Miyakogusa Predicted Gene

Lj1g3v2938530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2938530.1 tr|A9TYX6|A9TYX6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_99121
,42.59,5e-16, ,NODE_26530_length_476_cov_259.239502.path1.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g101430.2 | DUF3820 family protein | HC | chr2:43612843-43...   176   4e-45
Medtr2g101430.1 | DUF3820 family protein | HC | chr2:43612830-43...   176   4e-45

>Medtr2g101430.2 | DUF3820 family protein | HC |
           chr2:43612843-43615105 | 20130731
          Length = 273

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 88/111 (79%), Positives = 95/111 (85%), Gaps = 1/111 (0%)

Query: 1   MLGSLPSSYLKWVSKNLRAGDSEEWAKLADQVLGDPIYRDRIEWELALNVLNGNSSSSRQ 60
           MLGSLPSSYLKWVSKNLRA + EEWA LADQVL DPIY+DRIEWE ALNVLNGN+ SS  
Sbjct: 61  MLGSLPSSYLKWVSKNLRAREFEEWAILADQVLLDPIYKDRIEWEFALNVLNGNNISSGA 120

Query: 61  PTSTRGGAVSELEEISERFGWDNLDKIGWGKLDFDLLGTSKGGRIPRLVNL 111
             S  G A SEL++ISERFGWDNLDK+GW K+DFDLLGTSKGGRIPRLVN 
Sbjct: 121 AKSI-GAADSELQKISERFGWDNLDKVGWSKVDFDLLGTSKGGRIPRLVNF 170


>Medtr2g101430.1 | DUF3820 family protein | HC |
           chr2:43612830-43615105 | 20130731
          Length = 273

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 88/111 (79%), Positives = 95/111 (85%), Gaps = 1/111 (0%)

Query: 1   MLGSLPSSYLKWVSKNLRAGDSEEWAKLADQVLGDPIYRDRIEWELALNVLNGNSSSSRQ 60
           MLGSLPSSYLKWVSKNLRA + EEWA LADQVL DPIY+DRIEWE ALNVLNGN+ SS  
Sbjct: 61  MLGSLPSSYLKWVSKNLRAREFEEWAILADQVLLDPIYKDRIEWEFALNVLNGNNISSGA 120

Query: 61  PTSTRGGAVSELEEISERFGWDNLDKIGWGKLDFDLLGTSKGGRIPRLVNL 111
             S  G A SEL++ISERFGWDNLDK+GW K+DFDLLGTSKGGRIPRLVN 
Sbjct: 121 AKSI-GAADSELQKISERFGWDNLDKVGWSKVDFDLLGTSKGGRIPRLVNF 170