Miyakogusa Predicted Gene

Lj1g3v3063920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3063920.1 Non Characterized Hit- tr|C0PTE0|C0PTE0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,33.14,0.00000000007,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.29985.1
         (333 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g016950.1 | pollen protein Ole E I-like protein | HC | chr...   163   3e-40
Medtr6g015995.1 | pollen Ole e I family allergens | HC | chr6:56...   112   4e-25

>Medtr7g016950.1 | pollen protein Ole E I-like protein | HC |
           chr7:5358846-5361469 | 20130731
          Length = 465

 Score =  163 bits (412), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 83/109 (76%), Positives = 96/109 (88%)

Query: 20  LCAGASVAVECKDGDGSSNSSFKKEVKTDEHGKFRVHLPFSVSKHVKRIKRCSVKLISSS 79
             +GASV VECKDG+  S   FKK+VKT+EHG+F++ LPFSVSKHVKRIK C VKL+SS+
Sbjct: 56  FISGASVEVECKDGNEISKPRFKKQVKTNEHGEFKIQLPFSVSKHVKRIKGCVVKLVSSN 115

Query: 80  EPYCAVASAATSSSLHLKSRKQGLHIFSAGFFSFKPLKQPTLCNQKPRV 128
           EP+C++ASAA+SSSLHLKSRKQGLHIFSAGFFSFKPLKQP LCNQKP V
Sbjct: 116 EPFCSIASAASSSSLHLKSRKQGLHIFSAGFFSFKPLKQPNLCNQKPSV 164


>Medtr6g015995.1 | pollen Ole e I family allergens | HC |
           chr6:5684113-5686084 | 20130731
          Length = 346

 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 82/110 (74%), Gaps = 2/110 (1%)

Query: 20  LCAGASVAVECKDGDGSSNSSFKKEVKTDEHGKFRVHLPFSVSKHVKRIKRCSVKLISSS 79
             +GAS+AVECK G   +   F KEVKT+EHG+F+V LPF V KHVKRIK C+ KL+SS+
Sbjct: 54  FISGASIAVECKIGK--TKPRFYKEVKTNEHGEFKVKLPFLVKKHVKRIKGCNFKLLSSN 111

Query: 80  EPYCAVASAATSSSLHLKSRKQGLHIFSAGFFSFKPLKQPTLCNQKPRVQ 129
           EP CA+AS +TSSSL LK + Q  HIFSAG FSFKP+K+P  C++K  + 
Sbjct: 112 EPNCAIASTSTSSSLSLKKKLQQEHIFSAGIFSFKPIKKPKFCDKKHSIH 161