Miyakogusa Predicted Gene

Lj1g3v2980360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2980360.1 Non Characterized Hit- tr|I1LWM1|I1LWM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56077
PE,57.75,3e-18,EMP24_GP25L,GOLD,CUFF.29805.1
         (100 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g011490.1 | emp24/gp25L/p24 family protein | HC | chr7:309...   100   3e-22
Medtr6g012770.1 | emp24/gp25L/p24 family protein | HC | chr6:396...    83   5e-17
Medtr4g082315.1 | emp24/gp25L/p24 family protein | HC | chr4:320...    83   7e-17
Medtr5g042260.1 | emp24/gp25L/p24 family protein | LC | chr5:185...    71   2e-13
Medtr5g042320.2 | emp24/gp25L/p24 family protein | LC | chr5:186...    70   4e-13
Medtr5g042320.1 | emp24/gp25L/p24 family protein | LC | chr5:186...    70   5e-13

>Medtr7g011490.1 | emp24/gp25L/p24 family protein | HC |
          chr7:3095161-3097688 | 20130731
          Length = 212

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/70 (64%), Positives = 58/70 (82%)

Query: 1  MSNQILFLLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPV 60
          M N IL L+ + PALMC+ V+SMRF+LKS  PKCI E+I SNA+TVG Y VV+P+EGYP+
Sbjct: 1  MLNSILLLIAIVPALMCNVVNSMRFDLKSGNPKCIVEEIMSNAMTVGNYSVVNPNEGYPI 60

Query: 61 PDSHKITLRI 70
          PDSHK+T+R+
Sbjct: 61 PDSHKLTVRL 70


>Medtr6g012770.1 | emp24/gp25L/p24 family protein | HC |
          chr6:3962787-3967786 | 20130731
          Length = 212

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 47/53 (88%)

Query: 18 SFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKITLRI 70
          SFV+SMRF+L+    KCI+EDIK NA+TVGKY VV+P+EGYP+PDSHKIT+++
Sbjct: 17 SFVNSMRFDLQMGSTKCISEDIKINAMTVGKYSVVNPNEGYPLPDSHKITVKV 69


>Medtr4g082315.1 | emp24/gp25L/p24 family protein | HC |
          chr4:32041080-32044628 | 20130731
          Length = 216

 Score = 82.8 bits (203), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 47/52 (90%)

Query: 20 VDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKITLRIV 71
           +S+RFELKS+  KCI+EDIKSN++TVGKY +V+P+EGYP+PDSH+IT+R+ 
Sbjct: 24 TESLRFELKSSLTKCISEDIKSNSMTVGKYTIVNPNEGYPLPDSHRITVRVT 75


>Medtr5g042260.1 | emp24/gp25L/p24 family protein | LC |
          chr5:18585028-18586902 | 20130731
          Length = 219

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 47/67 (70%)

Query: 4  QILFLLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDS 63
           +LFLL++   L    V SMRF+L++   +CI EDIK N++T+G Y +V+P+EG P+P  
Sbjct: 9  HLLFLLVLMVGLFTCLVQSMRFDLQTGVTRCIAEDIKKNSMTIGNYSIVNPNEGQPLPSD 68

Query: 64 HKITLRI 70
          H I++++
Sbjct: 69 HTISVQV 75


>Medtr5g042320.2 | emp24/gp25L/p24 family protein | LC |
           chr5:18606270-18609160 | 20130731
          Length = 200

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 5/91 (5%)

Query: 5   ILFLLLVSPALMCSFVDSMRFELKSNQPK--CINEDIKSNALTVGKYYVVSPSEGYPVPD 62
           +LFLL+V+  L    V SMRF+L + + K  C +ED+K N + VG Y +V+P+EG+P+PD
Sbjct: 13  LLFLLVVAMGLFSFSVQSMRFDLPNGKGKARCFSEDMKKNTMVVGNYSIVNPNEGHPLPD 72

Query: 63  SHKITLRIV--WNLVILHLLQLRPVTTQLVF 91
           +H IT+++    ++   HL + R    Q  F
Sbjct: 73  NHTITVQVATHGSMAKYHLAE-RVQAGQFAF 102


>Medtr5g042320.1 | emp24/gp25L/p24 family protein | LC |
           chr5:18606270-18607907 | 20130731
          Length = 223

 Score = 69.7 bits (169), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 5/91 (5%)

Query: 5   ILFLLLVSPALMCSFVDSMRFELKSNQPK--CINEDIKSNALTVGKYYVVSPSEGYPVPD 62
           +LFLL+V+  L    V SMRF+L + + K  C +ED+K N + VG Y +V+P+EG+P+PD
Sbjct: 13  LLFLLVVAMGLFSFSVQSMRFDLPNGKGKARCFSEDMKKNTMVVGNYSIVNPNEGHPLPD 72

Query: 63  SHKITLRIV--WNLVILHLLQLRPVTTQLVF 91
           +H IT+++    ++   HL + R    Q  F
Sbjct: 73  NHTITVQVATHGSMAKYHLAE-RVQAGQFAF 102