Miyakogusa Predicted Gene

Lj1g3v2922980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2922980.1 Non Characterized Hit- tr|A5B973|A5B973_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,55,2e-18,
,CUFF.29684.1
         (81 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g074580.1 | hypothetical protein | LC | chr3:33716237-3371...    84   4e-17
Medtr6g075040.1 | hypothetical protein | LC | chr6:27711298-2771...    84   4e-17

>Medtr3g074580.1 | hypothetical protein | LC |
           chr3:33716237-33715815 | 20130731
          Length = 140

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 45/53 (84%)

Query: 2   ESDSWSWEDENKSEFQEENENVDDEPVRGTRLLSEVYQRCNLAVMEPAGYEEA 54
           E DSW+WED  K EFQEENE+VD EPVRGTR LS++YQRCN+A MEP GY++A
Sbjct: 68  ELDSWNWEDCEKFEFQEENEDVDVEPVRGTRSLSDIYQRCNVAFMEPEGYDKA 120


>Medtr6g075040.1 | hypothetical protein | LC |
           chr6:27711298-27712398 | 20130731
          Length = 152

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 47/54 (87%)

Query: 1   MESDSWSWEDENKSEFQEENENVDDEPVRGTRLLSEVYQRCNLAVMEPAGYEEA 54
           +ESDSW+WED  K EFQEENE+VDDEP++GTR LS++YQRCN+ VME  GY++A
Sbjct: 67  LESDSWNWEDCEKFEFQEENEDVDDEPIKGTRSLSDMYQRCNVVVMELEGYDKA 120