Miyakogusa Predicted Gene

Lj1g3v3008790.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3008790.2 Non Characterized Hit- tr|I3SZG2|I3SZG2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.31,0,BIOTIN,Biotin-binding site; BCCP: acetyl-CoA carboxylase,
biotin carboxyl carr,Acetyl-CoA biotin car,CUFF.29901.2
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   198   4e-51
Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   150   1e-36
Medtr7g080290.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   109   3e-24

>Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:3720376-3725453 | 20130731
          Length = 287

 Score =  198 bits (504), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/166 (65%), Positives = 128/166 (77%), Gaps = 8/166 (4%)

Query: 1   MASSFTVPCPKCLSFTGSGLNSRTPPPQNMQIRSGLGLKESGSFGSLSHDSAAPNGIQAL 60
           MAS  TVPCPKCL+F   GL S+T   +N+Q    LG  +S SFGSLS D  + NGIQ L
Sbjct: 1   MASFTTVPCPKCLTFHHLGLKSQTSS-RNVQ----LGFMKSQSFGSLSCDLVS-NGIQCL 54

Query: 61  NRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKDN--GKPSGPSTSTDASS 118
            RKQ+SVW+ QALP+E AT+ NSSNS PVL+ EP  A  +EKDN  GKP GPS STDASS
Sbjct: 55  ERKQFSVWRSQALPNEVATIENSSNSVPVLINEPNGALPKEKDNHNGKPPGPSASTDASS 114

Query: 119 ISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQPPPAT 164
           +S FM+QVS+LVKLVDS+DI+EL+LKQA YELMIRKKEALQPPP +
Sbjct: 115 VSTFMDQVSELVKLVDSRDIMELELKQAGYELMIRKKEALQPPPVS 160



 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 53/71 (74%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYR P PGEPPF            +CIIEAMKLMNEIEAD+SGTI EVL EDGKPV
Sbjct: 217 MAGTFYRCPGPGEPPFVKVGDQVQKGQVVCIIEAMKLMNEIEADRSGTIVEVLVEDGKPV 276

Query: 279 SVDSPLFAIAP 289
           SV  PLFAIAP
Sbjct: 277 SVGMPLFAIAP 287


>Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr6:4863345-4867174 | 20130731
          Length = 278

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 117/164 (71%), Gaps = 16/164 (9%)

Query: 3   SSFTVPCPKC-LSFTGSGLNSRTPPPQNMQIRSGLGLKESGSFGSLSHDSAAPNGIQALN 61
           +SF+VPCPKC +  +  GL S       +  +SGL LK S SFGSLS +SA+  GIQ LN
Sbjct: 2   ASFSVPCPKCPVPSSLLGLKSN-----KILFQSGLSLKNSQSFGSLSAESAS-FGIQCLN 55

Query: 62  RKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKDNGKPSGP-STSTDASSIS 120
           +KQ+ V K QA  +EAA V N  NSAP       VAS EEK+N   S P ST +D S+IS
Sbjct: 56  KKQFPV-KIQAQLNEAAVVENL-NSAPT------VASSEEKENQNGSVPASTVSDESAIS 107

Query: 121 AFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQPPPAT 164
           AFM+QV+DLV LVDS+DIVELQLKQ+DYEL+IRKKEALQPPPAT
Sbjct: 108 AFMSQVADLVILVDSRDIVELQLKQSDYELVIRKKEALQPPPAT 151



 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 53/71 (74%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYR P PGEPPF            ICIIEAMKLMNEIEAD+SGTIAE+L EDGKPV
Sbjct: 208 MAGTFYRCPGPGEPPFVQVGDTVQKGQVICIIEAMKLMNEIEADQSGTIAEILVEDGKPV 267

Query: 279 SVDSPLFAIAP 289
           SVD PLF I P
Sbjct: 268 SVDLPLFVIVP 278


>Medtr7g080290.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:30536157-30530313 | 20130731
          Length = 276

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 55/71 (77%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSPAPGEPPF            +CIIEAMKLMNEIEADKSGTI E++AED KPV
Sbjct: 206 MAGTFYRSPAPGEPPFVKVGDEVKKGQVVCIIEAMKLMNEIEADKSGTIVEIIAEDAKPV 265

Query: 279 SVDSPLFAIAP 289
           SVD+PLF I P
Sbjct: 266 SVDTPLFVIEP 276



 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 7/84 (8%)

Query: 80  VGNSSNSAPVLVKEPKVASLEEKDNGKPSGPSTST--DASSISAFMNQVSDLVKLVDSKD 137
           +  SSN  P     PK  S  E        PS+S   D  SIS   +Q++ LVKLVDS+D
Sbjct: 74  LDGSSNDVP-----PKAKSDVEPPTAPSVEPSSSVLADQESISELFDQIASLVKLVDSRD 128

Query: 138 IVELQLKQADYELMIRKKEALQPP 161
           IVEL+LKQ + E++IRKKEA+  P
Sbjct: 129 IVELKLKQLNCEVLIRKKEAMPQP 152