Miyakogusa Predicted Gene

Lj1g3v3063910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3063910.1 CUFF.29984.1
         (360 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g016950.1 | pollen protein Ole E I-like protein | HC | chr...   243   2e-64
Medtr6g015995.1 | pollen Ole e I family allergens | HC | chr6:56...   191   8e-49
Medtr7g027020.1 | RALF related | HC | chr7:9138594-9140162 | 201...    63   5e-10
Medtr2g016020.1 | pollen Ole e I family allergens | HC | chr2:48...    55   1e-07
Medtr7g405770.1 | Lipid transfer protein | HC | chr7:249512-2482...    52   1e-06

>Medtr7g016950.1 | pollen protein Ole E I-like protein | HC |
           chr7:5358846-5361469 | 20130731
          Length = 465

 Score =  243 bits (620), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/164 (76%), Positives = 142/164 (86%), Gaps = 5/164 (3%)

Query: 1   MSWFLVVLFLSLTFGNPTEA-----IHDKKPPSAVVVGTVYCDTCFQQDFSMGSHFISGA 55
           MSWFLV+LFL +TFG  +EA      H KKP SAVVVGTVYCDTCFQQDFSMG+HFISGA
Sbjct: 1   MSWFLVILFLIVTFGTFSEASHHHHHHHKKPLSAVVVGTVYCDTCFQQDFSMGNHFISGA 60

Query: 56  SVAVECKDGDGSSNSSFKKEVKTDEHGKFRVHLPFSVSKHVKRIKRCSVKLISSSEPYCA 115
           SV VECKDG+  S   FKK+VKT+EHG+F++ LPFSVSKHVKRIK C VKL+SS+EP+C+
Sbjct: 61  SVEVECKDGNEISKPRFKKQVKTNEHGEFKIQLPFSVSKHVKRIKGCVVKLVSSNEPFCS 120

Query: 116 VASAATSSSLHLKSRKQGLHIFSAGFFSFKPLKQPTLCNQKPRV 159
           +ASAA+SSSLHLKSRKQGLHIFSAGFFSFKPLKQP LCNQKP V
Sbjct: 121 IASAASSSSLHLKSRKQGLHIFSAGFFSFKPLKQPNLCNQKPSV 164


>Medtr6g015995.1 | pollen Ole e I family allergens | HC |
           chr6:5684113-5686084 | 20130731
          Length = 346

 Score =  191 bits (486), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 107/159 (67%), Positives = 125/159 (78%), Gaps = 5/159 (3%)

Query: 1   MSWFLVVLFLSLTFG-NPTEAIHDKKP--PSAVVVGTVYCDTCFQQDFSMGSHFISGASV 57
           MSWFL +LFLSLTFG N +EA HD K   PS VVVGTVYCDTCFQQ FS+ SHFISGAS+
Sbjct: 1   MSWFLTILFLSLTFGTNFSEANHDNKKLLPSPVVVGTVYCDTCFQQAFSLNSHFISGASI 60

Query: 58  AVECKDGDGSSNSSFKKEVKTDEHGKFRVHLPFSVSKHVKRIKRCSVKLISSSEPYCAVA 117
           AVECK G   +   F KEVKT+EHG+F+V LPF V KHVKRIK C+ KL+SS+EP CA+A
Sbjct: 61  AVECKIGK--TKPRFYKEVKTNEHGEFKVKLPFLVKKHVKRIKGCNFKLLSSNEPNCAIA 118

Query: 118 SAATSSSLHLKSRKQGLHIFSAGFFSFKPLKQPTLCNQK 156
           S +TSSSL LK + Q  HIFSAG FSFKP+K+P  C++K
Sbjct: 119 STSTSSSLSLKKKLQQEHIFSAGIFSFKPIKKPKFCDKK 157


>Medtr7g027020.1 | RALF related | HC | chr7:9138594-9140162 |
           20130731
          Length = 173

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 31  VVGTVYCDTCFQQDFSMGSHFISGASVAVECK----DGDGSSNSSFKKEVKTDEHGKFRV 86
           V+G VYCD C    FS  S+F+ GA V V+C         +   +      T+++G +R+
Sbjct: 39  VMGFVYCDFCSNNSFSRHSYFLPGAEVKVDCMFKAISAKTTEQITLSVNRTTNKYGMYRI 98

Query: 87  HLP----FSVSKHVKRIKRCSVKLISSSEPYCAV-ASAATSSSLHLKSRKQGLHIFSAGF 141
            +P       ++  + +  C   LI SS   C V    +T++ + +K+RK  L I+S   
Sbjct: 99  EVPSVDGVRCAEGTEVMSSCQANLIGSSTTACNVPGYKSTANVISVKARKTNLCIYSLNA 158

Query: 142 FSFKPLKQPT-LC 153
            +F+P K+ T LC
Sbjct: 159 LNFRPSKKDTGLC 171


>Medtr2g016020.1 | pollen Ole e I family allergens | HC |
          chr2:4817560-4818701 | 20130731
          Length = 168

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 31 VVGTVYCDTCFQQDFSMGSHFISGASVAVECKDGDGSSNSSFKKEVKTDEHGKFRVHL 88
          V G VYCDTC  Q  +  + FI GA+V VECK+ +G+   +F KE  TD+ GK+ V +
Sbjct: 30 VEGVVYCDTCRTQFITRLTEFIEGATVRVECKEDNGT--LTFNKEATTDKSGKYSVEI 85


>Medtr7g405770.1 | Lipid transfer protein | HC | chr7:249512-248231
           | 20130731
          Length = 173

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)

Query: 31  VVGTVYCDTCFQQDFSMGSHFISGASVAVECKDGDGSSNS----SFKKEVKTDEHGKFRV 86
           V G VYCD C    FS  S+ + G  V +EC+    S  +    +F     TD  G +++
Sbjct: 32  VEGIVYCDACSTGTFSKHSYLLPGVDVHIECRFRASSPRTNEQINFSVNRTTDREGAYKL 91

Query: 87  HLP--------FSVSKHVKRIKRCSVKLI--SSSEPYCAVASAATSSSLHLKSRKQGLHI 136
            +P         ++  + + +  C   LI  SSS   C V    ++ S  +  ++  L +
Sbjct: 92  DIPSVDGTNCKIAMDGNSQIVSLCQASLIGTSSSSYSCNVPFLKSTGSSQILKQENNLCV 151

Query: 137 FSAGFFSFKP---LKQPTLC 153
           +S G  S+KP   +   TLC
Sbjct: 152 YSLGALSYKPPQNMINTTLC 171