Miyakogusa Predicted Gene

Lj1g3v2897300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2897300.1 Non Characterized Hit- tr|E1ZIF3|E1ZIF3_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,44.04,2e-18,DUF1279,Domain of unknown function DUF1279;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL,CUFF.29651.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g081070.1 | DUF1279 family protein | HC | chr7:30915702-30...   209   5e-55
Medtr7g081070.2 | DUF1279 family protein | HC | chr7:30915617-30...   209   5e-55

>Medtr7g081070.1 | DUF1279 family protein | HC |
           chr7:30915702-30914809 | 20130731
          Length = 127

 Score =  209 bits (532), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 114/127 (89%), Gaps = 2/127 (1%)

Query: 1   MAGGRFRELMKKYGKVAVGVHLSVSGASITTLYVAIRNNVDVEAILEKFHLGAASPEQNP 60
           M+GGRFREL+KKYGKVA+GVH SVS AS+  +YVAIRNNVDVEAILEKFHLGAASPE+NP
Sbjct: 1   MSGGRFRELLKKYGKVAIGVHCSVSAASVAGIYVAIRNNVDVEAILEKFHLGAASPEENP 60

Query: 61  SI--DTVSDAPQTKSRTAQMAASAGGAFTLAILCNKALFPVRVPLTIALTPPIARFLARR 118
           ++  DT S A   K+RTAQMAASAGGAFTLA+LCNKAL PVRVP+TIALTPPIARFLARR
Sbjct: 61  NLNSDTDSSAVPVKNRTAQMAASAGGAFTLAVLCNKALIPVRVPITIALTPPIARFLARR 120

Query: 119 NIVKTGV 125
            IVKTGV
Sbjct: 121 KIVKTGV 127


>Medtr7g081070.2 | DUF1279 family protein | HC |
           chr7:30915617-30913276 | 20130731
          Length = 127

 Score =  209 bits (532), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 114/127 (89%), Gaps = 2/127 (1%)

Query: 1   MAGGRFRELMKKYGKVAVGVHLSVSGASITTLYVAIRNNVDVEAILEKFHLGAASPEQNP 60
           M+GGRFREL+KKYGKVA+GVH SVS AS+  +YVAIRNNVDVEAILEKFHLGAASPE+NP
Sbjct: 1   MSGGRFRELLKKYGKVAIGVHCSVSAASVAGIYVAIRNNVDVEAILEKFHLGAASPEENP 60

Query: 61  SI--DTVSDAPQTKSRTAQMAASAGGAFTLAILCNKALFPVRVPLTIALTPPIARFLARR 118
           ++  DT S A   K+RTAQMAASAGGAFTLA+LCNKAL PVRVP+TIALTPPIARFLARR
Sbjct: 61  NLNSDTDSSAVPVKNRTAQMAASAGGAFTLAVLCNKALIPVRVPITIALTPPIARFLARR 120

Query: 119 NIVKTGV 125
            IVKTGV
Sbjct: 121 KIVKTGV 127