Miyakogusa Predicted Gene

Lj1g3v3103940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3103940.1 tr|G7KSU9|G7KSU9_MEDTR Protein YIF1B-B
OS=Medicago truncatula GN=MTR_7g020800 PE=4 SV=1,85.39,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; YIP1 INTERACTING FACTOR HOMOLOG (YIF1
PROTEIN),Hrf1; YIF1,Hrf1,CUFF.30054.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g020800.1 | integral membrane HRF1 family protein | HC | c...   385   e-107
Medtr7g020800.2 | integral membrane HRF1 family protein | HC | c...   385   e-107
Medtr6g016655.1 | integral membrane HRF1 family protein | HC | c...   379   e-105

>Medtr7g020800.1 | integral membrane HRF1 family protein | HC |
           chr7:6477697-6482396 | 20130731
          Length = 273

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/267 (72%), Positives = 212/267 (79%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MYNNVRPQLG+             NV G+AFN               EKIFGSSS+YVQS
Sbjct: 1   MYNNVRPQLGVPQFQPQLPTSSQPNVFGNAFNAAGSGLIRGGLGAYGEKIFGSSSEYVQS 60

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NI+RYFSDPQYYFQVN HYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NITRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYV+LAGISLG  GKFSPEALNWLFIKG++GW MQTALLK TL+ LGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGMVGWCMQTALLKLTLLSLGSGE 180

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+V+YAGY F G+ LA LG+I+ GYSYY+LMPW CLCMG+FLVKTMKRVLFAEVRS
Sbjct: 181 APLLDIVAYAGYTFAGMSLAALGKIISGYSYYVLMPWFCLCMGIFLVKTMKRVLFAEVRS 240

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+             WLGNI
Sbjct: 241 YDSSKHHYLLLFIALAQFPLFMWLGNI 267


>Medtr7g020800.2 | integral membrane HRF1 family protein | HC |
           chr7:6477697-6482396 | 20130731
          Length = 273

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/267 (72%), Positives = 212/267 (79%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MYNNVRPQLG+             NV G+AFN               EKIFGSSS+YVQS
Sbjct: 1   MYNNVRPQLGVPQFQPQLPTSSQPNVFGNAFNAAGSGLIRGGLGAYGEKIFGSSSEYVQS 60

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NI+RYFSDPQYYFQVN HYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NITRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYV+LAGISLG  GKFSPEALNWLFIKG++GW MQTALLK TL+ LGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGMVGWCMQTALLKLTLLSLGSGE 180

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+V+YAGY F G+ LA LG+I+ GYSYY+LMPW CLCMG+FLVKTMKRVLFAEVRS
Sbjct: 181 APLLDIVAYAGYTFAGMSLAALGKIISGYSYYVLMPWFCLCMGIFLVKTMKRVLFAEVRS 240

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+             WLGNI
Sbjct: 241 YDSSKHHYLLLFIALAQFPLFMWLGNI 267


>Medtr6g016655.1 | integral membrane HRF1 family protein | HC |
           chr6:6365578-6362098 | 20130731
          Length = 269

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/267 (71%), Positives = 206/267 (77%), Gaps = 4/267 (1%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MYNNV  Q G+             N  GSAF                 KI GSSS+YVQS
Sbjct: 1   MYNNVGSQPGVVQPPTNTQP----NPFGSAFQVAGSGLIRGGLGAYGGKILGSSSEYVQS 56

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN HYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 57  NISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 116

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYV+LAG+SLG HGKFSPEALN LFIKGL+GW MQ ALLK TL+ LGSGE
Sbjct: 117 DLYIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQAALLKVTLLSLGSGE 176

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+++YAGY F G+CLAV+GRI+ GYSYY LMPWTCLCMGVFLVKTMKRVLFAEVRS
Sbjct: 177 APLLDIIAYAGYTFTGICLAVIGRIISGYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRS 236

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+             WLGNI
Sbjct: 237 YDSSKHHYLLLFIALVQFPLFIWLGNI 263