Miyakogusa Predicted Gene

Lj1g3v3006700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3006700.1 Non Characterized Hit- tr|K3Z6S9|K3Z6S9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022248,50.51,1e-18,seg,NULL,CUFF.29857.1
         (457 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g012940.1 | hypothetical protein | HC | chr7:3661702-36592...   382   e-106

>Medtr7g012940.1 | hypothetical protein | HC | chr7:3661702-3659291
           | 20130731
          Length = 435

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 245/420 (58%), Positives = 285/420 (67%), Gaps = 50/420 (11%)

Query: 54  DHLVQAIASLLLSQP--HLIPTQLHPKPHTRDNLDLNTHHLKHQ--HQTH-STISSLLDR 108
           DHL+Q I+S+LLS    HL+   L       DNL    HH K Q  HQ H ST+SSL++R
Sbjct: 50  DHLIQTISSVLLSPQLNHLVHHNLVHDHLVHDNL---VHHPKSQTLHQNHQSTLSSLINR 106

Query: 109 IESLESSLNLH-THQS--LRHAAARVIQTHFRSFLVRRSRTLSYLKHLASIXXXXXXXXX 165
           IESLESSLN H THQS  LRH+AARVIQTHFRSFLVRRSRTL  LK LASI         
Sbjct: 107 IESLESSLNQHQTHQSQSLRHSAARVIQTHFRSFLVRRSRTLRNLKLLASIKSSFIAIRS 166

Query: 166 XXXXXPHFDFSALSFKAMNLLLELDSIQDCDPMILDGKRSISRDLVQFLDSIEEVAMKKH 225
                 HFDF ALS KA+NLL++LDSIQDCD MI+DGKRSISRDLVQFLDSIEEVA KK 
Sbjct: 167 SFSTHTHFDFPALSLKAVNLLIKLDSIQDCDTMIVDGKRSISRDLVQFLDSIEEVAAKKR 226

Query: 226 LHCVKAVKNPRYGQKVQKPKNV--GDEEKRKLLQNLRGRVERISKLCNNPSANGEDLEPD 283
           +H VKAVK+ R GQKVQ+P+     D+EK+KLL+NLRGRVE+ISKLC     + E LE +
Sbjct: 227 MHYVKAVKSSRSGQKVQRPRKPEGDDDEKKKLLKNLRGRVEKISKLCKVYGDDEEGLENE 286

Query: 284 EGIYDHEDEDEDGVTNVLMSRRSEVSANKNGGFVQRQGVVQPRVKKSVRFAENGNTYEVY 343
           E ++D +D+ +D     ++  R +   NKNG FVQRQ V+QPRVKKSVRFAENGN  EVY
Sbjct: 287 ESVHDDDDDYDDDGVTDVVVARRD--GNKNGVFVQRQ-VIQPRVKKSVRFAENGNVCEVY 343

Query: 344 NSSTCEPDLNGDVTCSEGSSSGDDQVEVLENVSCAVEDVLDSSQGAEND------DSVGS 397
           ++ TCE D         GSSS DDQ EVLEN   AV DV+DSSQG E+D      DS GS
Sbjct: 344 STRTCESD---------GSSSNDDQGEVLENRKFAVVDVVDSSQGVEDDEEVLVGDSGGS 394

Query: 398 PHSSDDGEKLSRKGLRNGGRIIVKEQVQGHQEQLLFSAPLPLKMENRTDSKKSKGVKILT 457
             SSDDG+                  +  HQE++LFSAPLPLKME+RTD  KSKGVKILT
Sbjct: 395 TRSSDDGD------------------IVAHQEKILFSAPLPLKMESRTD-LKSKGVKILT 435