Miyakogusa Predicted Gene

Lj1g3v2923160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2923160.1 tr|B9H692|B9H692_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_558803 PE=4 SV=1,31.52,0.25,
,CUFF.29689.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g029135.1 | hypothetical protein | LC | chr7:10241886-1023...    74   7e-14
Medtr7g029145.1 | hypothetical protein | LC | chr7:10246426-1024...    56   1e-08

>Medtr7g029135.1 | hypothetical protein | LC |
           chr7:10241886-10237238 | 20130731
          Length = 374

 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 46/201 (22%)

Query: 12  DVRCEINPSHGYIFVKGKANPQSILLKLNRGRKHATIEWISYGLRDQDPYQQFQDPANFY 71
           D+  +INPS G  +VKGKA+P  ILL L +G +HAT+EWIS+G+  ++   ++Q   N+ 
Sbjct: 172 DLSYQINPSAGVAYVKGKADPIKILLLLKKGGQHATLEWISHGIPREEK-AKYQGNGNYN 230

Query: 72  NYNFMSHDPYSQYSR-YPYDTSY--------------------------NPYSYDMAQGA 104
           N+  +  DP+   +  YPYD +                           NP  ++M Q A
Sbjct: 231 NHMMIPQDPFYHGTFPYPYDHNGYHQFNHPYPNPNWYNMPQNTHQFNHPNPNWHNMPQNA 290

Query: 105 LPYGDNH--VHEYDPSGHCEGRN--SGQLHNSHCSVHS-QHHNTPESSQSGGISQMRNRS 159
            PYG++H   H++      E R+  SG   +SH  + S  HH+ P SS    I       
Sbjct: 291 FPYGNHHGFEHQHGTRNMFEDRSIPSGSF-DSHGPMRSNNHHDDPGSSSQPYI------- 342

Query: 160 PPSFDPQENNSQANNQPAPKK 180
                P E N+Q ++QP P K
Sbjct: 343 -----PPETNNQTDDQPQPAK 358


>Medtr7g029145.1 | hypothetical protein | LC |
           chr7:10246426-10247211 | 20130731
          Length = 207

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 81/180 (45%), Gaps = 32/180 (17%)

Query: 12  DVRCEINPSHGYIFVKGKANPQSILLKLNRGRKHATIEWISYGLRDQDPYQQFQDPANFY 71
           D+   IN   G+ ++KGK +PQ +L KL +  KH T+EW SY           ++  N Y
Sbjct: 37  DLSYNINQPAGFAYLKGKVDPQKLLSKLRKAEKHVTLEWSSYVF-------HIENQGNGY 89

Query: 72  -NYNFMSHDPYSQYSRYPYDTSY------NPYSYDMAQGALPYGDNHVHEYDPSGH--CE 122
            N++F+   P+     YPYD +       NP   +M Q  LPY   H  E   S     E
Sbjct: 90  NNHHFIPQGPFYTIG-YPYDPNVYQFNHPNPNWNNMPQYGLPY---HAPERQHSTEHMFE 145

Query: 123 GRNSGQLHNSHCS-VHSQHHNTPESSQSGGISQMRNRSPPSFDPQENNSQANNQPAPKKS 181
           G +     +   S V S HH           S + N S P   P ENN+Q N+QPA + S
Sbjct: 146 GTSFSSQSSDSQSPVRSNHHQ----------SDVGNSSLPVIQP-ENNNQTNDQPAQRSS 194