Miyakogusa Predicted Gene

Lj1g3v2939610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2939610.1 tr|E9JRK5|E9JRK5_SETIT Ubiquitin-protein ligase
(Fragment) OS=Setaria italica PE=4
SV=1,79.07,0.000000001,seg,NULL,CUFF.29716.1
         (178 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g007780.2 | armadillo/beta-catenin repeat protein | HC | c...   224   4e-59
Medtr7g007780.1 | armadillo/beta-catenin repeat protein | HC | c...   224   4e-59

>Medtr7g007780.2 | armadillo/beta-catenin repeat protein | HC |
           chr7:1672392-1659373 | 20130731
          Length = 917

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 115/176 (65%), Positives = 123/176 (69%), Gaps = 1/176 (0%)

Query: 1   MARFMAALALSYMFDGRMDEFALAGLMSESISKIAASLDGARKMALKHIETFVHMFXXXX 60
           MARFMAALAL+YMFDGRMDEFAL G MSES+SK +  LDGAR+MALKHIE FV MF    
Sbjct: 741 MARFMAALALAYMFDGRMDEFALVGTMSESVSK-SVGLDGARRMALKHIEAFVRMFSNQQ 799

Query: 61  XXXXXXXXXXXXXXXXVTDGARIQEAGHLRCSGSEIGRFVTMLRNPSPILKSCAAFALLQ 120
                           VT+ ARI EAGHLRCSG+E+GRFVTMLRNPS ILK+CAAFALLQ
Sbjct: 800 AFAAAASSSAPAALAQVTESARILEAGHLRCSGAEVGRFVTMLRNPSSILKACAAFALLQ 859

Query: 121 FTIPGGRHAGHHASLMQNXXXXXXXXXXXXXXXXXXXXKIFARIVLRNLEYHQIEH 176
           FTIPGGRHA HHASLMQ                     KIFARIVLRNLEYH IEH
Sbjct: 860 FTIPGGRHAVHHASLMQKAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHHIEH 915


>Medtr7g007780.1 | armadillo/beta-catenin repeat protein | HC |
           chr7:1672392-1659373 | 20130731
          Length = 917

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 115/176 (65%), Positives = 123/176 (69%), Gaps = 1/176 (0%)

Query: 1   MARFMAALALSYMFDGRMDEFALAGLMSESISKIAASLDGARKMALKHIETFVHMFXXXX 60
           MARFMAALAL+YMFDGRMDEFAL G MSES+SK +  LDGAR+MALKHIE FV MF    
Sbjct: 741 MARFMAALALAYMFDGRMDEFALVGTMSESVSK-SVGLDGARRMALKHIEAFVRMFSNQQ 799

Query: 61  XXXXXXXXXXXXXXXXVTDGARIQEAGHLRCSGSEIGRFVTMLRNPSPILKSCAAFALLQ 120
                           VT+ ARI EAGHLRCSG+E+GRFVTMLRNPS ILK+CAAFALLQ
Sbjct: 800 AFAAAASSSAPAALAQVTESARILEAGHLRCSGAEVGRFVTMLRNPSSILKACAAFALLQ 859

Query: 121 FTIPGGRHAGHHASLMQNXXXXXXXXXXXXXXXXXXXXKIFARIVLRNLEYHQIEH 176
           FTIPGGRHA HHASLMQ                     KIFARIVLRNLEYH IEH
Sbjct: 860 FTIPGGRHAVHHASLMQKAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHHIEH 915