAPDQAEYLEI 301

Query: 121 GIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 180
           GIE+G+PVS+NGK LSP +L+A+LNEI GRHGIGR+D+VE+R+VGMKSRGVYETPGGTIL
Sbjct: 302 GIESGLPVSLNGKTLSPASLLAELNEIGGRHGIGRIDMVENRLVGMKSRGVYETPGGTIL 361

Query: 181 FDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVT 240
           F A R+LE LTLDRET+Q+KD+LALKYAELVYAGRWFDPLRES+DAFMQKITETTTGSVT
Sbjct: 362 FAAARELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRESMDAFMQKITETTTGSVT 421

Query: 241 LKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL 299
           LKLYKGS  VTGRKSP+SLYR+DISSF+  D+Y+ ADA GFI+LYGLPM++RAM++QG+
Sbjct: 422 LKLYKGSVTVTGRKSPFSLYRQDISSFENSDIYDQADAAGFIRLYGLPMKVRAMLEQGI 480


>Medtr4g103680.1 | argininosuccinate synthase | HC |
           chr4:42869630-42865333 | 20130731
          Length = 478

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 244/299 (81%), Positives = 281/299 (93%)

Query: 1   MVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 60
           MVD+AKEVGADAVSHGCTGKGNDQVRFEL+FFALNPKLN+VAPWREWDITGREDAIEYAK
Sbjct: 180 MVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNIVAPWREWDITGREDAIEYAK 239

Query: 61  KHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEI 120
           KHNVPVPVTKKSIYSRDRNLWH++HEG +LEDPANEPKKDMYM++VDPEDAP++ EY+EI
Sbjct: 240 KHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYMMSVDPEDAPDQAEYLEI 299

Query: 121 GIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 180
           GIE+G+PVS+NGK LSP  L+A+LNEI G+HGIGR+D+VE+R+VGMKSRGVYETPGGTIL
Sbjct: 300 GIESGLPVSLNGKTLSPATLLAELNEIGGKHGIGRIDMVENRLVGMKSRGVYETPGGTIL 359

Query: 181 FDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVT 240
           F A R+LE LTLDRET+Q+KDTLALKYAELVYAGRWFDPLRES+DAFMQKIT TTTGSVT
Sbjct: 360 FKAARELESLTLDRETIQVKDTLALKYAELVYAGRWFDPLRESMDAFMQKITATTTGSVT 419

Query: 241 LKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL 299
           LKLYKGS  V G KSP+SLYR+DISSF+  ++Y+ ADA GFI+LYGLP+++RAM++QGL
Sbjct: 420 LKLYKGSVTVAGMKSPFSLYRQDISSFEGSEIYDQADAAGFIRLYGLPLKVRAMLEQGL 478


>Medtr3g088940.1 | argininosuccinate synthase | HC |
           chr3:33999955-34000628 | 20130731
          Length = 152

 Score =  245 bits (626), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 131/140 (93%)

Query: 117 YVEIGIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPG 176
           YVEIG E+G+PV+VNGK+LSPGNLVA+LNEI GRHGIG VD+VE+ IVG+KSRGVYETPG
Sbjct: 10  YVEIGFESGIPVTVNGKRLSPGNLVAELNEIGGRHGIGCVDIVENHIVGLKSRGVYETPG 69

Query: 177 GTILFDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTT 236
           GTI F A RDLE LTLDRETLQLKD+LA+KYAELVYAGRWFDPLRES+DAFM+KI+E TT
Sbjct: 70  GTIFFTAARDLESLTLDRETLQLKDSLAIKYAELVYAGRWFDPLRESMDAFMEKISEITT 129

Query: 237 GSVTLKLYKGSAAVTGRKSP 256
           GSV+LKLYKGSA+VTGRKSP
Sbjct: 130 GSVSLKLYKGSASVTGRKSP 149


>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
           | HC | chr3:33997007-33999751 | 20130731
          Length = 579

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 65/69 (94%), Gaps = 1/69 (1%)

Query: 48  DITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVD 107
           DITGREDAIEYAKKHNVP+P+TKKSIYSRDRNLWHI H G VLED ANEPKKD+YM+TVD
Sbjct: 512 DITGREDAIEYAKKHNVPIPITKKSIYSRDRNLWHINH-GDVLEDSANEPKKDIYMLTVD 570

Query: 108 PEDAPNEPE 116
           PEDAPN+P+
Sbjct: 571 PEDAPNQPD 579