Miyakogusa Predicted Gene

Lj1g3v3089430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3089430.1 tr|I1N4T1|I1N4T1_SOYBN DNA-directed RNA
polymerase (Fragment) OS=Glycine max PE=3
SV=1,81.11,0,RNA_POL_PHAGE_2,DNA-directed RNA polymerase, phage-type;
RNA_POL_PHAGE_1,DNA-directed RNA polymerase,CUFF.30026.1
         (727 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g065900.1 | DNA-directed RNA polymerase-like protein | HC ...  1069   0.0  
Medtr7g017440.1 | leguminosin group485 secreted peptide | HC | c...   949   0.0  

>Medtr8g065900.1 | DNA-directed RNA polymerase-like protein | HC |
           chr8:27401434-27394114 | 20130731
          Length = 727

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/669 (74%), Positives = 578/669 (86%), Gaps = 1/669 (0%)

Query: 48  AGESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLM 107
           A E+    KE+++LR KV  L+KKQK     GI+K ++  KPWG   + KVGSRL++LL+
Sbjct: 30  AEENEKLAKEEKRLRNKVASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGSRLIQLLI 89

Query: 108 QTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKN 167
           +TAY++PP+++  DG PDI PAF H+ +T++ ++    R++G+IECDP+I KGL+++A+N
Sbjct: 90  ETAYLEPPANKFGDGGPDIFPAFKHTLKTISNDSNNGSRRYGVIECDPMIQKGLEKTARN 149

Query: 168 MVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDT 227
           MVIPYMPMLVPP NW GYDKG +LFLPSYVMR HG KQQR+A+K APK QL+ +FEAL+T
Sbjct: 150 MVIPYMPMLVPPNNWIGYDKGAYLFLPSYVMRIHGAKQQRDALKWAPKNQLDSIFEALNT 209

Query: 228 LGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXX 287
           LG+TKWRVNK VL V+D+IWA+GGR+ADLVDRDD+PLPEE DT+DE++I           
Sbjct: 210 LGNTKWRVNKSVLGVIDQIWANGGRVADLVDRDDLPLPEELDTEDESEIRKWKWKVKNVK 269

Query: 288 XENRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGIL 347
            EN ER+SQRCDIELKLAVARK+K+E+ FYYPHN+DFRGRAYPMHP+LNHLGSD+CRGIL
Sbjct: 270 KENNERHSQRCDIELKLAVARKLKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 329

Query: 348 EFADGRPLGKSGRQWLKIHLANLYA-GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRR 406
           EFA+GRPLGK G QWLKIHLANLYA GGVDKLS +GRV+FTE H+DDIFDSAD+PLEG+R
Sbjct: 330 EFAEGRPLGKKGLQWLKIHLANLYATGGVDKLSYDGRVAFTEDHLDDIFDSADRPLEGKR 389

Query: 407 WWLNAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAA 466
           WWL AEDPFQCLA CI L+EALRS +PE  +SH+PVHQDGSCNGLQHYAALGRDKLGA+A
Sbjct: 390 WWLQAEDPFQCLAACINLSEALRSPNPEATLSHMPVHQDGSCNGLQHYAALGRDKLGASA 449

Query: 467 VNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTS 526
           VNLV G+KPADVYSGIAARVL IM+ DA KDPA  P ALHAR L+NQVDRKLVKQTVMTS
Sbjct: 450 VNLVGGDKPADVYSGIAARVLQIMKRDALKDPATDPHALHARRLINQVDRKLVKQTVMTS 509

Query: 527 VYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGE 586
           VYGVTYIGAR+QIKRRLKER    DD++LF ASCYAAK TLTALEEMF+ ARSIM WLG+
Sbjct: 510 VYGVTYIGARDQIKRRLKERCAVEDDSELFAASCYAAKTTLTALEEMFEAARSIMGWLGD 569

Query: 587 CAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFP 646
           CAKVIA  NQ VRW TPLGLPVVQPYR++GRH+IKTSLQ+LTLQRETDKVMVKRQRTAFP
Sbjct: 570 CAKVIACTNQAVRWVTPLGLPVVQPYREVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 629

Query: 647 PNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPIL 706
           PNFVHSLDGSHMMMTAVACKQAG+ FAGVHDSYWTHACDV++MNRILR KFVELYETPIL
Sbjct: 630 PNFVHSLDGSHMMMTAVACKQAGMNFAGVHDSYWTHACDVEEMNRILREKFVELYETPIL 689

Query: 707 ENLLEGFQK 715
           ENLLE F+K
Sbjct: 690 ENLLENFEK 698


>Medtr7g017440.1 | leguminosin group485 secreted peptide | HC |
           chr7:5556630-5564677 | 20130731
          Length = 566

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/536 (83%), Positives = 489/536 (91%)

Query: 180 VNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKV 239
            ++  +DKGG+LFLPSYVMRTHGVKQQREAVK+ P+KQLEPVFEALDTLG+TKWRVN KV
Sbjct: 2   THFCSFDKGGYLFLPSYVMRTHGVKQQREAVKKVPRKQLEPVFEALDTLGNTKWRVNNKV 61

Query: 240 LSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCD 299
           LSVVDRIWA GGRLA LVDR+DV +PEE ++DDEA+             ENRERYS RCD
Sbjct: 62  LSVVDRIWAGGGRLAGLVDRNDVEIPEELESDDEAEKKKWKWKVKSVKKENRERYSLRCD 121

Query: 300 IELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSG 359
            ELKLAVARKMKDEE FYYPHN+DFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSG
Sbjct: 122 TELKLAVARKMKDEECFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSG 181

Query: 360 RQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLA 419
             WLKIHLANLY GGVDKLS EGR++F E+H+D+IFDSA++P+EGRRWWLNAEDPFQ LA
Sbjct: 182 LHWLKIHLANLYGGGVDKLSNEGRITFVENHLDEIFDSAEQPMEGRRWWLNAEDPFQFLA 241

Query: 420 VCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 479
            C+TLTEAL+ S+PE+FISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY
Sbjct: 242 ACMTLTEALKISTPESFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 301

Query: 480 SGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQI 539
           SGIAARVL IM+ DAQKDP  F +A HA+ LVNQVDRKLVKQTVMTSVYGVTYIGAREQI
Sbjct: 302 SGIAARVLAIMKIDAQKDPETFSEARHAKILVNQVDRKLVKQTVMTSVYGVTYIGAREQI 361

Query: 540 KRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVR 599
           KRRLKERD  +DD++LFGA+CYAAKVTLTAL+EMF+GARSIMNWLG+CAKVIASEN+PV 
Sbjct: 362 KRRLKERDAIADDSELFGAACYAAKVTLTALQEMFEGARSIMNWLGDCAKVIASENEPVC 421

Query: 600 WTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMM 659
           WTTPLGLPVVQPYR  GRHI+KTSLQMLTL+RETDKVMVKRQRTAFPPNFVHSLDGSHMM
Sbjct: 422 WTTPLGLPVVQPYRYQGRHIVKTSLQMLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMM 481

Query: 660 MTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
           MTA+ACK+AGL+FAGVHDSYWTHACDVD+MNRILR KFVELYETPILENLLE FQ+
Sbjct: 482 MTAIACKKAGLSFAGVHDSYWTHACDVDNMNRILREKFVELYETPILENLLESFQE 537