Miyakogusa Predicted Gene

Lj1g3v3018830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3018830.1 tr|Q016Y8|Q016Y8_OSTTA WGS project CAID00000000
data, contig chromosome 06 OS=Ostreococcus tauri GN=,20.39,0.013,
,gene.g33961.t1.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g010300.1 | embryo defective 2410 protein | HC | chr1:1902...   296   9e-81
Medtr3g108080.1 | embryo defective 2410 protein | HC | chr3:4994...   248   2e-66
Medtr3g108080.2 | embryo defective 2410 protein | HC | chr3:4994...   248   2e-66

>Medtr1g010300.1 | embryo defective 2410 protein | HC |
            chr1:1902541-1916763 | 20130731
          Length = 2205

 Score =  296 bits (758), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 143/175 (81%), Positives = 155/175 (88%)

Query: 5    RFDIKWTAPIAEGSFNDARGDIIISHDFITVNSSSAAFDLYTRIQTSYPGDFYLKNEEFY 64
            RFDIKWTAP AEGSF DARGDIIISH+FITVNSSSAAFDL TRIQTSY  D  L   + Y
Sbjct: 1019 RFDIKWTAPTAEGSFGDARGDIIISHEFITVNSSSAAFDLCTRIQTSYLDDLSLNKGDPY 1078

Query: 65   APRAIPFTIDGVELDLRMRGFEFFSLVSAYTMDSPKPLHLKATGRIKFQGKVLKPSGSIS 124
            APRAIPFTIDGVE+DLRMRGFEFF+LVSAYTMDSP+PLHLKA+GR+KFQGKVLKPSGSIS
Sbjct: 1079 APRAIPFTIDGVEMDLRMRGFEFFNLVSAYTMDSPRPLHLKASGRVKFQGKVLKPSGSIS 1138

Query: 125  EQNFEMNRQHVQMLEKGITDSLDGEISISGLKLNQLMLAPQLSGLLRISPERIKV 179
            EQN + NR H   LEKGI+DSL GE+SISGLKLNQLMLAPQLSGLL +SPE IK+
Sbjct: 1139 EQNSDTNRHHADTLEKGISDSLVGEVSISGLKLNQLMLAPQLSGLLTVSPECIKL 1193


>Medtr3g108080.1 | embryo defective 2410 protein | HC |
            chr3:49945022-49930645 | 20130731
          Length = 2007

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 115/174 (66%), Positives = 143/174 (82%), Gaps = 1/174 (0%)

Query: 6    FDIKWTAPIAEGSFNDARGDIIISHDFITVNSSSAAFDLYTRIQTSYPGDFYLKNEEFYA 65
             DI WTAP+AEGSF+DARGD+IISHDF+TVNS+SAAFDLY ++ TS+  D  L  EEF  
Sbjct: 831  LDIHWTAPLAEGSFSDARGDVIISHDFVTVNSASAAFDLYMKVPTSHSDDISLTREEF-C 889

Query: 66   PRAIPFTIDGVELDLRMRGFEFFSLVSAYTMDSPKPLHLKATGRIKFQGKVLKPSGSISE 125
            P+AIPFT+DG+E DL M  FEFF L++ YT+D P+P+ LKATGR+KFQGK+++PS ++ E
Sbjct: 890  PKAIPFTVDGIEFDLHMHEFEFFRLITTYTLDFPRPMLLKATGRVKFQGKLIEPSCAMME 949

Query: 126  QNFEMNRQHVQMLEKGITDSLDGEISISGLKLNQLMLAPQLSGLLRISPERIKV 179
            QNF+ N Q + +LEKG  D L GE+SISGLKLNQLMLAPQLSGLLR+SPE IK+
Sbjct: 950  QNFDKNGQQLHILEKGSADCLVGEVSISGLKLNQLMLAPQLSGLLRVSPECIKL 1003


>Medtr3g108080.2 | embryo defective 2410 protein | HC |
            chr3:49945038-49933564 | 20130731
          Length = 1649

 Score =  248 bits (634), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 115/174 (66%), Positives = 143/174 (82%), Gaps = 1/174 (0%)

Query: 6    FDIKWTAPIAEGSFNDARGDIIISHDFITVNSSSAAFDLYTRIQTSYPGDFYLKNEEFYA 65
             DI WTAP+AEGSF+DARGD+IISHDF+TVNS+SAAFDLY ++ TS+  D  L  EEF  
Sbjct: 831  LDIHWTAPLAEGSFSDARGDVIISHDFVTVNSASAAFDLYMKVPTSHSDDISLTREEF-C 889

Query: 66   PRAIPFTIDGVELDLRMRGFEFFSLVSAYTMDSPKPLHLKATGRIKFQGKVLKPSGSISE 125
            P+AIPFT+DG+E DL M  FEFF L++ YT+D P+P+ LKATGR+KFQGK+++PS ++ E
Sbjct: 890  PKAIPFTVDGIEFDLHMHEFEFFRLITTYTLDFPRPMLLKATGRVKFQGKLIEPSCAMME 949

Query: 126  QNFEMNRQHVQMLEKGITDSLDGEISISGLKLNQLMLAPQLSGLLRISPERIKV 179
            QNF+ N Q + +LEKG  D L GE+SISGLKLNQLMLAPQLSGLLR+SPE IK+
Sbjct: 950  QNFDKNGQQLHILEKGSADCLVGEVSISGLKLNQLMLAPQLSGLLRVSPECIKL 1003