Miyakogusa Predicted Gene

Lj1g3v2838150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2838150.1 Non Characterized Hit- tr|I3RZK7|I3RZK7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.71,0,BIOTIN,Biotin-binding site; Single hybrid motif,Single
hybrid motif; seg,NULL; BIOTINYL_LIPOYL,Bioti,CUFF.29588.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g080290.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   124   3e-29
Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   117   4e-27
Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase...   108   9e-25

>Medtr7g080290.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:30536157-30530313 | 20130731
          Length = 276

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/131 (54%), Positives = 79/131 (60%), Gaps = 3/131 (2%)

Query: 1   MPQLQSALQPAVFYSPPSPTMXXXXXXXXXXXXXXXXXXXXXXXLAIKSAKSSHPPLKSP 60
           MPQ + A QPAV YS PS T                          +    SS PPLKSP
Sbjct: 149 MPQPEYAPQPAVLYSQPSQTAPPVAPSHTLALPAPSTPISPPP---VNLTTSSRPPLKSP 205

Query: 61  MAGTFYRSPAPGEPAFXXXXXXXXXXXXLCIIEAMKLMNEIEADQSGTVVDVIAEDGKSV 120
           MAGTFYRSPAPGEP F            +CIIEAMKLMNEIEAD+SGT+V++IAED K V
Sbjct: 206 MAGTFYRSPAPGEPPFVKVGDEVKKGQVVCIIEAMKLMNEIEADKSGTIVEIIAEDAKPV 265

Query: 121 SVDTPLFVIEP 131
           SVDTPLFVIEP
Sbjct: 266 SVDTPLFVIEP 276


>Medtr6g015020.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr6:4863345-4867174 | 20130731
          Length = 278

 Score =  117 bits (292), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 55/84 (65%), Positives = 62/84 (73%)

Query: 48  KSAKSSHPPLKSPMAGTFYRSPAPGEPAFXXXXXXXXXXXXLCIIEAMKLMNEIEADQSG 107
           K++ SSHPPLK PMAGTFYR P PGEP F            +CIIEAMKLMNEIEADQSG
Sbjct: 195 KTSASSHPPLKCPMAGTFYRCPGPGEPPFVQVGDTVQKGQVICIIEAMKLMNEIEADQSG 254

Query: 108 TVVDVIAEDGKSVSVDTPLFVIEP 131
           T+ +++ EDGK VSVD PLFVI P
Sbjct: 255 TIAEILVEDGKPVSVDLPLFVIVP 278


>Medtr7g013100.1 | biotin carboxyl carrier acetyl-CoA carboxylase |
           HC | chr7:3720376-3725453 | 20130731
          Length = 287

 Score =  108 bits (271), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 59/84 (70%)

Query: 48  KSAKSSHPPLKSPMAGTFYRSPAPGEPAFXXXXXXXXXXXXLCIIEAMKLMNEIEADQSG 107
           K+  SSHP LK PMAGTFYR P PGEP F            +CIIEAMKLMNEIEAD+SG
Sbjct: 204 KTNASSHPQLKCPMAGTFYRCPGPGEPPFVKVGDQVQKGQVVCIIEAMKLMNEIEADRSG 263

Query: 108 TVVDVIAEDGKSVSVDTPLFVIEP 131
           T+V+V+ EDGK VSV  PLF I P
Sbjct: 264 TIVEVLVEDGKPVSVGMPLFAIAP 287