Miyakogusa Predicted Gene

Lj1g3v2837040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2837040.1 tr|A8IVH2|A8IVH2_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CGL52 PE=4 SV=1,29.12,1e-18,seg,NULL;
DUF2358,Protein of unknown function DUF2358,CUFF.29575.1
         (309 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g080220.1 | DUF2358 family protein | HC | chr7:30494307-30...   417   e-117
Medtr7g080220.2 | DUF2358 family protein | HC | chr7:30494315-30...   369   e-102

>Medtr7g080220.1 | DUF2358 family protein | HC |
           chr7:30494307-30497675 | 20130731
          Length = 308

 Score =  417 bits (1073), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/276 (75%), Positives = 230/276 (83%), Gaps = 2/276 (0%)

Query: 36  TCMPFSLRLHQHHHSFLLRVANDADRTELPSDAATETSYSDV-DKIVDGLDFGELCNDFE 94
           TC PFS R H HHHS  LRVANDADRTEL SD  TE SYSD  DK+VD +DFGELCN+FE
Sbjct: 33  TCTPFSFRHHHHHHSSSLRVANDADRTELSSDTTTENSYSDAADKMVDSMDFGELCNEFE 92

Query: 95  CISSPLVESTARQLVRDILELREGNRALGTFAFSVRYKDPIRSFTGRDKYKRSLWATSAL 154
           C SSP VESTARQL RDI ELR GNRALGT+A SV YKDPIRSF+GR+KYKR LWA +AL
Sbjct: 93  CNSSPSVESTARQLARDIFELRSGNRALGTYAVSVTYKDPIRSFSGREKYKRPLWAITAL 152

Query: 155 ENPSVTVQEMVMLSTSVLSIKWTMKGKPKSFIARVGGDVILRITSKFTLNQISGQVIEHE 214
           ENPSVTVQEM MLSTSVLSIKWT++GKPKS +A VGG +ILR+TSKFTLNQISGQVI+HE
Sbjct: 153 ENPSVTVQEMTMLSTSVLSIKWTIRGKPKSILAGVGGGLILRVTSKFTLNQISGQVIKHE 212

Query: 215 EFWDLXXXXXXXXXFFWTSRALFATVESVKDLGDSAKNMSSNFESEK-ENLEIYPDPSGD 273
           E WDL         FFW+SR LFATVESVKDL DSAKN+S++F ++K EN +IYPDPSGD
Sbjct: 213 ELWDLSSSPASAQAFFWSSRVLFATVESVKDLADSAKNLSASFSTKKEENSDIYPDPSGD 272

Query: 274 PTKFFQRDDSFQQDVYQIALFLAILYFVVQFLRTTL 309
           PTKFFQRDD FQQDV QIAL LA++YFVVQ LR TL
Sbjct: 273 PTKFFQRDDGFQQDVLQIALLLAVIYFVVQALRITL 308


>Medtr7g080220.2 | DUF2358 family protein | HC |
           chr7:30494315-30497320 | 20130731
          Length = 231

 Score =  369 bits (946), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/231 (75%), Positives = 197/231 (85%), Gaps = 1/231 (0%)

Query: 80  IVDGLDFGELCNDFECISSPLVESTARQLVRDILELREGNRALGTFAFSVRYKDPIRSFT 139
           +VD +DFGELCN+FEC SSP VESTARQL RDI ELR GNRALGT+A SV YKDPIRSF+
Sbjct: 1   MVDSMDFGELCNEFECNSSPSVESTARQLARDIFELRSGNRALGTYAVSVTYKDPIRSFS 60

Query: 140 GRDKYKRSLWATSALENPSVTVQEMVMLSTSVLSIKWTMKGKPKSFIARVGGDVILRITS 199
           GR+KYKR LWA +ALENPSVTVQEM MLSTSVLSIKWT++GKPKS +A VGG +ILR+TS
Sbjct: 61  GREKYKRPLWAITALENPSVTVQEMTMLSTSVLSIKWTIRGKPKSILAGVGGGLILRVTS 120

Query: 200 KFTLNQISGQVIEHEEFWDLXXXXXXXXXFFWTSRALFATVESVKDLGDSAKNMSSNFES 259
           KFTLNQISGQVI+HEE WDL         FFW+SR LFATVESVKDL DSAKN+S++F +
Sbjct: 121 KFTLNQISGQVIKHEELWDLSSSPASAQAFFWSSRVLFATVESVKDLADSAKNLSASFST 180

Query: 260 EK-ENLEIYPDPSGDPTKFFQRDDSFQQDVYQIALFLAILYFVVQFLRTTL 309
           +K EN +IYPDPSGDPTKFFQRDD FQQDV QIAL LA++YFVVQ LR TL
Sbjct: 181 KKEENSDIYPDPSGDPTKFFQRDDGFQQDVLQIALLLAVIYFVVQALRITL 231