Miyakogusa Predicted Gene

Lj1g3v2842390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2842390.1 Non Characterized Hit- tr|I1L673|I1L673_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52547 PE,53.7,0,COHESIN
SUBUNIT RAD21,NULL; SCC1 / RAD21 FAMILY MEMBER,NULL; no
description,Rad21/Rec8-like protein,,CUFF.29694.1
         (1276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g080575.1 | sister chromatid cohesion 1 protein | HC | chr...  1577   0.0  
Medtr3g005770.1 | sister chromatid cohesion 1 protein | HC | chr...   162   3e-39
Medtr4g061370.1 | Myb/SANT-like DNA-binding domain protein | LC ...   105   3e-22
Medtr5g081270.1 | sister chromatid cohesion 1 protein | HC | chr...    96   3e-19
Medtr7g031420.1 | sister chromatid cohesion 1 protein | HC | chr...    94   1e-18
Medtr3g026750.1 | Rad21/Rec8-like protein, amine-terminal protei...    70   1e-11
Medtr5g083120.1 | sister chromatid cohesion 1 protein, putative ...    63   2e-09

>Medtr7g080575.1 | sister chromatid cohesion 1 protein | HC |
            chr7:30681072-30668024 | 20130731
          Length = 1371

 Score = 1577 bits (4083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 849/1407 (60%), Positives = 985/1407 (70%), Gaps = 167/1407 (11%)

Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+VPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVNYLFDDCSEALLKVKQAFRS AVDLPPEESTAPY+SITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYNSITLPETFDLDDFE 120

Query: 121  LPDNDISQGNYVDHHVSSREQITLQDNMEGVVYTASQFGLDERFGDGDASQIGFDLDEVL 180
            LPD+DI QGNYVD HVSS+EQITLQD +EG+VY  SQFGLDERFGDGDASQIG DLDEV+
Sbjct: 121  LPDSDIFQGNYVDRHVSSKEQITLQDTLEGMVYKTSQFGLDERFGDGDASQIGLDLDEVM 180

Query: 181  LGDKAAAMDHDGLSANPDASHKNDDNNEE------------------------------L 210
            L DK   ++H+  SANP  SH+ D+  EE                              +
Sbjct: 181  LIDKDVTLEHNDFSANPQLSHQEDEKKEEDMLIDNEATLEHEDFSANPQVSHLEDEMKEV 240

Query: 211  RGTSDRMQVEDSGSKNDLIDGQPSLAEVSEYAQGPSTPGLQEPNLFGTQVDQVNDEADCN 270
             G SDRMQVEDSGSK DLIDG P+ AE  EYAQGPSTPGLQEPNLFGTQ DQV +EA+ +
Sbjct: 241  GGASDRMQVEDSGSKIDLIDGLPTTAEFHEYAQGPSTPGLQEPNLFGTQADQVINEANFH 300

Query: 271  NSADLVTMKIEQKESSAHQMENDVVDCSTQNNGEHVGVDLHHGDSDCIMVEVDSKRE--- 327
            NSADL++M+  Q ESSAHQ ENDV+ CS QNN +HVGVDLHH  SDC++ EVD KRE   
Sbjct: 301  NSADLLSMETTQNESSAHQTENDVIGCSLQNNEKHVGVDLHHEASDCVLAEVDDKREEPE 360

Query: 328  -----DKEHMASKVVTKD---------------QENFIPDDHCSTLAPLLDSSNKDPPTT 367
                 D+EH AS  V  +               QEN I +DHC    PL++SSNKD  TT
Sbjct: 361  HFKRTDQEHEASDCVLAEVDDKREEPEHLKRTEQENLILNDHCLASVPLMESSNKDHTTT 420

Query: 368  ISPESAGGMIDSSNMPEKVEDLHDRVLMNDEPTVVPSEHHVNVVPEGVSVNEAVASSSYS 427
            + PE A G++D+S + EKVE+LHD VLM+ EP +  S   VNV   GV +N+ + S S S
Sbjct: 421  MLPECASGLVDASGILEKVENLHDGVLMDTEPVIAASNETVNVFSGGVGINDTIVSPSCS 480

Query: 428  HATSDQENLSFQMLANVDGSMGLESGCHLEDDNTLSKHEVLNDTEISKGEGQPDPIEEAQ 487
            H TS+Q+ LS ++L NVDGS G E   HL DDNTL+KHEV N +EIS+ E +P  ++EAQ
Sbjct: 481  HVTSEQDGLSCKLLPNVDGSHGYEFDGHLVDDNTLTKHEVSNSSEISRNEERPCVVDEAQ 540

Query: 488  VSNIISPLGSPGRPEVVDLEAQASQEPKEIETSNHVSLEAQEPTESYLRPCTYHQSQPSL 547
            VSNI+S L S GRPEVVD+EAQAS+E KE    NHVS EA++PTESYLRPCT H +  S 
Sbjct: 541  VSNIVSSLESSGRPEVVDVEAQASRELKEAVVLNHVSHEAEQPTESYLRPCTSHINHHSQ 600

Query: 548  SPIEGEKRHETDVSAPALGSHETLEPSVHKEKPDLGESG----------------KSAAS 591
              IEGE  H  DVS PALG+H+T+EPS  +   DL +SG                +S AS
Sbjct: 601  LSIEGENCHAMDVSDPALGNHDTVEPSACEGMLDLEQSGMQAGSQMISNKTGSLNESTAS 660

Query: 592  DMPEPEKMLSLAYQHDGEANNLVLESTPVNQSISEGHTDAAGVTCISGKKRSFTESTLTM 651
            D+PEPEKMLS AYQHD E N+L+LESTP NQ ISEG+T+AAGVT ISGKKRS+TESTLTM
Sbjct: 661  DIPEPEKMLS-AYQHDNEMNHLLLESTPGNQGISEGNTNAAGVTSISGKKRSYTESTLTM 719

Query: 652  QSVDLVESYGGAQSKRTAEXXXXXXXXXXXXXAGKRSSVLKIKPSPAAPEIASTKRFRSG 711
            QS+DLVESYGGAQSKRTAE              G++SS  KIKPSPAA E  STKR RS 
Sbjct: 720  QSMDLVESYGGAQSKRTAESIPDDDDLLSSILVGRKSSAFKIKPSPAAREKPSTKRLRST 779

Query: 712  SRSSAIKRKVLMDDVMVLHGDTIRQQLTSTEDIRRVRKKAPCTRHEILMIQRQFLEDEIF 771
             R+S +KRKVLMDD+MVLHGDTIRQQLTSTEDIRRVRKKAPCTR EILMIQRQFLED+IF
Sbjct: 780  PRTSTVKRKVLMDDMMVLHGDTIRQQLTSTEDIRRVRKKAPCTRDEILMIQRQFLEDQIF 839

Query: 772  HEPILTDLSSDLTVLRSDTFDLTRIKVSDSGLDSSSLEKTNDQESYSRTN---------- 821
            H+PI TD+S+DLT+L+++T DL+RIKV  +GLDS SLEK NDQESYS+TN          
Sbjct: 840  HKPIFTDVSADLTILQNETLDLSRIKVCHNGLDSLSLEKGNDQESYSKTNAKTHGVEEHN 899

Query: 822  -------------------TESHGVE---------------------------LEGNDEP 835
                                E+HGVE                           +E ++EP
Sbjct: 900  EPMAVQPQENAEESYSKTNAETHGVEAHNEPMAVQPQEDAEESFSKTNAEIHGVEAHNEP 959

Query: 836  MAVQHQENTAAQPTEIPILSESHQSEVNTVYH-DINALEHPNTISG---LDSSQNAEMNN 891
             A+Q QE+  AQP+EIP+ SE HQSEV+   H +I A  H N IS    L  SQ AEMNN
Sbjct: 960  TAIQPQEDAEAQPSEIPVPSECHQSEVDFGSHNNIEAHGHTNIISDVRELGCSQTAEMNN 1019

Query: 892  AGRNVEVSEAENCSVAPGIEPSALTELFENDLCVPNDFVATLPLIDETNDRGDSIHTTPL 951
            AG N E+S AEN S  PG E  +LTE+FEN+LC PN F A+LPL+D+T+D   SIHT  L
Sbjct: 1020 AGINFEISSAENYSFVPGHETLSLTEVFENELCRPNFFDASLPLMDKTDDLVGSIHTDML 1079

Query: 952  SEPTAQNMNAFPFPEDEFVEDYWDRSEVGAVKIAEANMEIRTQVLTDCVEADDLCPSSAP 1011
            S PT+Q M++ P  E+EF ED  DR+  GA +IAE  MEIRTQV TD +EAD L  S   
Sbjct: 1080 SIPTSQKMDSSPMLENEFAEDQHDRNNAGATEIAENAMEIRTQVETDSLEADHLYASM-- 1137

Query: 1012 GSVEIAGQAMEIRTQVLTDGVEANDLCPSPAPGSKETDEHADNQALFNGDILMEESGKCM 1071
                                          A GSKE +E+ DNQ  +NGD+ +EE+G  M
Sbjct: 1138 ------------------------------ATGSKEANEYTDNQVFYNGDLPVEENGNNM 1167

Query: 1072 VGGVNEDQIVSSGLGCDDKGAKSDYIFSETTKVDCLHSVALDLDENRSSLNDEEDPVCQE 1131
            +GG+NEDQI+S GLGCDDK AKS  +FSE  +VDCLHS AL    N SSLNDEE+PVCQE
Sbjct: 1168 LGGLNEDQIISPGLGCDDKDAKSGGLFSENVEVDCLHSAALI---NESSLNDEENPVCQE 1224

Query: 1132 VALQSTMCPEASAVQSPFVDQKDDDDMVANDTGFLNVGXXXXXXXXXXXX--FMPAAEGT 1189
             ALQ+TM P+ SA++SPF DQ D+++M   DTGFLNVG              F   AEGT
Sbjct: 1225 AALQNTMYPDVSAIRSPFADQTDENNMGGIDTGFLNVGDDEIIEDDDDDAGGFASGAEGT 1284

Query: 1190 HLENSGWSSRTRAVAKYLQTSFDKEDRQGRKNLKLDNILAGKTRKEASRMFFETLVLKTR 1249
            HLENSGWSSRTRAVAKYLQT FDKE+  GR+NL LDNILAGKTRKEASRMFFETLVLKTR
Sbjct: 1285 HLENSGWSSRTRAVAKYLQTLFDKEELHGRQNLHLDNILAGKTRKEASRMFFETLVLKTR 1344

Query: 1250 DYVHVEQAEPYDNIDLKPRPKLMKADF 1276
            DYVHVEQA+P+ NI+L+PR KLMK +F
Sbjct: 1345 DYVHVEQAKPFANINLQPRKKLMKTNF 1371


>Medtr3g005770.1 | sister chromatid cohesion 1 protein | HC |
           chr3:375395-369758 | 20130731
          Length = 701

 Score =  162 bits (409), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/340 (34%), Positives = 174/340 (51%), Gaps = 54/340 (15%)

Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFYSQ  LA+KGPL T+WIAAHL+ +L+K+Q A TDI  +V  I+ P VPIALR+S+HLL
Sbjct: 1   MFYSQTFLARKGPLSTVWIAAHLQHRLKKSQYASTDIPSTVQHIMDPGVPIALRMSAHLL 60

Query: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSTAVDLPPEES-TAPYHSITLPETFDLDDF 119
           LGVVRIYS+KV+YL +DC+     + + F S + +  PE++  AP H+IT+P TFDLD  
Sbjct: 61  LGVVRIYSKKVDYLLNDCNLVRTVLYKVFASVSNNTLPEDARQAPVHTITMPATFDLDAL 120

Query: 120 ELPDNDISQGNYVDHHVSSREQITLQDNMEGVV--YTASQFGLDERFGDGDA-----SQI 172
            L   +I    Y D H+ S+++ITL D    VV  Y A +F  D  F   +A     S+ 
Sbjct: 121 NL-GYEIDFNGYEDAHIRSQDEITLADRSPIVVDNYVAIRFDEDIPFSPSNAQPLPDSEA 179

Query: 173 GFDLDEVLLGDKAAAMDHDGLSANPDA-------SHKNDDNN--------------EELR 211
             + +E +    ++    D     P +       SH +DDNN              E LR
Sbjct: 180 RPNEEEFIPQSPSSTRVVDVQDGGPSSHIESHTTSHTSDDNNHIFQDPVTKQTLPPESLR 239

Query: 212 GTSD------------RMQVEDSGSKNDLI--------DGQPSLAEVSEYAQGPSTPGLQ 251
             S+             + V +     ++I          QP+     + +QG    G  
Sbjct: 240 DPSNDAVENIPTDMDIDITVHEKDQTPEMIPEIHAETPPTQPARPPTPDASQG----GAS 295

Query: 252 EPNLFGTQVDQVNDEADCNNSADLVTMKIEQKESSAHQME 291
           +  + G  + + +  +   ++A L T ++EQ +SS HQME
Sbjct: 296 DGQVHGGPISEPSLRSCSFDAAMLPTPQMEQGQSSTHQME 335



 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 2/80 (2%)

Query: 1197 SSRTRAVAKYLQ--TSFDKEDRQGRKNLKLDNILAGKTRKEASRMFFETLVLKTRDYVHV 1254
            S RTR +A+YL+  +       Q  ++  L+ IL GKTRK A+RMFFE LVLKT D + V
Sbjct: 620  SGRTRGLAQYLKDYSPCTTIPEQPAEDFSLNKILDGKTRKIAARMFFEVLVLKTHDLIDV 679

Query: 1255 EQAEPYDNIDLKPRPKLMKA 1274
            +Q EPY +I  K  P L KA
Sbjct: 680  QQEEPYGDISFKLTPALDKA 699


>Medtr4g061370.1 | Myb/SANT-like DNA-binding domain protein | LC |
           chr4:22691367-22696834 | 20130731
          Length = 1316

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 4/92 (4%)

Query: 259 QVDQVNDEADCNNSADLVTMKIEQKESSAHQMENDVVDCSTQNNGEHVGVDLHHGDSDCI 318
           + D V +EAD +NS  L++M+ EQ ES AHQ EN V+ CS QNNG+HVGVDLHH  SDC+
Sbjct: 180 EADHVINEADFHNSTYLLSMETEQNESYAHQTENHVIGCSLQNNGKHVGVDLHHEASDCV 239

Query: 319 MVEVDSKREDKEHMASKVVTKDQENFIPDDHC 350
           + EVD K+E++EH+        QEN IP+ HC
Sbjct: 240 LAEVDDKQEEQEHLKLTY----QENLIPNHHC 267


>Medtr5g081270.1 | sister chromatid cohesion 1 protein | HC |
           chr5:34817605-34814956 | 20130731
          Length = 231

 Score = 95.9 bits (237), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 78/127 (61%), Gaps = 6/127 (4%)

Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P +P+ALRLS  L+
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRKKLNKLNIIKICEEILNPAIPMALRLSGILM 60

Query: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSTAVD----LPPEESTAPYHSITLP--ETF 114
            GVV +Y RKV  L+DD S  L+++ +A++  +V     LP  +S A   +ITLP  E  
Sbjct: 61  GGVVIVYERKVKLLYDDVSRLLVEINEAWKVKSVPDHTLLPKGKSQAKRAAITLPGKEQM 120

Query: 115 DLDDFEL 121
            L++ EL
Sbjct: 121 TLEELEL 127


>Medtr7g031420.1 | sister chromatid cohesion 1 protein | HC |
           chr7:10945596-10952129 | 20130731
          Length = 773

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 35/190 (18%)

Query: 7   ILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDV-PIALRLSSHLLLGVVR 65
           + + K PL   W+AA   ++L+K Q+ D+DI  +VD IL  ++  ++ RL  +LL GVV+
Sbjct: 8   LCSSKNPL---WVAAFFFKQLKKAQILDSDISSAVDQILHHEMDAVSYRLLGYLLSGVVK 64

Query: 66  IYSRKVNYLFDDCSEALLKVKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFEL--PD 123
           IYS++V YL DDC++ L  + +    T  + P E+      S  +PETFDLD  +L  P+
Sbjct: 65  IYSKQVEYLLDDCNKVLFGINKFVIKTKSNTPVEKLRM---SFIMPETFDLDAIDLGTPE 121

Query: 124 NDISQGNYVDHHVSSREQITLQD---NMEGVVYTASQFGLDERFGDGDASQIGFDLDEVL 180
            D S+      H +  EQITL+D   N  G +    QF   ERF            D+  
Sbjct: 122 -DTSR-----FHTALPEQITLKDVLSNTAGFM----QFS-QERF------------DDFG 158

Query: 181 LGDKAAAMDH 190
           LG+ + ++DH
Sbjct: 159 LGETSCSLDH 168



 Score = 80.5 bits (197), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 1/82 (1%)

Query: 1194 SGWSSRTRAVAKYLQTSFDKEDRQGRK-NLKLDNILAGKTRKEASRMFFETLVLKTRDYV 1252
            SGWS RTR VA YL  SF    +Q    ++ L  +  G+TRKE++R+F+E LVLKT +YV
Sbjct: 689  SGWSERTRKVASYLSKSFQDAGKQKESGSVNLSQVSQGRTRKESARLFYEILVLKTTNYV 748

Query: 1253 HVEQAEPYDNIDLKPRPKLMKA 1274
             V+Q E Y +I +K  PKL K 
Sbjct: 749  DVQQNEAYGDIAVKKLPKLDKT 770


>Medtr3g026750.1 | Rad21/Rec8-like protein, amine-terminal protein |
           LC | chr3:8233666-8232118 | 20130731
          Length = 195

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 8/105 (7%)

Query: 23  LERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEAL 82
           ++ K++K++    DI  +V+ IL   VP++LRLS+ LL GVVRIYS+KV+ +  DC+   
Sbjct: 3   MDEKIKKSKYHSVDIKSTVNHILKVSVPVSLRLSAILLFGVVRIYSKKVDNVLSDCNNIQ 62

Query: 83  LKVKQAFRSTAVDLPP------EESTAPYHSITLPETFDLDDFEL 121
            ++ + +    + LP       +   A  ++ITLPE F LD+ +L
Sbjct: 63  KRLLKVY--PVIILPKNTMAMGDSKVAARNAITLPENFQLDELDL 105


>Medtr5g083120.1 | sister chromatid cohesion 1 protein, putative |
           LC | chr5:35867520-35862679 | 20130731
          Length = 575

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)

Query: 19  IAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDC 78
           +AA +  K+ + ++   +I    + IL P +P+ALRLS  L+ GVV +Y RKV  L+DD 
Sbjct: 1   MAATMHAKINRKKLNKLNIIKICEEILNPAIPMALRLSGILMGGVVIVYERKVKLLYDDV 60

Query: 79  SEALLKVKQAFR-STAVD---LPPEESTAPYHSITLP 111
           S  L+++ +A++  +A D   LP  +S A  + IT+P
Sbjct: 61  SRLLVEINEAWKVKSAPDPTVLPKGKSQAKRNEITIP 97