Miyakogusa Predicted Gene

Lj1g3v3105090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3105090.1 tr|A9SNZ9|A9SNZ9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_230348,31.42,2e-17,seg,NULL; BETA-MANNOSIDASE,NULL;
BETA-GALACTOSIDASE,NULL,gene.g34145.t1.1
         (397 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g082890.1 | endo-beta-mannosidase-like mannosylglycoprotei...   385   e-107
Medtr7g113570.1 | endo-beta-mannosidase-like mannosylglycoprotei...   385   e-107

>Medtr1g082890.1 | endo-beta-mannosidase-like mannosylglycoprotein |
           HC | chr1:36885460-36890999 | 20130731
          Length = 966

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/344 (59%), Positives = 249/344 (72%), Gaps = 24/344 (6%)

Query: 65  VASTIRATMPSEGWKIPVFKKLSNGYVKEVPNPIWEYHKYIPYSNPDNSDKVHDQIQLYG 124
           +A+ I+     EGW   ++ K +   + +  NP W   +   Y      D +HDQ   + 
Sbjct: 636 LANFIQYRALLEGWTSRMWSKYTGVLIWKTQNP-WTGLRGQFY------DHLHDQTAGFY 688

Query: 125 DAK----------DLDDFCLKVVNTTSEPLSDLAIEVSVWDLEGTRPYYKVRENLFLLPK 174
             +          +LD + ++V+NTTSE LS++A+EVSVWDLEGT PYYK  EN+  LPK
Sbjct: 689 GCRIAAEPIHVQLNLDTYFIEVINTTSEELSNVAVEVSVWDLEGTSPYYKTHENISFLPK 748

Query: 175 KVAPVGQMNYPKSKNPKPVYFLLLKLYDMSDHRIISRNFYWLHLSGGDYKLLEPYRTKKI 234
           KV P+ +M YPKSKNPKPVYFLLLKLY+ SD+RI+SRNFYWLHL GGDYKLLEPYR KKI
Sbjct: 749 KVTPIAEMKYPKSKNPKPVYFLLLKLYNKSDNRILSRNFYWLHLPGGDYKLLEPYRKKKI 808

Query: 235 PLKITTKVLLEESTYNIQVHVTNTSKRPDSESSTFEHSSRAMLDSMETVHAGAAKEHDSG 294
           PLKIT++V +E STY +Q+HV NTSK PDS+S T E  S    +S ETVH GA KE D G
Sbjct: 809 PLKITSEVFIEGSTYKLQMHVHNTSKIPDSKSLTSECGS----NSPETVHNGAGKEQDVG 864

Query: 295 WFKRIIHRCFAGKS-DGLKVCEIDGHDVGVAFFLHFSVHTSKKDYKEGEDTRILPVHYSD 353
           WFK+ IH+ FAGKS DGLKV EI+GHD+GVAFFLHFSVH S +D+KEGEDTRILPVHYSD
Sbjct: 865 WFKK-IHKHFAGKSDDGLKVSEINGHDIGVAFFLHFSVHASSRDHKEGEDTRILPVHYSD 923

Query: 354 NYFSLVPGETMPVNISFDVPQGVTPRVVLHGWNYEGGQTILEVV 397
           NYFSLVPGET  + ISF+ PQGV PRV L+GWNY  GQTI E +
Sbjct: 924 NYFSLVPGETTTIKISFEAPQGVAPRVTLNGWNYH-GQTIHEAL 966



 Score =  211 bits (538), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 100/135 (74%), Positives = 111/135 (82%), Gaps = 3/135 (2%)

Query: 2   LRDPSQYLDGTRIYVQGSMWDGFADGMGNFTDGPYQIQYPEXXXXXXXXXXGFNPEVGSV 61
           L DPSQYLDGTRIY++GS+W GFADG G FTDGPY+IQ PE          GFNPEVGSV
Sbjct: 503 LGDPSQYLDGTRIYIEGSLWSGFADGKGGFTDGPYEIQNPEDFFKDSFYKHGFNPEVGSV 562

Query: 62  GMPVASTIRATMPSEGWKIPVFKKLSNGYVKEVPNPIWEYHKYIPYSNPDNSDKVHDQIQ 121
           G+PVA+TIRATMPSEGW+IP+FKK SNGYV+EVPNPIW+YHKYIPYS P    KVHDQ+Q
Sbjct: 563 GIPVAATIRATMPSEGWQIPLFKKDSNGYVEEVPNPIWKYHKYIPYSKP---TKVHDQLQ 619

Query: 122 LYGDAKDLDDFCLKV 136
           LYG  KDLDDFCLK 
Sbjct: 620 LYGAVKDLDDFCLKA 634


>Medtr7g113570.1 | endo-beta-mannosidase-like mannosylglycoprotein |
           HC | chr7:46804463-46797327 | 20130731
          Length = 966

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/271 (70%), Positives = 224/271 (82%), Gaps = 9/271 (3%)

Query: 128 DLDDFCLKVVNTTSEPLSDLAIEVSVWDLEGTRPYYKVRENLFLLPKKVAPVGQMNYPKS 187
           +L  + ++VVNTTSE LS++A+E SVWDLEGTRPYYKV ENL LLPKKVAP+ +M YP+S
Sbjct: 704 NLATYFIEVVNTTSEELSNVAVEASVWDLEGTRPYYKVHENLSLLPKKVAPIVEMKYPES 763

Query: 188 KNPKPVYFLLLKLYDMSDHRIISRNFYWLHLSGGDYKLLEPYRTKKIPLKITTKVLLEES 247
           KNPKPVYFLLL+LY+MSDH+IISRNFYW H SGGDY LLEPYR KKIPLKIT+K+ ++ES
Sbjct: 764 KNPKPVYFLLLRLYNMSDHKIISRNFYWFHPSGGDYSLLEPYRKKKIPLKITSKISVDES 823

Query: 248 TYNIQVHVTNTSKRPDSESSTFEHSSRAMLDSMETVHAGAAKEHDSGWFKRIIHRCFAGK 307
           TYNIQV+VTNTS++ +S+     +SS A          G  KE ++GWF R I RCFAGK
Sbjct: 824 TYNIQVNVTNTSEKSNSKIPMLGYSSTASA-------CGVGKEDETGWFNR-IQRCFAGK 875

Query: 308 SDGLKVCEIDGHDVGVAFFLHFSVHTSKKDYKEGEDTRILPVHYSDNYFSLVPGETMPVN 367
           +DGLK  EI+G DVGVAFFLH SVH SK +YKEGEDTRILPVHYSDNYFSLVPGE+MPVN
Sbjct: 876 NDGLKFSEINGDDVGVAFFLHLSVHASKTEYKEGEDTRILPVHYSDNYFSLVPGESMPVN 935

Query: 368 ISFDVPQGVTPRVVLHGWNYEG-GQTILEVV 397
           ISF+VPQGVTPRV L GWNY+G  Q+ILE+V
Sbjct: 936 ISFEVPQGVTPRVTLDGWNYDGRQQSILEIV 966



 Score =  229 bits (585), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 108/136 (79%), Positives = 116/136 (85%), Gaps = 3/136 (2%)

Query: 1   MLRDPSQYLDGTRIYVQGSMWDGFADGMGNFTDGPYQIQYPEXXXXXXXXXXGFNPEVGS 60
           +LRDPSQYLDGTR+Y+QGSMWDGFADGMGNFTDGPY+IQ PE          GFNPEVGS
Sbjct: 504 VLRDPSQYLDGTRVYIQGSMWDGFADGMGNFTDGPYEIQNPEDFFKDNFYDYGFNPEVGS 563

Query: 61  VGMPVASTIRATMPSEGWKIPVFKKLSNGYVKEVPNPIWEYHKYIPYSNPDNSDKVHDQI 120
           VGMPVASTIRATMP EGW+IPVFKKL NGYV+EVPNPIWEYHKYIPYS P   +KVHDQI
Sbjct: 564 VGMPVASTIRATMPPEGWQIPVFKKLPNGYVEEVPNPIWEYHKYIPYSKP---NKVHDQI 620

Query: 121 QLYGDAKDLDDFCLKV 136
           QLYG  +DLDDFCLK 
Sbjct: 621 QLYGTVRDLDDFCLKA 636