Miyakogusa Predicted Gene

Lj1g3v2940680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2940680.1 Non Characterized Hit- tr|K3YRB2|K3YRB2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016730,67.33,4e-19,CATIONIC AMINO ACID TRANSPORTER,Cationic amino
acid transporter; AMINO ACID TRANSPORTER,Amino acid/p,CUFF.29736.1
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g007850.2 | cationic amino acid transporter | HC | chr7:17...    82   1e-16
Medtr7g007850.4 | cationic amino acid transporter | HC | chr7:17...    82   1e-16
Medtr7g007850.3 | cationic amino acid transporter | HC | chr7:17...    82   1e-16
Medtr7g007850.5 | cationic amino acid transporter | HC | chr7:17...    82   1e-16
Medtr7g007850.1 | cationic amino acid transporter | HC | chr7:17...    82   1e-16
Medtr6g027650.1 | cationic amino acid transporter 2, vacuolar pr...    52   1e-07
Medtr6g027630.1 | cationic amino acid transporter 2, vacuolar pr...    51   2e-07
Medtr6g027630.2 | cationic amino acid transporter 2, vacuolar pr...    51   2e-07
Medtr6g027680.1 | cationic amino acid transporter 2, vacuolar pr...    51   2e-07
Medtr6g027660.1 | cationic amino acid transporter 2, vacuolar pr...    50   4e-07

>Medtr7g007850.2 | cationic amino acid transporter | HC |
           chr7:1709951-1715449 | 20130731
          Length = 538

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 51/88 (57%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK ++SP+EK                                FV+TGTVA D GP V
Sbjct: 27  ALRSKRVISPSEKTARDNSGHGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAV 86

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           T+SFI AGASCVINALC+AELASRFPAV
Sbjct: 87  TLSFIFAGASCVINALCYAELASRFPAV 114


>Medtr7g007850.4 | cationic amino acid transporter | HC |
           chr7:1709964-1715466 | 20130731
          Length = 597

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 51/88 (57%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK ++SP+EK                                FV+TGTVA D GP V
Sbjct: 27  ALRSKRVISPSEKTARDNSGHGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAV 86

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           T+SFI AGASCVINALC+AELASRFPAV
Sbjct: 87  TLSFIFAGASCVINALCYAELASRFPAV 114


>Medtr7g007850.3 | cationic amino acid transporter | HC |
           chr7:1709951-1715449 | 20130731
          Length = 496

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 51/88 (57%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK ++SP+EK                                FV+TGTVA D GP V
Sbjct: 27  ALRSKRVISPSEKTARDNSGHGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAV 86

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           T+SFI AGASCVINALC+AELASRFPAV
Sbjct: 87  TLSFIFAGASCVINALCYAELASRFPAV 114


>Medtr7g007850.5 | cationic amino acid transporter | HC |
           chr7:1709964-1715466 | 20130731
          Length = 496

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 51/88 (57%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK ++SP+EK                                FV+TGTVA D GP V
Sbjct: 27  ALRSKRVISPSEKTARDNSGHGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAV 86

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           T+SFI AGASCVINALC+AELASRFPAV
Sbjct: 87  TLSFIFAGASCVINALCYAELASRFPAV 114


>Medtr7g007850.1 | cationic amino acid transporter | HC |
           chr7:1709964-1715466 | 20130731
          Length = 567

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 51/88 (57%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK ++SP+EK                                FV+TGTVA D GP V
Sbjct: 27  ALRSKRVISPSEKTARDNSGHGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAV 86

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           T+SFI AGASCVINALC+AELASRFPAV
Sbjct: 87  TLSFIFAGASCVINALCYAELASRFPAV 114


>Medtr6g027650.1 | cationic amino acid transporter 2, vacuolar
           protein | HC | chr6:9634179-9625373 | 20130731
          Length = 621

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 72  FVITGTVARD-AGPGVTISFILAGASCVINALCFAELASRFPA 113
           +V+ GTVAR+ AGP + +SF++AG +  I+ALC+AELASRFP+
Sbjct: 59  YVLVGTVAREHAGPALPLSFMVAGIAAAISALCYAELASRFPS 101


>Medtr6g027630.1 | cationic amino acid transporter 2, vacuolar
           protein | HC | chr6:9620111-9612139 | 20130731
          Length = 628

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 72  FVITGTVARD-AGPGVTISFILAGASCVINALCFAELASRFPA 113
           +V+ GTVAR+ AGP + +SF++AG +  ++ALC+AELASRFP+
Sbjct: 66  YVLVGTVAREHAGPALPLSFMVAGIAAALSALCYAELASRFPS 108


>Medtr6g027630.2 | cationic amino acid transporter 2, vacuolar
           protein | HC | chr6:9620111-9612690 | 20130731
          Length = 582

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 72  FVITGTVARD-AGPGVTISFILAGASCVINALCFAELASRFPA 113
           +V+ GTVAR+ AGP + +SF++AG +  ++ALC+AELASRFP+
Sbjct: 66  YVLVGTVAREHAGPALPLSFMVAGIAAALSALCYAELASRFPS 108


>Medtr6g027680.1 | cationic amino acid transporter 2, vacuolar
           protein | HC | chr6:9659589-9653338 | 20130731
          Length = 575

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 72  FVITGTVARD-AGPGVTISFILAGASCVINALCFAELASRFPA 113
           +V+ GTVAR+ AGP + +SF++AG +  ++ALC+AELASRFP+
Sbjct: 69  YVLVGTVAREHAGPALPLSFMVAGIAAALSALCYAELASRFPS 111


>Medtr6g027660.1 | cationic amino acid transporter 2, vacuolar
           protein | HC | chr6:9642574-9637500 | 20130731
          Length = 629

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 35/43 (81%), Gaps = 1/43 (2%)

Query: 72  FVITGTVARD-AGPGVTISFILAGASCVINALCFAELASRFPA 113
           +V+ GTVAR+ AGP +  SF++AG +  ++ALC+AELASRFP+
Sbjct: 67  YVLVGTVAREHAGPALPFSFMVAGIAAALSALCYAELASRFPS 109