Miyakogusa Predicted Gene

Lj1g3v2927320.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2927320.2 tr|B9MVA0|B9MVA0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591787 PE=4
SV=1,42.37,0.000000000000001,UPF0565,Uncharacterised protein family
UPF0565,CUFF.29704.2
         (327 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g407140.1 | hypothetical protein | HC | chr7:1110116-11075...   513   e-146
Medtr7g407110.1 | hypothetical protein | LC | chr7:1092731-10909...   196   2e-50
Medtr7g006510.1 | hypothetical protein | HC | chr7:722661-722332...   147   1e-35

>Medtr7g407140.1 | hypothetical protein | HC | chr7:1110116-1107567
           | 20130731
          Length = 401

 Score =  513 bits (1322), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 255/325 (78%), Positives = 273/325 (84%), Gaps = 17/325 (5%)

Query: 1   MERWSGVLRVPLHPNSKAFHRVGASLCLSPETGTLSVPIANAIFFCGDRVEGTGNPVIER 60
           MERWS VLRVPL  NS+ F RVGASLCLS E GTLSVPIANAIFFCGDRVE T NPVIE+
Sbjct: 1   MERWSRVLRVPLLSNSETFLRVGASLCLSSEIGTLSVPIANAIFFCGDRVERTSNPVIEK 60

Query: 61  LSDLQKLSEIVVSKFGSFINAWVIESSVYKGPFAVYKDFIPSVNQYGEPSSYHPIGFPAS 120
           LSDLQKLSEI+VSKFG FINAWVIE+SV+ GPFAVYKDFIPSVNQYGEP SYHP GFPAS
Sbjct: 61  LSDLQKLSEIIVSKFGPFINAWVIEASVFNGPFAVYKDFIPSVNQYGEPRSYHPTGFPAS 120

Query: 121 TSTVSLLSNCLEEVKKVILGKQVDTKFVHTPSCCSSQPKTFILGFSKGGTVLNQIVTELG 180
           TSTVSLLSNCL+EVKK+I  +QVD     TPSCC  QPKT ILGFSKGGTVLNQIVTELG
Sbjct: 121 TSTVSLLSNCLQEVKKIISERQVD-----TPSCCFHQPKTIILGFSKGGTVLNQIVTELG 175

Query: 181 FSDIGSNPYPLDAGQPMDRKISRSEEIYVVPKTKEGLLNSISEIHYVDVGLNSTGAYLTN 240
           F+DIGSN   +D            EEI +VP+TKE LLNSISEIHYVDVGLNSTGAYLTN
Sbjct: 176 FADIGSNVNSVD------------EEISIVPQTKEALLNSISEIHYVDVGLNSTGAYLTN 223

Query: 241 LEVFEGISKRLIQGAPKLRFILHGTPRQWGDKRRDWIRKEKDGMLHLLESEACKSGGKLQ 300
            +VFE ISKRLIQGA KLRF+LHGTPRQW D++RDWIRKEKD ML LLE EA KS GKL+
Sbjct: 224 HDVFERISKRLIQGARKLRFVLHGTPRQWTDEQRDWIRKEKDKMLLLLELEASKSKGKLE 283

Query: 301 VFARYYFADKPSNMQMHFEIIESLD 325
           V +RYYFADK  NMQMHFEIIESLD
Sbjct: 284 VLSRYYFADKLPNMQMHFEIIESLD 308


>Medtr7g407110.1 | hypothetical protein | LC | chr7:1092731-1090938
           | 20130731
          Length = 306

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 94/118 (79%), Positives = 103/118 (87%)

Query: 208 YVVPKTKEGLLNSISEIHYVDVGLNSTGAYLTNLEVFEGISKRLIQGAPKLRFILHGTPR 267
           Y+V KTKE LLNSISEIHYVDVGLNSTGAYLTN +VFE ISKRLIQGA +LRF+LHGT R
Sbjct: 5   YIVLKTKETLLNSISEIHYVDVGLNSTGAYLTNHDVFERISKRLIQGARQLRFVLHGTLR 64

Query: 268 QWGDKRRDWIRKEKDGMLHLLESEACKSGGKLQVFARYYFADKPSNMQMHFEIIESLD 325
           QW D++R WI+KEKD ML LLESEA KSG KL V ARYYF DKP+N+QMHFEIIESLD
Sbjct: 65  QWTDEQRVWIQKEKDKMLLLLESEAGKSGAKLDVLARYYFGDKPTNIQMHFEIIESLD 122


>Medtr7g006510.1 | hypothetical protein | HC | chr7:722661-722332 |
           20130731
          Length = 109

 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/106 (66%), Positives = 84/106 (79%)

Query: 193 AGQPMDRKISRSEEIYVVPKTKEGLLNSISEIHYVDVGLNSTGAYLTNLEVFEGISKRLI 252
           A Q ++  ++  +EI +VPKTKE +LNSISE+HYVDVGLNS GAYL N +VFE ISKRLI
Sbjct: 4   ASQGIESNVNSVDEISIVPKTKETILNSISEVHYVDVGLNSIGAYLANRDVFERISKRLI 63

Query: 253 QGAPKLRFILHGTPRQWGDKRRDWIRKEKDGMLHLLESEACKSGGK 298
            GA +L F+LHGTPR W D++RDWIRKEKD ML LLE EA K+ GK
Sbjct: 64  HGARQLHFVLHGTPRHWTDEQRDWIRKEKDKMLLLLELEAGKTKGK 109