Miyakogusa Predicted Gene
- Lj1g3v3116530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3116530.1 Non Characterized Hit- tr|A2WVG1|A2WVG1_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,29.02,6e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; coiled-coil,NULL,CUFF.30110.1
(619 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g018610.2 | nuclear matrix constituent-like protein | HC |... 785 0.0
Medtr7g018610.1 | nuclear matrix constituent-like protein | HC |... 785 0.0
Medtr6g015285.1 | nuclear matrix constituent-like protein, putat... 270 3e-72
Medtr6g015285.2 | nuclear matrix constituent-like protein, putat... 270 4e-72
Medtr4g097580.1 | nuclear matrix constituent-like protein, putat... 88 2e-17
>Medtr7g018610.2 | nuclear matrix constituent-like protein | HC |
chr7:6071525-6078643 | 20130731
Length = 1175
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/610 (69%), Positives = 475/610 (77%), Gaps = 20/610 (3%)
Query: 22 IESEREELLSLKAEVEKIKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQY 81
IESEREELLSLK+EVEK++A +VTEEERSEY+RLQSQLKHEIDQY
Sbjct: 437 IESEREELLSLKSEVEKLRANNEEELLRIKEETNRLQVTEEERSEYIRLQSQLKHEIDQY 496
Query: 82 RLQKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKL 141
R QKELL+KEADDLRQQKETFEREWDELDLKRADVEKELKNV+QQKEEI KLQQ EEE+L
Sbjct: 497 RQQKELLMKEADDLRQQKETFEREWDELDLKRADVEKELKNVLQQKEEILKLQQNEEERL 556
Query: 142 KNEKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEA 201
K EK ATEDY+QRELETL+LAKESFA E+EL+KSSLAEKAQNEKNQ+LLDFE+R+ ELEA
Sbjct: 557 KKEKQATEDYLQRELETLQLAKESFAAEMELEKSSLAEKAQNEKNQLLLDFEMRRKELEA 616
Query: 202 DMQNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQETD 261
DMQNQLEQKEKDL E R LFEEKRESEL+NINFLR+VANR MEEMK QRSKLE+EKQ+ D
Sbjct: 617 DMQNQLEQKEKDLFESRRLFEEKRESELNNINFLREVANRGMEEMKHQRSKLEREKQDAD 676
Query: 262 ENKKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISE 321
EN+KH+ERQR EMQEDI QREQFI+ER RFI+ V+KL+SCQNCGEMISE
Sbjct: 677 ENRKHVERQRIEMQEDIDVLVDLNKKLKSQREQFIVERRRFIDVVEKLQSCQNCGEMISE 736
Query: 322 FVLSNLQSSADIENLEVPSLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPKSPVSGGTI 381
FVLS+LQSSADIENLEVPSLPKL GD+ QGGS+VNL SSRQ TG PATD KSPV GGT+
Sbjct: 737 FVLSDLQSSADIENLEVPSLPKLVGDITQGGSDVNLDSSRQNTGASPATDTKSPVPGGTV 796
Query: 382 SWLRKCTSKILKISPIRKIESEDVSGSRDEATLFSEKADIEDPAGGIPGNENEVELSFAI 441
SWLRKCTSKI KISPI+KIES DV R TL +K + ED +PG ENE ELSFAI
Sbjct: 797 SWLRKCTSKIFKISPIKKIES-DVDNLRSVDTLPFDKTN-EDLPANVPGTENEAELSFAI 854
Query: 442 VNDYFDARMLQSGNDI--AEVEANHDPSIDNQSNIDVSKAPEDVQPSDSKVEKQKPXXXX 499
+D FD +QSGNDI EVEA+H+PSID Q NID + A + +QP +SK +QKP
Sbjct: 855 ADDSFDVPRVQSGNDITDTEVEADHEPSIDKQGNIDAT-ATDYLQPPNSKAGQQKPRRGG 913
Query: 500 X-XXXVKRTQTVKAVLEEAKAILGESNAAEVVPGESN-----------AEDSANVISESQ 547
VKRTQTVKAV++EA+A LGES AAE VPGES AEDSAN+ SESQ
Sbjct: 914 GVRARVKRTQTVKAVIKEAEAFLGESKAAEAVPGESVDDRETDFPNGIAEDSANMDSESQ 973
Query: 548 KPSNTRRPANVRKRNRVQTSQVTASGHDGDASEGHSDSLVLGXXXXXXXXXXXPPVQISR 607
KP +R AN+RKRNR+Q+SQVTASGH+ D SEGHSD + G PP Q +
Sbjct: 974 KPPE-KRTANLRKRNRIQSSQVTASGHEDDPSEGHSD--IPGRPKRRRQKAAAPPAQSAG 1030
Query: 608 ETRYNLRRPK 617
ETRYNLRRPK
Sbjct: 1031 ETRYNLRRPK 1040
>Medtr7g018610.1 | nuclear matrix constituent-like protein | HC |
chr7:6071545-6078552 | 20130731
Length = 1177
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/610 (69%), Positives = 475/610 (77%), Gaps = 20/610 (3%)
Query: 22 IESEREELLSLKAEVEKIKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQY 81
IESEREELLSLK+EVEK++A +VTEEERSEY+RLQSQLKHEIDQY
Sbjct: 437 IESEREELLSLKSEVEKLRANNEEELLRIKEETNRLQVTEEERSEYIRLQSQLKHEIDQY 496
Query: 82 RLQKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKL 141
R QKELL+KEADDLRQQKETFEREWDELDLKRADVEKELKNV+QQKEEI KLQQ EEE+L
Sbjct: 497 RQQKELLMKEADDLRQQKETFEREWDELDLKRADVEKELKNVLQQKEEILKLQQNEEERL 556
Query: 142 KNEKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEA 201
K EK ATEDY+QRELETL+LAKESFA E+EL+KSSLAEKAQNEKNQ+LLDFE+R+ ELEA
Sbjct: 557 KKEKQATEDYLQRELETLQLAKESFAAEMELEKSSLAEKAQNEKNQLLLDFEMRRKELEA 616
Query: 202 DMQNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQETD 261
DMQNQLEQKEKDL E R LFEEKRESEL+NINFLR+VANR MEEMK QRSKLE+EKQ+ D
Sbjct: 617 DMQNQLEQKEKDLFESRRLFEEKRESELNNINFLREVANRGMEEMKHQRSKLEREKQDAD 676
Query: 262 ENKKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISE 321
EN+KH+ERQR EMQEDI QREQFI+ER RFI+ V+KL+SCQNCGEMISE
Sbjct: 677 ENRKHVERQRIEMQEDIDVLVDLNKKLKSQREQFIVERRRFIDVVEKLQSCQNCGEMISE 736
Query: 322 FVLSNLQSSADIENLEVPSLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPKSPVSGGTI 381
FVLS+LQSSADIENLEVPSLPKL GD+ QGGS+VNL SSRQ TG PATD KSPV GGT+
Sbjct: 737 FVLSDLQSSADIENLEVPSLPKLVGDITQGGSDVNLDSSRQNTGASPATDTKSPVPGGTV 796
Query: 382 SWLRKCTSKILKISPIRKIESEDVSGSRDEATLFSEKADIEDPAGGIPGNENEVELSFAI 441
SWLRKCTSKI KISPI+KIES DV R TL +K + ED +PG ENE ELSFAI
Sbjct: 797 SWLRKCTSKIFKISPIKKIES-DVDNLRSVDTLPFDKTN-EDLPANVPGTENEAELSFAI 854
Query: 442 VNDYFDARMLQSGNDI--AEVEANHDPSIDNQSNIDVSKAPEDVQPSDSKVEKQKPXXXX 499
+D FD +QSGNDI EVEA+H+PSID Q NID + A + +QP +SK +QKP
Sbjct: 855 ADDSFDVPRVQSGNDITDTEVEADHEPSIDKQGNIDAT-ATDYLQPPNSKAGQQKPRRGG 913
Query: 500 X-XXXVKRTQTVKAVLEEAKAILGESNAAEVVPGESN-----------AEDSANVISESQ 547
VKRTQTVKAV++EA+A LGES AAE VPGES AEDSAN+ SESQ
Sbjct: 914 GVRARVKRTQTVKAVIKEAEAFLGESKAAEAVPGESVDDRETDFPNGIAEDSANMDSESQ 973
Query: 548 KPSNTRRPANVRKRNRVQTSQVTASGHDGDASEGHSDSLVLGXXXXXXXXXXXPPVQISR 607
KP +R AN+RKRNR+Q+SQVTASGH+ D SEGHSD + G PP Q +
Sbjct: 974 KPPE-KRTANLRKRNRIQSSQVTASGHEDDPSEGHSD--IPGRPKRRRQKAAAPPAQSAG 1030
Query: 608 ETRYNLRRPK 617
ETRYNLRRPK
Sbjct: 1031 ETRYNLRRPK 1040
>Medtr6g015285.1 | nuclear matrix constituent-like protein, putative |
HC | chr6:4963958-4955360 | 20130731
Length = 1203
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 211/607 (34%), Positives = 338/607 (55%), Gaps = 37/607 (6%)
Query: 24 SEREELLSLKAEVEKIKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRL 83
++R L +L E+EKIKA K+ ++ERSE+ RLQ +LK EI+ R+
Sbjct: 481 ADRRSLENLNDELEKIKAEISQQKLQISQETENLKLIQDERSEHSRLQLELKQEIEHTRM 540
Query: 84 QKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKN 143
QK+L++KEA++LR+++ FE+EW+ELD KRA++ E + V ++KE++ KL+ EEE+LK
Sbjct: 541 QKDLIMKEAENLREERLRFEKEWEELDKKRAEINGEQQEVEKEKEKLRKLKNSEEERLKR 600
Query: 144 EKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADM 203
EK ED +++ELE L+L K+SF+ I+ ++ L+EK +NEK QM+ DFE + LE ++
Sbjct: 601 EKQDMEDNLKKELEKLELDKKSFSDSIKQEEFLLSEKVKNEKAQMVQDFEWKTRNLENEI 660
Query: 204 QNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQETDEN 263
Q + E+ EKDL +R F+E+ E EL+NIN L+D A +E EE+K + +LE E++E + N
Sbjct: 661 QKRKEEMEKDLQQRERKFQEEMEKELNNINILKDAAEKEWEEVKSEGIRLENERKELETN 720
Query: 264 KKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFV 323
K+ L+ + EM ED +RE+ + ER+ F+ V+KLR+C++CGE++ + V
Sbjct: 721 KQQLKSDQREMHEDSEMLMNLSQKVKKERERLVAERNHFLALVEKLRNCKDCGEVVRDVV 780
Query: 324 LSNLQ--SSADIENLEVPSLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPKSPVSGGTI 381
+S+LQ S + L +P+ P ++ + +AS +G K PV
Sbjct: 781 VSDLQLPDSKECGVLPLPTSP------LENSKDNVIASGSNHSG------SKWPV----- 823
Query: 382 SWLRKCTSKILKISP---IRKIESEDVSGSRDEATLFSEKADIEDPAGGIPGNEN----- 433
S RKCTSKI +SP I + +++G+ E+ + + +P P E
Sbjct: 824 SVFRKCTSKIFSLSPSTNTDSIGTSNIAGTSPESDVNVNIEKVGEPVSS-PNIEGPIVAL 882
Query: 434 -EVELSFAIVNDYFDARMLQSGNDIAEVEANHDPSIDNQSNID--VSKAPEDVQPSDSKV 490
E +++ + D LQS N E + SID S ++ P+D Q S KV
Sbjct: 883 QERQIADGVAFHSSDTAHLQSDNIAREGNTEYSLSIDEHSYMESLTGGGPDDSQQSVPKV 942
Query: 491 EKQKPXXXXXXXXVKRTQTVKAVLEEAKAILGESNAAEVVPGESNAEDSANVISESQKPS 550
+Q+P + RT++VKAV++EA+ LG++ +++ + + E+S S ++K +
Sbjct: 943 GRQRP-GRKSKSGIARTRSVKAVVKEAREFLGKT-SSQNLDTDYIKENSHEESSHTEKAT 1000
Query: 551 NTRRPANVRKRNRVQTSQVTASGHDGDASEGHSDSLVLGXXXXXXXXXXXPPVQISRETR 610
+ RKR R QTS++ + SEGHSDS G P Q++ E R
Sbjct: 1001 GN----STRKRQRAQTSKIAEGEQNAADSEGHSDSSTAGGRKKKRSTVAPPTTQVTGEKR 1056
Query: 611 YNLRRPK 617
YNLRR K
Sbjct: 1057 YNLRRHK 1063
>Medtr6g015285.2 | nuclear matrix constituent-like protein, putative |
HC | chr6:4963958-4958128 | 20130731
Length = 1064
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 211/607 (34%), Positives = 338/607 (55%), Gaps = 37/607 (6%)
Query: 24 SEREELLSLKAEVEKIKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRL 83
++R L +L E+EKIKA K+ ++ERSE+ RLQ +LK EI+ R+
Sbjct: 481 ADRRSLENLNDELEKIKAEISQQKLQISQETENLKLIQDERSEHSRLQLELKQEIEHTRM 540
Query: 84 QKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKN 143
QK+L++KEA++LR+++ FE+EW+ELD KRA++ E + V ++KE++ KL+ EEE+LK
Sbjct: 541 QKDLIMKEAENLREERLRFEKEWEELDKKRAEINGEQQEVEKEKEKLRKLKNSEEERLKR 600
Query: 144 EKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADM 203
EK ED +++ELE L+L K+SF+ I+ ++ L+EK +NEK QM+ DFE + LE ++
Sbjct: 601 EKQDMEDNLKKELEKLELDKKSFSDSIKQEEFLLSEKVKNEKAQMVQDFEWKTRNLENEI 660
Query: 204 QNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQETDEN 263
Q + E+ EKDL +R F+E+ E EL+NIN L+D A +E EE+K + +LE E++E + N
Sbjct: 661 QKRKEEMEKDLQQRERKFQEEMEKELNNINILKDAAEKEWEEVKSEGIRLENERKELETN 720
Query: 264 KKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFV 323
K+ L+ + EM ED +RE+ + ER+ F+ V+KLR+C++CGE++ + V
Sbjct: 721 KQQLKSDQREMHEDSEMLMNLSQKVKKERERLVAERNHFLALVEKLRNCKDCGEVVRDVV 780
Query: 324 LSNLQ--SSADIENLEVPSLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPKSPVSGGTI 381
+S+LQ S + L +P+ P ++ + +AS +G K PV
Sbjct: 781 VSDLQLPDSKECGVLPLPTSP------LENSKDNVIASGSNHSG------SKWPV----- 823
Query: 382 SWLRKCTSKILKISP---IRKIESEDVSGSRDEATLFSEKADIEDPAGGIPGNEN----- 433
S RKCTSKI +SP I + +++G+ E+ + + +P P E
Sbjct: 824 SVFRKCTSKIFSLSPSTNTDSIGTSNIAGTSPESDVNVNIEKVGEPVSS-PNIEGPIVAL 882
Query: 434 -EVELSFAIVNDYFDARMLQSGNDIAEVEANHDPSIDNQSNID--VSKAPEDVQPSDSKV 490
E +++ + D LQS N E + SID S ++ P+D Q S KV
Sbjct: 883 QERQIADGVAFHSSDTAHLQSDNIAREGNTEYSLSIDEHSYMESLTGGGPDDSQQSVPKV 942
Query: 491 EKQKPXXXXXXXXVKRTQTVKAVLEEAKAILGESNAAEVVPGESNAEDSANVISESQKPS 550
+Q+P + RT++VKAV++EA+ LG++ +++ + + E+S S ++K +
Sbjct: 943 GRQRP-GRKSKSGIARTRSVKAVVKEAREFLGKT-SSQNLDTDYIKENSHEESSHTEKAT 1000
Query: 551 NTRRPANVRKRNRVQTSQVTASGHDGDASEGHSDSLVLGXXXXXXXXXXXPPVQISRETR 610
+ RKR R QTS++ + SEGHSDS G P Q++ E R
Sbjct: 1001 GN----STRKRQRAQTSKIAEGEQNAADSEGHSDSSTAGGRKKKRSTVAPPTTQVTGEKR 1056
Query: 611 YNLRRPK 617
YNLRR K
Sbjct: 1057 YNLRRHK 1063
>Medtr4g097580.1 | nuclear matrix constituent-like protein, putative
| HC | chr4:40269238-40262512 | 20130731
Length = 1055
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 161/336 (47%), Gaps = 15/336 (4%)
Query: 73 QLKHEIDQYRLQKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFK 132
+LK EID R Q LL +AD L+ +K FE EW+ LD K+ ++ KE + + +++ +
Sbjct: 492 KLKEEIDLVRSQNLELLAQADKLKAEKAKFEVEWELLDEKKEELRKEAEFIENERKAVST 551
Query: 133 LQQFEEEKLKNEKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDF 192
+ E +KL+ EK +L L +E+F ++ + + K Q E+ D
Sbjct: 552 FVKNERDKLREEKENLRKQYTHDLGLLASERENFMKKMAHEHAEWFGKMQQERADFQRDI 611
Query: 193 ELRKNELEADMQNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSK 252
E++K EL ++ + E+ E L ER FEE++ EL +I+ L++ A +E+E++ L+ +
Sbjct: 612 EMQKRELNNLIEKRREEVESYLKERETTFEEEKNRELQHIDALKEKAAKELEQVSLEMKR 671
Query: 253 LEKEKQETDENKKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSC 312
L+ E+ E + ++ ++ E+ I QRE +R ++L+
Sbjct: 672 LQTERTEINLDRDLRNKEWAELTNCIKELEVQRDKLQKQRELLHADRINIYSKTEELKKL 731
Query: 313 QNCGEMISE--FVLSNLQSSADIENLEVPSLPKLAGDVIQGGSEVNLASSRQM------- 363
++ +++S+ ++ L+S + ++ S L + G V L+S + +
Sbjct: 732 ED-SKVVSDDLAIVEMLKSDMEYNQQKISSRKNLKHQTLTQG--VRLSSCKDVDVDNIDN 788
Query: 364 ---TGVPPATDPKSPVSGGTISWLRKCTSKILKISP 396
T + SP S SW+++CT I + SP
Sbjct: 789 GFDTPFVQKSSGVSPASAARFSWIKRCTELIFRNSP 824