Miyakogusa Predicted Gene

Lj1g3v2897290.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2897290.1 Non Characterized Hit- tr|I1N439|I1N439_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16382
PE,97.64,0,SNARE-like,Longin-like domain; Sedlin_N,Sedlin; no
description,NULL; UNCHARACTERIZED,NULL; MBP-1 INT,CUFF.29648.1
         (127 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g081040.1 | trafficking protein particle complex subunit-l...   263   4e-71
Medtr7g081040.2 | trafficking protein particle complex subunit-l...   200   3e-52

>Medtr7g081040.1 | trafficking protein particle complex subunit-like
           protein | HC | chr7:30901653-30897385 | 20130731
          Length = 143

 Score =  263 bits (671), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 125/127 (98%), Positives = 127/127 (100%)

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG 60

Query: 61  LLYPIENYKVYGYLTNTKVKFILVTTDLDVKDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPIENYKVYGYLTNTKVKFILVTTD+DVKDADVRNFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPIENYKVYGYLTNTKVKFILVTTDIDVKDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSRTYA 127
           ITSRT+A
Sbjct: 121 ITSRTFA 127


>Medtr7g081040.2 | trafficking protein particle complex
          subunit-like protein | HC | chr7:30901657-30897446 |
          20130731
          Length = 115

 Score =  200 bits (508), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/97 (98%), Positives = 97/97 (100%)

Query: 1  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG 60
          MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG
Sbjct: 1  MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLG 60

Query: 61 LLYPIENYKVYGYLTNTKVKFILVTTDLDVKDADVRN 97
          LLYPIENYKVYGYLTNTKVKFILVTTD+DVKDADVRN
Sbjct: 61 LLYPIENYKVYGYLTNTKVKFILVTTDIDVKDADVRN 97