Miyakogusa Predicted Gene

Lj1g3v2908520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2908520.1 Non Characterized Hit- tr|A5AWF7|A5AWF7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.46,0.0000001,PRA1,Prenylated rab acceptor PRA1;
seg,NULL,CUFF.29658.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g092700.1 | PRA1 family protein | HC | chr7:36770328-36771...   235   2e-62
Medtr7g092710.1 | PRA1 family protein | HC | chr7:36772643-36773...   218   3e-57
Medtr7g081655.1 | PRA1 family protein | HC | chr7:31312648-31312...   194   3e-50
Medtr6g092690.1 | PRA1 (prenylated RAB acceptor) family protein ...    48   4e-06

>Medtr7g092700.1 | PRA1 family protein | HC | chr7:36770328-36771788
           | 20130731
          Length = 200

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/185 (65%), Positives = 139/185 (75%), Gaps = 8/185 (4%)

Query: 1   MANFGTTQRLXXXXXXXXXDNNYEAKDKLYHE---FKFKFYCPIDIPSTSEATAVRILKN 57
           MAN GTTQR+               + K  HE      KFYCPI+IP T +A A RI++N
Sbjct: 1   MANLGTTQRILPTSSKPSSPTTDTHEPKSPHEKLYADLKFYCPINIPLTQDAAASRIIRN 60

Query: 58  FTNLGLYYTLFVWIILFITLIPERKVSLILLVIMTYVTTVYCLILRSCPNSVLLHRIIDK 117
             NLGLYYTLF+WIILFITLIPERKVSLILLVIMTYVTT+YCL+LR+CPNSV+LHRIIDK
Sbjct: 61  LGNLGLYYTLFIWIILFITLIPERKVSLILLVIMTYVTTLYCLLLRACPNSVVLHRIIDK 120

Query: 118 RFVLCLLAIATSVQLVLTEAGIHLAVTLASSMPVVLLHAVLWAG---YDAYEIENVSGAG 174
           R VL LL IAT++QL+LTEAGIH AVTL  S+PVVLLHAVLWAG   YDAYE E   G+G
Sbjct: 121 RIVLSLLFIATAIQLILTEAGIHFAVTLTCSVPVVLLHAVLWAGSYEYDAYETEE--GSG 178

Query: 175 YESVA 179
            E +A
Sbjct: 179 KEELA 183


>Medtr7g092710.1 | PRA1 family protein | HC | chr7:36772643-36773544
           | 20130731
          Length = 199

 Score =  218 bits (554), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 133/176 (75%), Gaps = 6/176 (3%)

Query: 1   MANFGTTQRLXXXXXXXXXDNNYEAK---DKLYHEFKFKFYCPIDIPSTSEATAVRILKN 57
           MAN GTTQR+          + YE K   +KLY  FKF  YCPI++P T E  A RI++N
Sbjct: 1   MANLGTTQRIPTSKPSSPTTDTYEPKSPHEKLYANFKF--YCPINLPLTQEVAASRIIRN 58

Query: 58  FTNLGLYYTLFVWIILFITLIPERKVSLILLVIMTYVTTVYCLILRSCPNSVLLHRIIDK 117
             ++GLYYTLF+W+ILFITLIP++KVSLILL+IMTYVTT+YCLILRSCPNS LLHRIIDK
Sbjct: 59  LKHIGLYYTLFIWMILFITLIPDQKVSLILLLIMTYVTTLYCLILRSCPNSHLLHRIIDK 118

Query: 118 RFVLCLLAIATSVQLVLTEAGIHLAVTLASSMPVVLLHAVLW-AGYDAYEIENVSG 172
           + VL  L IAT++QL++T+AG H A+T   S+PVVLLHAVLW + YD YE +  SG
Sbjct: 119 KIVLTFLVIATAIQLIMTDAGTHFAITSTCSVPVVLLHAVLWDSSYDGYETKEGSG 174


>Medtr7g081655.1 | PRA1 family protein | HC | chr7:31312648-31312052
           | 20130731
          Length = 198

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 102/175 (58%), Positives = 126/175 (72%), Gaps = 6/175 (3%)

Query: 1   MANFGTTQRLXXXXXX-XXXDNNYEAK---DKLYHEFKFKFYCPIDIPSTSEATAVRILK 56
           MAN  T  R              Y+ K   +KLY +FK  F  P  IP TSEA A+R+++
Sbjct: 1   MANHATKHRTQTKPTTPSSISETYQPKNPHEKLYTDFKIYF--PFSIPLTSEAAAIRVIR 58

Query: 57  NFTNLGLYYTLFVWIILFITLIPERKVSLILLVIMTYVTTVYCLILRSCPNSVLLHRIID 116
           N  NLGLYYTLFVWIILFI LIP  K SLILLVIMTYV T+Y L+LR+CPN+V+LHR +D
Sbjct: 59  NIENLGLYYTLFVWIILFIILIPHHKTSLILLVIMTYVITIYHLLLRACPNNVVLHRRVD 118

Query: 117 KRFVLCLLAIATSVQLVLTEAGIHLAVTLASSMPVVLLHAVLWAGYDAYEIENVS 171
           KRFVLC+L  AT VQL+LT+AGI LAVTLA ++P+VL+HAVLW  +  +E+E+VS
Sbjct: 119 KRFVLCVLVFATIVQLILTDAGIRLAVTLACAVPLVLVHAVLWVSHYVFEVEDVS 173


>Medtr6g092690.1 | PRA1 (prenylated RAB acceptor) family protein |
           HC | chr6:34903018-34902413 | 20130731
          Length = 201

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 3/130 (2%)

Query: 43  IPSTSEATAVRILKNFTNLGLYYTLFVWIILFITLIPERKVSLILLVIMTYVTTVYCLIL 102
           +PS+   T  RI  N  +    Y + + + +F++L+ E  +SLI+L++M  +  VY   L
Sbjct: 50  LPSSFYDTIQRINTNAKHFRANYVITMLLTIFLSLL-EHPISLIILIVMM-IAWVYLYFL 107

Query: 103 RSCPNSVLLHRIIDKRFVLCLLAIATSVQLVLTEAGIHLAVTLASSMPVVLLHAVLWAGY 162
           R  P  +  + I ++  V+ LL+I   + LVLT+   ++ V +  ++ VVL+HAVL    
Sbjct: 108 RVTPLVIFGYEIDERYVVISLLSITAGL-LVLTDVTHNVEVGMCFALGVVLIHAVLRETE 166

Query: 163 DAYEIENVSG 172
           D + ++   G
Sbjct: 167 DLFTLDEDVG 176