Miyakogusa Predicted Gene

Lj1g3v3025190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3025190.1 Non Characterized Hit- tr|D7M7E1|D7M7E1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,35.58,9e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.29932.1
         (573 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g015120.2 | DUF4378 domain protein | HC | chr7:4563325-455...   433   e-121
Medtr7g015120.1 | DUF4378 domain protein | HC | chr7:4561469-455...   431   e-120
Medtr6g015370.1 | longifolia protein | HC | chr6:5027995-5022924...   374   e-103
Medtr3g026110.1 | longifolia protein | HC | chr3:8012479-8005912...   167   3e-41

>Medtr7g015120.2 | DUF4378 domain protein | HC |
           chr7:4563325-4558284 | 20130731
          Length = 718

 Score =  433 bits (1114), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 282/598 (47%), Positives = 352/598 (58%), Gaps = 119/598 (19%)

Query: 14  EFNRTIQTESPPKSQIRVAINPPSEITMKQHDTPSQKSLEFCDIVKDSMYREAQGLSLKT 73
           EFN  I+TES    QI+++ NP S++           S++F DIVKDSM+REA+ L +KT
Sbjct: 104 EFNGIIKTESLSTKQIQISRNPHSKV-----------SVDFFDIVKDSMHREAKELYVKT 152

Query: 74  ATKEKKKGQTHTL-KHIDSPRPLQPHKSINGGVTAANEPFHVLSKSKKSPWDLPRLSYDG 132
            TK++ KG  ++L +HIDSPRP          V  + EP H LS+SKK+ WD PRLSYD 
Sbjct: 153 LTKQEIKGHGYSLNQHIDSPRP----------VIVSKEPLHTLSRSKKAHWDSPRLSYDA 202

Query: 133 RDTQDKFKSATKHKELPRLSLDSRQGSTRGFNEGNKAHNLLKDPQKVYGIGRNYNTVLNN 192
                  KS T++KELPRLSLDS+QGS RG +EGNKA N+    Q+  G  RN + +L+ 
Sbjct: 203 ------LKSTTRYKELPRLSLDSKQGSIRGIDEGNKARNVSNGSQR--GYERNSSAMLDK 254

Query: 193 LQEPETSKRSSCVVAKLMGLEALPQKTQT-----CGSSDD-----TIT------------ 230
           +QEPETSKRSS VV KLMGLEALP  TQT     C +  +     TIT            
Sbjct: 255 IQEPETSKRSSSVVVKLMGLEALPDSTQTGRTSVCSTDKNEIIERTITGDEYKKHQSSVS 314

Query: 231 -----------NVTPYSRFALEPS-PWRKPDSRRSLQSQDS-KGSESDIKASKSSLSVYG 277
                      NV P SRF LEP+ PW++ D+ ++   QDS K S+S++KASK SLSVYG
Sbjct: 315 PRNRRGNNSTINVKPTSRFMLEPTTPWKQSDADQNYLLQDSSKVSDSNVKASKPSLSVYG 374

Query: 278 EIEKRVSELEFKRSGKDLRALKQILDAMQRYKDTSDIARDQALNSPSNNQNNTSISENSN 337
           EIEKR+ ELEFK+SGKDLRALKQIL+AMQR+ D+S               NN S+SENS 
Sbjct: 375 EIEKRLGELEFKKSGKDLRALKQILEAMQRFTDSSS----------DTGSNNASLSENSK 424

Query: 338 VRSPRIPQKDPAS--VTVEKSNS---SKMPIVIMKPARVTRKANNSSPPST--------- 383
           V+SPR+ QKD  S  VTVE+SNS   SK+PIVI KP +VTRKANN  PPST         
Sbjct: 425 VQSPRVQQKDFPSDFVTVEQSNSIEGSKLPIVITKPTKVTRKANN--PPSTELPIPDKSR 482

Query: 384 -----PRNGRLVDKQTAKGIXXXXXXXXX----------XXXXXXXXKLMQSSKVSQDGN 428
                P NG L+ KQ AKGI                           K MQSSK   + N
Sbjct: 483 LIKCSPTNGSLICKQKAKGIGSTTKITTKPFAQQVPSADKNNYFKTSKSMQSSKSPHETN 542

Query: 429 GESTANSGNMTVTGSPRLQKKFGLERRXXXXXXXXXXXINRRKHNRQPVEL-----SSPR 483
           G++T          S RL+KKFG+ERR           +NRRKHN Q VEL     S+ +
Sbjct: 543 GQNT--------IASRRLEKKFGVERRSAPTSPSSDSTVNRRKHNSQLVELSTSSSSTSK 594

Query: 484 QNISTLPERNERFGDISYHWKGVMHHVNVISPDFDRKRSLATHSDIEIIHIDQSGNIN 541
           Q+ S   +R+E + +++ HW+   HHVNVIS DF   RSLAT SDIE+IH+DQS NIN
Sbjct: 595 QSSSISQDRDEYYCEMNSHWRKFKHHVNVISSDFGSNRSLATQSDIEVIHLDQSANIN 652


>Medtr7g015120.1 | DUF4378 domain protein | HC |
           chr7:4561469-4556951 | 20130731
          Length = 912

 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 280/598 (46%), Positives = 350/598 (58%), Gaps = 119/598 (19%)

Query: 14  EFNRTIQTESPPKSQIRVAINPPSEITMKQHDTPSQKSLEFCDIVKDSMYREAQGLSLKT 73
           EFN  I+TES    QI+++ NP S++           S++F DIVKDSM+REA+ L +KT
Sbjct: 86  EFNGIIKTESLSTKQIQISRNPHSKV-----------SVDFFDIVKDSMHREAKELYVKT 134

Query: 74  ATKEKKKGQTHTL-KHIDSPRPLQPHKSINGGVTAANEPFHVLSKSKKSPWDLPRLSYDG 132
            TK++ KG  ++L +HIDSPRP          V  + EP H LS+SKK+ WD PRLSYD 
Sbjct: 135 LTKQEIKGHGYSLNQHIDSPRP----------VIVSKEPLHTLSRSKKAHWDSPRLSYDA 184

Query: 133 RDTQDKFKSATKHKELPRLSLDSRQGSTRGFNEGNKAHNLLKDPQKVYGIGRNYNTVLNN 192
                  KS T++KELPRLSLDS+QGS RG +EGNKA N+    Q+  G  RN + +L+ 
Sbjct: 185 ------LKSTTRYKELPRLSLDSKQGSIRGIDEGNKARNVSNGSQR--GYERNSSAMLDK 236

Query: 193 LQEPETSKRSSCVVAKLMGLEALPQKTQT-----CGSSDDTIT----------------- 230
           +QEPETSKRSS VV KLMGLEALP  TQT     C +  + I                  
Sbjct: 237 IQEPETSKRSSSVVVKLMGLEALPDSTQTGRTSVCSTDKNEIIERTITGDEYKKHQSSVS 296

Query: 231 -----------NVTPYSRFALEPS-PWRKPDSRRSLQSQDS-KGSESDIKASKSSLSVYG 277
                      NV P SRF LEP+ PW++ D+ ++   QDS K S+S++KASK SLSVYG
Sbjct: 297 PRNRRGNNSTINVKPTSRFMLEPTTPWKQSDADQNYLLQDSSKVSDSNVKASKPSLSVYG 356

Query: 278 EIEKRVSELEFKRSGKDLRALKQILDAMQRYKDTSDIARDQALNSPSNNQNNTSISENSN 337
           EIEKR+ ELEFK+SGKDLRALKQIL+AMQR+ D+S               NN S+SENS 
Sbjct: 357 EIEKRLGELEFKKSGKDLRALKQILEAMQRFTDSSS----------DTGSNNASLSENSK 406

Query: 338 VRSPRIPQKDPAS--VTVEKSNS---SKMPIVIMKPARVTRKANNSSPPST--------- 383
           V+SPR+ QKD  S  VTVE+SNS   SK+PIVI KP +VTRKANN  PPST         
Sbjct: 407 VQSPRVQQKDFPSDFVTVEQSNSIEGSKLPIVITKPTKVTRKANN--PPSTELPIPDKSR 464

Query: 384 -----PRNGRLVDKQTAKGIXXXXXXXXX----------XXXXXXXXKLMQSSKVSQDGN 428
                P NG L+ KQ AKGI                           K MQSSK   + N
Sbjct: 465 LIKCSPTNGSLICKQKAKGIGSTTKITTKPFAQQVPSADKNNYFKTSKSMQSSKSPHETN 524

Query: 429 GESTANSGNMTVTGSPRLQKKFGLERRXXXXXXXXXXXINRRKHNRQPVEL-----SSPR 483
           G++T          S RL+KKFG+ERR           +NRRKHN Q VEL     S+ +
Sbjct: 525 GQNT--------IASRRLEKKFGVERRSAPTSPSSDSTVNRRKHNSQLVELSTSSSSTSK 576

Query: 484 QNISTLPERNERFGDISYHWKGVMHHVNVISPDFDRKRSLATHSDIEIIHIDQSGNIN 541
           Q+ S   +R+E + +++ HW+   HHVNVIS DF   RSLAT SDIE+IH+DQS NIN
Sbjct: 577 QSSSISQDRDEYYCEMNSHWRKFKHHVNVISSDFGSNRSLATQSDIEVIHLDQSANIN 634


>Medtr6g015370.1 | longifolia protein | HC | chr6:5027995-5022924 |
           20130731
          Length = 899

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 247/536 (46%), Positives = 301/536 (56%), Gaps = 83/536 (15%)

Query: 13  IEFNRTIQTESPPKSQIRVAINPPSEITMKQHDTPSQKSLEFCDIVKDSMYREAQGLSLK 72
           IEFNRTI  E P  S ++   N  SE   KQHD    +S  F DIVKDSM+++AQ LS+K
Sbjct: 101 IEFNRTIHIEPPSISPMKTTENSNSEAAAKQHDNQRNQSPNFHDIVKDSMHKDAQRLSVK 160

Query: 73  TATKEKKKGQTHTLKHIDSPRPLQPHKSINGGVTAANEPFHVLSKSKKSPWDLPRLSYDG 132
           T  KE+KKG+   LKHIDSPRP+                          PWD PRLSYDG
Sbjct: 161 TLAKEEKKGRI--LKHIDSPRPM-------------------------VPWDSPRLSYDG 193

Query: 133 RDTQDKFKSATKHKELPRLSLDSRQGSTRGFNEGNKAHNLLKDPQKVYGIGRNYNTVLNN 192
           RD Q   K ATK KELPR SLDS++ S + FNEG K  NLLK PQ V G     NT++  
Sbjct: 194 RDIQSVSKFATKQKELPRFSLDSKERSIKSFNEGTKTRNLLKGPQNVRG---GSNTMVKQ 250

Query: 193 LQEPETSKRSSCVVAKLMGLEALPQKTQTCGSS----DDTITNV-TPYSRFALEPSPWRK 247
           ++EPE++KR S VVAKLMGLEA P  ++T  S     DDT       Y     + S ++K
Sbjct: 251 MEEPESAKRPSSVVAKLMGLEAFPDWSETSDSCNTNKDDTFAGSRMSYEYMQQQDSSFQK 310

Query: 248 P-------DSRR-------SLQSQDSKGSESDIKASKSSLSVYGEIEKRVSELEFKRSGK 293
                    SRR       +  SQ SK +E   KAS  SLSVYGEIEKR+++LEFK+SGK
Sbjct: 311 TSKGTNMLQSRRDGSITNETPYSQFSKNNEPSTKASNRSLSVYGEIEKRMADLEFKKSGK 370

Query: 294 DLRALKQILDAMQRYKDTSDIARDQALNSPSNNQNNTSISENSNVRSPRIPQKDPASVTV 353
           DLRALKQIL+AM RYK++ D A DQ  NSP +N +N+S+ E+ NV+SPR  QK+P SVT 
Sbjct: 371 DLRALKQILEAMHRYKESLDTASDQTSNSPYDNTSNSSVGESLNVQSPRTRQKNPTSVTA 430

Query: 354 EKSNS---SKMPIVIMKPARVTRKANNSSPPSTPRNGR------------------LVDK 392
           E+ +S   SK PIVIMKP +V RK NNSS P  P +G+                   + +
Sbjct: 431 ERLSSTQGSKSPIVIMKPTKVARKTNNSSSPEMPIHGKSSGNKVYRSDPTDGMSVVKLGR 490

Query: 393 QTAKGIXXXXXX---------XXXXXXXXXXXKLMQSSKVSQDGNGESTANSGNMTVTGS 443
           Q  KG                           KLMQSSKV +  NGE+  NSG M  T S
Sbjct: 491 QATKGSPAIKHVKDPISPPFHSVDRSNRMRTSKLMQSSKVPRVINGENNTNSGVMAETRS 550

Query: 444 PRLQKKFGLERRXXXXXXXXXXXINRRKHNRQPVELSSP----RQNISTLPERNER 495
           PRLQKKFGLERR            NRR+ NRQ  +LS P    RQ +S L ERN++
Sbjct: 551 PRLQKKFGLERRSPPTSPKSDISSNRRQQNRQSTDLSLPSKTSRQKLSPLKERNDQ 606


>Medtr3g026110.1 | longifolia protein | HC | chr3:8012479-8005912 |
           20130731
          Length = 1088

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 220/467 (47%), Gaps = 110/467 (23%)

Query: 26  KSQIRVAINPPSEITMKQHDTPSQK----SLEFCDIVKDSMYREAQGLSLKTATKEKKKG 81
           K+++  +   PS  T     T S +    SL+  D+VKDSMYR+ +G S K+  KE+   
Sbjct: 108 KAEVETSYETPSRETFMNQPTISPRFGRHSLDLRDVVKDSMYRDPRGPSGKSMAKEQ--S 165

Query: 82  QTHTLKHIDSPRPLQPHKSIN--GGVTA---------ANEPFHVLSKSKKSPW------- 123
             H +KH DSPRPLQ  K ++   GV             E   VLSK + +PW       
Sbjct: 166 TIHAMKHRDSPRPLQMSKYVDRSYGVEIDEKQSVPIDLKESIRVLSKLRDAPWHYAESTR 225

Query: 124 -------------------DLPRLSYDGRDT-------QDKFKSATKHKELPRLSLDSRQ 157
                              D P L+YDGR+T       ++  +SA K KE PR SLDS++
Sbjct: 226 ENPRSSQEVKDGHWHSISKDAPWLAYDGRETSRLSFESRETIRSAPKLKEFPRHSLDSKE 285

Query: 158 GSTRGFNEGNKAHNLLKDPQKVYGIGRNYNTVLNNLQEPETSKRSSC--VVAKLMGLEAL 215
           GS R ++   K ++L ++   VYG     N   ++ Q+  +S +S    VVAKLMGLEA+
Sbjct: 286 GSWRTYSSEAKPNHLSRN---VYGATSTSNEKFSSPQQSSSSSQSRPPSVVAKLMGLEAI 342

Query: 216 PQK----------TQTCGSSD-------------------------------------DT 228
           P            T+T  + D                                     + 
Sbjct: 343 PDSSFAVDTQPGSTETYSAQDNGQFPRSSKNGFIRPLRVSNSPKISLKDPTSPRRKNSEV 402

Query: 229 ITNVTPYSRFALEPSPWRKPDSRRSLQSQDSKGSESDIKASKSSLSVYGEIEKRVSELEF 288
           +      S+F LEP+PW++ D+ R+ Q Q  + +++ ++   SS SVY EIEKR+ +LEF
Sbjct: 403 VMKPVSSSKFPLEPAPWKQHDANRNSQKQSLRTTKAPLRTLDSSPSVYSEIEKRLKDLEF 462

Query: 289 KRSGKDLRALKQILDAMQRYKDTSDIARDQALNSPSNNQNNTSISENSNVRSPRIPQKDP 348
           K+SG+DLRALKQIL+AMQ          +Q  N   +  +    + N N     + Q++P
Sbjct: 463 KQSGRDLRALKQILEAMQEKGLLESRKEEQVPNVVGSRSDYEPKATNLNQNFRSVKQQNP 522

Query: 349 -----ASVTVEKSNSSKM---PIVIMKPARVTRKANNSSPPSTPRNG 387
                 S TV+ ++S++    PIVIMKPA++  K+  S+  + P  G
Sbjct: 523 QRNNFLSSTVKGNDSARAFDSPIVIMKPAKLVEKSEISASSAIPMGG 569