Miyakogusa Predicted Gene

Lj1g3v2862520.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2862520.2 tr|F4J9G6|F4J9G6_ARATH LETM1-like protein
OS=Arabidopsis thaliana GN=At3g59820 PE=4
SV=1,70.31,7e-18,EF-hand,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain,CUFF.29621.2
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g080610.1 | leucine zipper EF-hand transmembrane protein |...   157   3e-39
Medtr8g088580.1 | leucine zipper EF-hand transmembrane protein |...   145   1e-35

>Medtr7g080610.1 | leucine zipper EF-hand transmembrane protein | HC
           | chr7:30692728-30686809 | 20130731
          Length = 766

 Score =  157 bits (396), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/91 (90%), Positives = 84/91 (92%), Gaps = 1/91 (1%)

Query: 1   MLHTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVQSAAMYLKDTLGKEGIQELISNLS 60
           ML TLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEV SAAMYLKDTLGKEGIQELISNLS
Sbjct: 676 MLQTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVVSAAMYLKDTLGKEGIQELISNLS 735

Query: 61  KDSDGKILVEDIVRLGIQ-KEDADAEEVRRS 90
           KD DGKILVEDIV+LG Q KEDAD +EV RS
Sbjct: 736 KDIDGKILVEDIVKLGTQKKEDADKDEVGRS 766


>Medtr8g088580.1 | leucine zipper EF-hand transmembrane protein | HC
           | chr8:36753568-36744494 | 20130731
          Length = 724

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 76/86 (88%)

Query: 1   MLHTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVQSAAMYLKDTLGKEGIQELISNLS 60
           ML  LEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEV SAAMYLK+TLGKEG+QEL+SNLS
Sbjct: 635 MLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKNTLGKEGVQELVSNLS 694

Query: 61  KDSDGKILVEDIVRLGIQKEDADAEE 86
           KD DGKILVEDIV+LG  +ED    E
Sbjct: 695 KDKDGKILVEDIVKLGGWREDGHTAE 720