Miyakogusa Predicted Gene

Lj1g3v3101600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3101600.1 CUFF.30037.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0542s0020.1 | transmembrane protein, putative | HC | scaffo...   103   4e-23
Medtr7g018090.1 | transmembrane protein, putative | HC | chr7:58...    66   7e-12
Medtr6g016480.1 | transmembrane protein, putative | HC | chr6:61...    56   7e-09
Medtr1g013410.1 | transmembrane protein | HC | chr1:3429558-3429...    53   8e-08
Medtr3g105690.2 | transmembrane protein | HC | chr3:48748919-487...    52   1e-07
Medtr3g105690.1 | transmembrane protein | HC | chr3:48748919-487...    52   1e-07
Medtr1g013430.1 | glutamine dumper, putative | HC | chr1:3426014...    52   1e-07
Medtr4g129020.1 | transmembrane protein | HC | chr4:53701685-537...    51   3e-07
Medtr4g110130.1 | transmembrane protein, putative | HC | chr4:45...    49   7e-07

>Medtr0542s0020.1 | transmembrane protein, putative | HC |
           scaffold0542:7687-6926 | 20130731
          Length = 135

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 87/135 (64%), Gaps = 10/135 (7%)

Query: 1   MRPINSVPSSPSSTI--HGVKFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSS 58
           MRPIN++ SS ++T   + +K W+SPIPYLFGG                CSY+KR S S 
Sbjct: 1   MRPINTLSSSSTTTTQTNEIKIWQSPIPYLFGGLAIMLILISVALVILVCSYKKRGSSSQ 60

Query: 59  SDSA-EDMKQVMSK----TNSEPEVLVIMAGDNKPTYLAKPITPSN---YCTCGGAEPTT 110
           S ++ E+MKQVMSK     NSEPEVLVIMAG++KPTY+AKPI  +    YCTCGG   +T
Sbjct: 61  SSNSDEEMKQVMSKNIEKINSEPEVLVIMAGEDKPTYIAKPIIITTSLPYCTCGGESTST 120

Query: 111 TLASNSTTEQRVLTN 125
           T +S  T E+  LTN
Sbjct: 121 TSSSTLTNEEITLTN 135


>Medtr7g018090.1 | transmembrane protein, putative | HC |
           chr7:5809435-5808832 | 20130731
          Length = 113

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 5   NSVPSSPSSTIHGVKFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSDSAED 64
           NS  +  SS    ++   SPIPYLFGG                CS+RK+ S S+S + E+
Sbjct: 10  NSTMNKSSSETASLRNLSSPIPYLFGGIALVLGVIAIALLIIACSFRKQYSSSTSTNDEE 69

Query: 65  ----MKQV-MSKTNSEPEVLVIMAGDNKPTYLAKPIT 96
               M  V M + + EP+++VIMAG++ PTYLAKP++
Sbjct: 70  KSSNMHVVDMDQVSLEPKIVVIMAGESNPTYLAKPVS 106


>Medtr6g016480.1 | transmembrane protein, putative | HC |
          chr6:6191471-6192322 | 20130731
          Length = 98

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 17 GVKFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSDSAE--DMKQVMSKTNS 74
          G K   SP PYLFGG                C+ ++    +++   E  D K V    + 
Sbjct: 8  GFKNVTSPTPYLFGGLALMLAIIAFALIILACTCQENSLSTNAGGYEEKDTKNVEMVVDL 67

Query: 75 EPEVLVIMAGDNKPTYLAKPIT 96
          EP+++VIMAGD  PTYLAKP++
Sbjct: 68 EPKIVVIMAGDTNPTYLAKPLS 89


>Medtr1g013410.1 | transmembrane protein | HC | chr1:3429558-3429068
           | 20130731
          Length = 140

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 20  FWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSDSAEDMKQVMSKTNS----- 74
            W +PIPYLFGG                CS+ K   ++      D+    S   +     
Sbjct: 24  LWHTPIPYLFGGLAAIMGLIALALLALACSFCKLSRNNQDGDHNDLDNKESDPQTKEPIK 83

Query: 75  --EPEVLVIMAGDNKPTYLAKPI 95
             E +VLVIMAG+ KPT+LA P+
Sbjct: 84  SYEEKVLVIMAGNEKPTFLATPV 106


>Medtr3g105690.2 | transmembrane protein | HC |
           chr3:48748919-48750711 | 20130731
          Length = 164

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 51/127 (40%), Gaps = 22/127 (17%)

Query: 8   PSSPSSTIHGVKFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSDSAEDMKQ 67
           PSS +S ++    W SPIPYLFGG                CSY  R +    D   +   
Sbjct: 16  PSSTASMMNHSS-WHSPIPYLFGGLAAMLGLIAFALLILACSYW-RLTGQLLDEENNSNN 73

Query: 68  VMSKTNSEPE-------------VLVIMAGDNKPTYLAKPITPSNYCTCGGAEPTTTLAS 114
              +   E E             VLVIMAGD  PT+LA P+ P        +     L +
Sbjct: 74  RNMENEKEGENSNKESVKVYEEKVLVIMAGDQNPTFLATPVFPK-------SSSVMNLDA 126

Query: 115 NSTTEQR 121
           N + EQR
Sbjct: 127 NHSDEQR 133


>Medtr3g105690.1 | transmembrane protein | HC |
           chr3:48748919-48749898 | 20130731
          Length = 157

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 21  WESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSDSAEDMKQVMSKTNSEPE--- 77
           W SPIPYLFGG                CSY  R +    D   +      +   E E   
Sbjct: 28  WHSPIPYLFGGLAAMLGLIAFALLILACSYW-RLTGQLLDEENNSNNRNMENEKEGENSN 86

Query: 78  ----------VLVIMAGDNKPTYLAKPITPSNYCTCGGAEPTTTLASNSTTEQR 121
                     VLVIMAGD  PT+LA P+ P        +     L +N + EQR
Sbjct: 87  KESVKVYEEKVLVIMAGDQNPTFLATPVFPK-------SSSVMNLDANHSDEQR 133


>Medtr1g013430.1 | glutamine dumper, putative | HC |
           chr1:3426014-3425527 | 20130731
          Length = 141

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 20  FWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSD--SAEDMKQVMSKTNS--- 74
            W +P+PYLFGG                CSY +   D+  +  SA D K+   +T     
Sbjct: 24  LWHTPMPYLFGGLAAIIGLIALALLVLACSYCRLSRDNQDEDHSALDNKESDPQTKKPVK 83

Query: 75  --EPEVLVIMAGDNKPTYLAKPITPS 98
             E  +LVIMAG+  PT+LA P+  S
Sbjct: 84  VYEENILVIMAGNENPTFLATPVVLS 109


>Medtr4g129020.1 | transmembrane protein | HC |
           chr4:53701685-53700391 | 20130731
          Length = 174

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 3   PINS-VPSSPSSTIHGVKFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPS--DSSS 59
           PI+S VP SP         W SP+PYLFGG                CSY K     + + 
Sbjct: 15  PISSQVPHSP---------WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNG 65

Query: 60  DSAEDMKQVMSKTNS-----EPEVLVIMAGDNKPTYLA 92
           +S  D++      ++     E ++LVIMAG +KPT+LA
Sbjct: 66  ESERDLEAGERNNDTDQKPYEEKILVIMAGQDKPTFLA 103


>Medtr4g110130.1 | transmembrane protein, putative | HC |
           chr4:45897609-45896536 | 20130731
          Length = 130

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)

Query: 21  WESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSS-----DSAEDMKQVMSKTNSE 75
           W S   +L+GG                CS   RP    S     DS +   + +++ + E
Sbjct: 44  WNSSAAFLYGGLAPIFIIIGVALLTVACSRCLRPEIDHSPMTSIDSNKSRGETITEVDLE 103

Query: 76  PEVLVIMAGDNKPTYLAKPITPSNYCT 102
           P +LVI+AG+N PT+LAK   PSN+ T
Sbjct: 104 PNILVIVAGENHPTHLAK---PSNHIT 127