Miyakogusa Predicted Gene

Lj1g3v3090460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3090460.1 Non Characterized Hit- tr|B8B1N8|B8B1N8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,45.45,0.0000000000002,seg,NULL,CUFF.30023.1
         (506 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028030.1 | rRNA processing/ribosome biogenesis protein | ...   477   e-134
Medtr3g075460.1 | rRNA processing/ribosome biogenesis protein | ...   466   e-131

>Medtr8g028030.1 | rRNA processing/ribosome biogenesis protein | HC
           | chr8:10367089-10377430 | 20130731
          Length = 864

 Score =  477 bits (1227), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 290/551 (52%), Positives = 356/551 (64%), Gaps = 51/551 (9%)

Query: 3   SVSTLMFSCCTMLTSSYPVQVNVPVPSILALVERILMVNGSLPQMSFPFMTSTQQENICS 62
           +V  LM  CC +LT++YPV+VNVPV  +L LVERIL VNG+LP MS PFMT+ QQE ICS
Sbjct: 318 NVPILMSGCCMLLTNTYPVKVNVPVRLLLVLVERILTVNGALPAMSLPFMTARQQERICS 377

Query: 63  ELPVLHLSSMELLMAALKGSGSQLLPHAASIARIITQYFKTCALPELRIKVYSVTKTLLI 122
           ELP LH+ S+ELL A +K +GSQLLPHAASI R IT+YFK CALP+LRIKVYS+ KTLLI
Sbjct: 378 ELPALHMCSLELLTAIIKATGSQLLPHAASIVRFITKYFKACALPDLRIKVYSIAKTLLI 437

Query: 123 SMGVGIAMYLEQEVVNNAIADLSTIENKNGVTLNCSNSGVSIGVPPPTNHRKRKHISKAG 182
           SMGVG+A+ L +EVVNNAIADLST+E KNG  LN SN+ VS   P P ++RKRKH S  G
Sbjct: 438 SMGVGMALCLSKEVVNNAIADLSTVEKKNGGMLNGSNTEVSTIAPLPASNRKRKHSSTNG 497

Query: 183 SLQEHVESAGLGVKDPKNRPLTPISLRIAALEAIGALLSVAGALRSEWWRSNVDRLLMVI 242
           S+QE+    GLGV+ P   P+TPISLR+AALEA+ AL++VAGAL+SE WRS VD LL+VI
Sbjct: 498 SVQEYDAGGGLGVEVPNKCPVTPISLRVAALEALEALITVAGALKSEQWRSKVDSLLIVI 557

Query: 243 AIDSFKEGPSSEEISVLQQKDPXXXXXXXXXXXXXXXXXXXXXXXRVRPPYISQGLPLFR 302
           A+DSFKEG S EEI+V Q+KD                          RPPY+SQGL LF+
Sbjct: 558 AMDSFKEGSSREEINVFQKKDHAATATDLQFAALRALLASFLSVS--RPPYLSQGLELFQ 615

Query: 303 RGKQQTGTKLAEFCAHALLTLEVLIHPRALPLLNYDCAINN---EAQRNIQDEYGSWNSS 359
           RGKQQTGTKLAEFCAHA+LTLEVLIHPRALPL++Y    N+   EAQ +   EY S N  
Sbjct: 616 RGKQQTGTKLAEFCAHAMLTLEVLIHPRALPLVDYVPPNNDNFGEAQFSFGHEYASRN-- 673

Query: 360 STAFGLPQTALPDYYDDLYARWLETGNN-------------------GAHVPLA---KER 397
            T FGLPQT  P+  ++L+A +L  G++                      +P +   +ER
Sbjct: 674 HTTFGLPQTEPPESVNNLFADYLANGDDEMGGLWTENTKKTKVSSEMATSLPSSANIQER 733

Query: 398 SEMAPETAAGKDVEMRTEGDAFVFMA---GNSTVLFQEPVPCTASI-------LDTGTHF 447
           SEM PE A   DVEMRT  +     +   G S V FQEPV CT SI        D  T  
Sbjct: 734 SEMVPEIATRADVEMRTVENETTMKSDHPGESVVQFQEPVHCTTSIPAAIDIHSDAATDK 793

Query: 448 SSERVVFDSTMPKSNSS----------LQGTSDSTRTRDFAFKLDYGCS--VTEDHPFPA 495
             ER+V +S +  + ++             +SD+   +   FKLDYG S    +D PFP 
Sbjct: 794 EPERIVSESAIAHNEANHVESASQSKSSAQSSDTNMLQQVEFKLDYGNSVDDDDDDPFPD 853

Query: 496 IVDADPDTDSE 506
           IVD DP++DSE
Sbjct: 854 IVDGDPNSDSE 864


>Medtr3g075460.1 | rRNA processing/ribosome biogenesis protein | HC
           | chr3:34364829-34352574 | 20130731
          Length = 862

 Score =  466 bits (1200), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/530 (52%), Positives = 339/530 (63%), Gaps = 48/530 (9%)

Query: 2   SSVSTLMFSCCTMLTSSYPVQVNVPVPSILALVERILMVNGSLPQMSFPFMTSTQQENIC 61
           S+VS LM  CC +LT++YPV+VNVPV  +L LVERILMVNG+LP+MS PFMT  QQEN+C
Sbjct: 317 SNVSLLMSGCCMLLTNTYPVKVNVPVRLLLVLVERILMVNGALPEMSLPFMTGRQQENVC 376

Query: 62  SELPVLHLSSMELLMAALKGSGSQLLPHAASIARIITQYFKTCALPELRIKVYSVTKTLL 121
           SELPVLH+ S+ELL A +K +GSQLLPHAASI R IT+YFKTCAL ELRIK+YS+ K LL
Sbjct: 377 SELPVLHMCSLELLAAIIKATGSQLLPHAASIVRFITKYFKTCALSELRIKIYSIAKILL 436

Query: 122 ISMGVGIAMYLEQEVVNNAIADLSTIENKNGVTLNCSNSGVSIGVPPPTNHRKRKHISKA 181
           ISMGVG+A+ L +EVVNNAIADLSTIE KNG   N SN+  S   P P + +KRKH S  
Sbjct: 437 ISMGVGMALCLSKEVVNNAIADLSTIEKKNGGMSNGSNTDASTVAPLPASSKKRKHSSTT 496

Query: 182 GSLQEHVESAGLGVKDPKNRPLTPISLRIAALEAIGALLSVAGALRSEWWRSNVDRLLMV 241
           GSLQE+    GLGV+ PK   + PISLR+AALE + AL++VAGAL+SE WRS VD LL+V
Sbjct: 497 GSLQEYDAGGGLGVEVPKKCTVAPISLRVAALETLEALITVAGALKSEQWRSKVDSLLIV 556

Query: 242 IAIDSFKEGPSSEEISVLQQKDPXXXXXXXXXXXXXXXXXXXXXXXRVRPPYISQGLPLF 301
           IA+DS +EG SSEEI+V Q+K+                          RPPY+SQGL LF
Sbjct: 557 IAMDSLREGSSSEEINVFQKKELTATAADLQLAALRALLASFLSVP--RPPYLSQGLELF 614

Query: 302 RRGKQQTGTKLAEFCAHALLTLEVLIHPRALPLLNYDCAINN---EAQRNIQDEYGSWNS 358
           RRGKQQTGTKLAEFCAHA+LTLEVLIHPRALPL++Y    NN   E   N +DE  S N 
Sbjct: 615 RRGKQQTGTKLAEFCAHAMLTLEVLIHPRALPLVDYVPPNNNTYDEVHFNFRDECVSRN- 673

Query: 359 SSTAFGLPQTALPDYYDDLYARWLETGNNG-----------------AHVPL-----AKE 396
            +T FGL QT  PD  ++++A +L  G++                     PL      +E
Sbjct: 674 HTTPFGLHQTEPPDGVNNMFADYLANGDDDMGGLWKENMKDAKKSSEMATPLPSSADIQE 733

Query: 397 RSEMAPETAAGKDVEMRTEGDAFVFMA---GNSTVLFQEPVPCTAS---IL----DTGTH 446
           RSEM  ET    DVEMRT  +  V  +   G S   FQEP  CT S   ++    D  T 
Sbjct: 734 RSEMVTETTTCADVEMRTVENETVSKSDNPGESVTHFQEPATCTTSNPAVIDIRGDAATI 793

Query: 447 FSSERVVFDSTMPKSNSS----------LQGTSDSTRTRDFAFKLDYGCS 486
             +ER+V DS +  + +              +SD+   + FAFKLDYG S
Sbjct: 794 TEAERIVSDSAIAHNEAKHVELASQSRSSAQSSDTNMLQQFAFKLDYGNS 843